Factsheet for GSMUA_Achr9P12270_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G158200.1	Wheat	plastid	25.54	43.93
TraesCS6D01G157700.1	Wheat	plastid	39.13	36.73
HORVU6Hr1G034380.1	Barley	plastid	36.96	35.6
GSMUA_Achr2P08730_001	Banana	cytosol	32.07	35.54
TraesCS6D01G158000.1	Wheat	plastid	36.41	35.08
Os02t0193200-01	Rice	mitochondrion	38.04	35.0
TraesCS6A01G168600.1	Wheat	plastid	37.5	34.85
TraesCS6B01G196600.1	Wheat	plastid	36.96	34.69
GSMUA_Achr7P27420_001	Banana	cytosol	30.98	34.55
TraesCS6A01G168500.1	Wheat	mitochondrion	34.78	34.41
TraesCS7B01G296700.1	Wheat	plastid	35.87	34.38
Os02t0193300-01	Rice	mitochondrion	35.87	34.38
TraesCS6B01G196500.1	Wheat	plastid	35.33	34.21
TraesCS6D01G157600.1	Wheat	plastid	34.78	33.68
TraesCS6D01G158100.1	Wheat	plastid	33.7	33.51
VIT_18s0122g00300.t01	Wine grape	plastid	34.24	32.98
AT1G21010.1	Thale cress	cytosol	37.5	32.86
EES06442	Sorghum	plastid	36.41	32.84
TraesCS7A01G394600.1	Wheat	plastid	34.78	32.65
TraesCS7D01G390200.1	Wheat	mitochondrion, plastid	34.78	32.65
TraesCS7A01G394700.1	Wheat	mitochondrion, plastid	35.33	32.5
TraesCS7D01G390000.1	Wheat	plastid	34.24	32.14
Solyc04g082960.1.1	Tomato	cytosol	32.61	32.09
Zm00001d046687_P001	Maize	plastid	36.41	32.06
CDY20399	Canola	nucleus, plastid	36.96	31.92
TraesCS7B01G296600.1	Wheat	plastid	33.7	31.79
PGSC0003DMT400025724	Potato	cytosol, plastid	33.7	31.63
HORVU6Hr1G034360.1	Barley	mitochondrion, plastid	29.89	31.43
CDY01339	Canola	nucleus	35.33	31.4
Zm00001d015867_P001	Maize	plastid	36.41	31.31
Bra025866.1-P	Field mustard	cytosol	35.87	31.13
AT1G76600.1	Thale cress	nucleus	36.41	31.02
Zm00001d036787_P001	Maize	plastid	36.41	30.88
CDY45978	Canola	nucleus	35.33	30.66
Bra008267.1-P	Field mustard	nucleus	35.33	30.66
Os02t0193100-01	Rice	cytosol, peroxisome, plastid	34.24	30.14
HORVU7Hr1G093050.1	Barley	mitochondrion, plastid	34.24	29.72
EER88673	Sorghum	plastid	36.96	29.57
OQU84553	Sorghum	plastid	32.61	29.56
Bra003714.1-P	Field mustard	cytosol	33.7	29.52
CDY00357	Canola	nucleus	33.15	29.47
Bra012264.1-P	Field mustard	cytosol	33.15	29.47
CDY33663	Canola	cytosol	33.15	29.47
HORVU7Hr1G093080.1	Barley	plastid	33.7	29.38
CDX85960	Canola	cytosol	33.15	29.33
CDX68092	Canola	cytosol, plastid	33.15	29.05
CDX96609	Canola	cytosol	32.61	28.57
Bra016439.1-P	Field mustard	cytosol	32.61	28.57
TraesCS7D01G390100.1	Wheat	plastid	35.87	27.62
CDY04592	Canola	plastid	35.87	27.39
CDY29485	Canola	plastid	35.87	27.27
CDY06423	Canola	cytosol	21.74	24.84
HORVU6Hr1G034350.1	Barley	cytosol	26.63	23.33

Protein Annotations

EnsemblPlants:GSMUA_Achr9P12270_001	EnsemblPlants:GSMUA_Achr9T12270_001	EnsemblPlantsGene:GSMUA_Achr9G12270_001	InterPro:DUF4228_plant	PANTHER:PTHR33052	PANTHER:PTHR33052:SF15
PFAM:PF14009	UniParc:UPI000294F852	UniProt:M0TZN6	MapMan:35.2	:	:

Description

Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G12270_001]

Coordinates

chr9:-:8005992..8006682

Molecular Weight (calculated)

20244.2 Da

IEP (calculated)

7.959

GRAVY (calculated)

-0.335

Length

184 amino acids

Sequence
(BLAST)

001: MGSCFSFAFA STAETPSPVT AKVITLDGSL SEFSTEVKVY EVLGRHHPSC FICSSDELYC NTYIPALGSK ESLQLGQLYF MLPVSKLEYP LSGSDMAALA
101: VKASMAIQPL ASRHRDHGRR TVQVMPIAAE LAGLDALENN GDDYRSRSLE KKKTMPKRSA SNRAKLGQRR RGMERMSTIE EDAE

Best Arabidopsis Sequence Match ( AT1G21010.1 )
(BLAST)

001: MGICVSFRRE DSNSSPTVKI VTVNGDLREY NVPVIASQVL EAESAAAYSS SSSSRPSSYF ICDSDSLYYD DFIPAIKSEE PLQADQIYFV LPISKRQSRL
101: TASDMAALAV KASVAIQNSV KKESRRRKKV RISPVMMLTG SNDSVNGNGS ETTVKKGRPF VSKTAPVKAS SGINRSGSVR NLRRYTSKRA KLAVRSFRLK
201: LSTIYEGSVV

Arabidopsis Description

At1g21010 [Source:UniProtKB/TrEMBL;Acc:Q7XJ58]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.