Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G196500.1 | Wheat | plastid | 83.43 | 76.84 |
| TraesCS6A01G168500.1 | Wheat | mitochondrion | 81.14 | 76.34 |
| TraesCS6D01G157600.1 | Wheat | plastid | 82.86 | 76.32 |
| TraesCS6D01G158100.1 | Wheat | plastid | 80.57 | 76.22 |
| HORVU6Hr1G034380.1 | Barley | plastid | 82.86 | 75.92 |
| TraesCS6D01G158000.1 | Wheat | plastid | 80.57 | 73.82 |
| Os02t0193300-01 | Rice | mitochondrion | 61.14 | 55.73 |
| Os02t0193200-01 | Rice | mitochondrion | 62.86 | 55.0 |
| HORVU6Hr1G034350.1 | Barley | cytosol | 63.43 | 52.86 |
| Zm00001d015867_P001 | Maize | plastid | 61.14 | 50.0 |
| OQU84553 | Sorghum | plastid | 53.14 | 45.81 |
| HORVU7Hr1G093050.1 | Barley | mitochondrion, plastid | 51.43 | 42.45 |
| HORVU7Hr1G093080.1 | Barley | plastid | 49.14 | 40.76 |
| GSMUA_Achr9P12270_001 | Banana | cytosol | 31.43 | 29.89 |
| HORVU5Hr1G098290.1 | Barley | cytosol | 29.14 | 28.98 |
| HORVU5Hr1G074010.1 | Barley | plastid | 30.29 | 28.8 |
| HORVU5Hr1G098280.1 | Barley | cytosol | 28.57 | 28.41 |
| VIT_18s0122g00300.t01 | Wine grape | plastid | 29.71 | 27.23 |
| HORVU2Hr1G061800.1 | Barley | plastid | 29.14 | 26.84 |
| HORVU1Hr1G094330.1 | Barley | cytosol | 28.0 | 26.2 |
| HORVU5Hr1G093900.1 | Barley | plastid | 25.14 | 25.14 |
| Solyc04g082960.1.1 | Tomato | cytosol | 26.29 | 24.6 |
| CDY33663 | Canola | cytosol | 28.57 | 24.15 |
| PGSC0003DMT400025724 | Potato | cytosol, plastid | 26.86 | 23.98 |
| Bra016439.1-P | Field mustard | cytosol | 28.57 | 23.81 |
| CDX96609 | Canola | cytosol | 28.57 | 23.81 |
| AT1G21010.1 | Thale cress | cytosol | 28.0 | 23.33 |
| AT1G76600.1 | Thale cress | nucleus | 28.57 | 23.15 |
| Bra025866.1-P | Field mustard | cytosol | 28.0 | 23.11 |
| Bra003714.1-P | Field mustard | cytosol | 27.43 | 22.86 |
| CDY45978 | Canola | nucleus | 27.43 | 22.64 |
| Bra008267.1-P | Field mustard | nucleus | 27.43 | 22.64 |
| CDY20399 | Canola | nucleus, plastid | 27.43 | 22.54 |
| HORVU5Hr1G098260.1 | Barley | cytosol, mitochondrion | 27.43 | 22.43 |
| CDX68092 | Canola | cytosol, plastid | 26.86 | 22.38 |
| HORVU5Hr1G074030.1 | Barley | cytosol, mitochondrion | 29.71 | 22.22 |
| CDX85960 | Canola | cytosol | 26.29 | 22.12 |
| HORVU5Hr1G074020.1 | Barley | nucleus | 30.29 | 21.99 |
| CDY01339 | Canola | nucleus | 25.71 | 21.74 |
| CDY00357 | Canola | nucleus | 25.14 | 21.26 |
| Bra012264.1-P | Field mustard | cytosol | 24.57 | 20.77 |
| CDY04592 | Canola | plastid | 28.0 | 20.33 |
| CDY29485 | Canola | plastid | 28.0 | 20.25 |
| CDY06423 | Canola | cytosol | 18.29 | 19.88 |
| HORVU2Hr1G061850.1 | Barley | extracellular, plastid | 16.0 | 14.14 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G034360.1 | EnsemblPlantsGene:HORVU6Hr1G034360 | InterPro:DUF4228_plant | PANTHER:PTHR33052 | PANTHER:PTHR33052:SF25 | PFAM:PF14009 |
| SEG:seg | UniParc:UPI000B46952E | UniProt:A0A287TW62 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chrchr6H:+:160082045..160083221
Molecular Weight (calculated)
18533.1 Da
IEP (calculated)
9.919
GRAVY (calculated)
-0.231
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAKLSCSST HRGTLSQQPH HPAPVRVIAA DGSLKELPAS PGVTVSDVLG GDATSFFVCN SDALYFNEPP PALAYDELHR PGQIYFLLPA AVLGRPLSSA
101: DMAALAVRAT AAKRPERRGD SEDVLFNVKL NERTLGEFAV SVSPAKKSNG KLAVRSRLRL KRAPSSASER HTGGC
101: DMAALAVRAT AAKRPERRGD SEDVLFNVKL NERTLGEFAV SVSPAKKSNG KLAVRSRLRL KRAPSSASER HTGGC
001: MGACASRESL RSDSAKLILL DGTLQEFSSP VKVWQILQKN PTSFVCNSDE MDFDDAVSAV AGNEELRSGQ LYFVLPLTWL NHPLRAEEMA ALAVKASSAL
101: TKSGGVGWVS GDDDVTTSEK TYQKKNIAGV KTNGGGGRGC GKGKRRFTAN LSTIAE
101: TKSGGVGWVS GDDDVTTSEK TYQKKNIAGV KTNGGGGRGC GKGKRRFTAN LSTIAE
Arabidopsis Description
Uncharacterized protein At5g66580 [Source:UniProtKB/TrEMBL;Acc:Q9FJY2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.