Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- plastid 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0193300-01 | Rice | mitochondrion | 52.63 | 57.29 |
| Os02t0193200-01 | Rice | mitochondrion | 52.63 | 55.0 |
| GSMUA_Achr9P12270_001 | Banana | cytosol | 30.14 | 34.24 |
| Os03t0740200-00 | Rice | plastid | 25.36 | 31.18 |
| Os09t0492900-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 25.36 | 28.96 |
| VIT_18s0122g00300.t01 | Wine grape | plastid | 25.84 | 28.27 |
| Os03t0768900-00 | Rice | cytosol | 23.45 | 27.84 |
| PGSC0003DMT400025724 | Potato | cytosol, plastid | 25.36 | 27.04 |
| Solyc04g082960.1.1 | Tomato | cytosol | 23.45 | 26.2 |
| CDY33663 | Canola | cytosol | 25.84 | 26.09 |
| Bra003714.1-P | Field mustard | cytosol | 25.84 | 25.71 |
| CDX68092 | Canola | cytosol, plastid | 25.84 | 25.71 |
| AT1G21010.1 | Thale cress | cytosol | 25.36 | 25.24 |
| CDX96609 | Canola | cytosol | 25.36 | 25.24 |
| Bra016439.1-P | Field mustard | cytosol | 25.36 | 25.24 |
| CDX85960 | Canola | cytosol | 24.88 | 25.0 |
| Bra025866.1-P | Field mustard | cytosol | 25.36 | 25.0 |
| CDY01339 | Canola | nucleus | 24.4 | 24.64 |
| Bra012264.1-P | Field mustard | cytosol | 24.4 | 24.64 |
| CDY00357 | Canola | nucleus | 23.92 | 24.15 |
| AT1G76600.1 | Thale cress | nucleus | 24.88 | 24.07 |
| CDY45978 | Canola | nucleus | 24.4 | 24.06 |
| Bra008267.1-P | Field mustard | nucleus | 24.4 | 24.06 |
| CDY20399 | Canola | nucleus, plastid | 24.4 | 23.94 |
| CDY04592 | Canola | plastid | 25.84 | 22.41 |
| CDY06423 | Canola | cytosol | 17.22 | 22.36 |
| Os07t0123100-00 | Rice | extracellular | 21.53 | 21.95 |
| CDY29485 | Canola | plastid | 25.36 | 21.9 |
| Os09t0493000-01 | Rice | plastid | 5.26 | 5.47 |
Protein Annotations
| EnsemblPlants:Os02t0193100-01 | EnsemblPlantsGene:Os02g0193100 | EntrezGene:4328589 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DUF4228_plant | PANTHER:PTHR33052 | PANTHER:PTHR33052:SF25 | PFAM:PF14009 | ProteinID:BAD15392.1 | ProteinID:BAF08081.1 |
| ProteinID:BAS77423.1 | ProteinID:EAZ22061.1 | RefSeq:XP_015624998.1 | SEG:seg | UniParc:UPI0000358A13 | UniProt:Q7F8S4 |
| MapMan:35.2 | : | : | : | : | : |
Description
Conserved hypothetical protein. (Os02t0193100-01)
Coordinates
chr2:-:5183536..5184380
Molecular Weight (calculated)
22079.4 Da
IEP (calculated)
8.055
GRAVY (calculated)
-0.243
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSKLSCIYR PESDIVVESE APAPPPPPAR VIAADGSLRE LPASPCVAVV SDVLGGGDDA ASFFVCNSDA LYFDDRPPAL SPGEPLRPGE LYFVLPRAML
101: GRPLSSADMG RLAVRASLAL VGERPQRRRR HRQGGGKKQK KKVHVMPAQA QSRDDGDGDV DGVFNEKLNE QTLGVFAVFL SPARGAAPAA AAAARSPLKR
201: ALSLVEEEA
101: GRPLSSADMG RLAVRASLAL VGERPQRRRR HRQGGGKKQK KKVHVMPAQA QSRDDGDGDV DGVFNEKLNE QTLGVFAVFL SPARGAAPAA AAAARSPLKR
201: ALSLVEEEA
001: MGLCVSVNRN EYVSSSTTAK IVTINGDLRE YDVPVLASQV LESESTSSSS SSSSSSYFLC NSDSLYYDDF IPAIESDEIL QANQIYFVLP ISKRQYRLSA
101: SDMAALAVKA SVAIEKAAGK KNRRRRSGRI SPVVTLNQAN DNRIAAVNNR IGGEATNMMM QKGKLPNRTT PFKDTNGYSR SGSVRKLKRY TSGRAKLAVR
201: SFRLRLSTIY EGSSFN
101: SDMAALAVKA SVAIEKAAGK KNRRRRSGRI SPVVTLNQAN DNRIAAVNNR IGGEATNMMM QKGKLPNRTT PFKDTNGYSR SGSVRKLKRY TSGRAKLAVR
201: SFRLRLSTIY EGSSFN
Arabidopsis Description
Poly polymerase [Source:UniProtKB/TrEMBL;Acc:Q9C9J8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.