Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES06442 | Sorghum | plastid | 77.1 | 80.88 |
| TraesCS6D01G158200.1 | Wheat | plastid | 34.11 | 68.22 |
| TraesCS6A01G168500.1 | Wheat | mitochondrion | 57.94 | 66.67 |
| TraesCS6B01G196500.1 | Wheat | plastid | 58.88 | 66.32 |
| TraesCS6D01G158000.1 | Wheat | plastid | 58.88 | 65.97 |
| TraesCS6D01G158100.1 | Wheat | plastid | 56.54 | 65.41 |
| TraesCS6D01G157600.1 | Wheat | plastid | 57.94 | 65.26 |
| TraesCS6B01G196600.1 | Wheat | plastid | 59.35 | 64.8 |
| Os02t0193200-01 | Rice | mitochondrion | 60.28 | 64.5 |
| HORVU6Hr1G034380.1 | Barley | plastid | 56.54 | 63.35 |
| Os02t0193300-01 | Rice | mitochondrion | 56.54 | 63.02 |
| TraesCS6A01G168600.1 | Wheat | plastid | 57.94 | 62.63 |
| TraesCS6D01G157700.1 | Wheat | plastid | 56.07 | 61.22 |
| HORVU6Hr1G034360.1 | Barley | mitochondrion, plastid | 50.0 | 61.14 |
| Zm00001d046687_P001 | Maize | plastid | 49.07 | 50.24 |
| HORVU6Hr1G034350.1 | Barley | cytosol | 44.86 | 45.71 |
| Zm00001d036787_P001 | Maize | plastid | 46.26 | 45.62 |
| GSMUA_Achr9P12270_001 | Banana | cytosol | 31.31 | 36.41 |
| Zm00001d013311_P001 | Maize | plastid | 22.9 | 30.62 |
| VIT_18s0122g00300.t01 | Wine grape | plastid | 26.64 | 29.84 |
| Zm00001d033943_P001 | Maize | plastid | 21.96 | 28.31 |
| Zm00001d013178_P001 | Maize | cytosol | 24.3 | 27.96 |
| Solyc04g082960.1.1 | Tomato | cytosol | 24.3 | 27.81 |
| Zm00001d007974_P001 | Maize | nucleus | 24.77 | 27.46 |
| PGSC0003DMT400025724 | Potato | cytosol, plastid | 24.3 | 26.53 |
| Zm00001d020967_P001 | Maize | plastid | 28.97 | 26.5 |
| Zm00001d034190_P001 | Maize | cytosol | 22.43 | 26.37 |
| Zm00001d020968_P001 | Maize | plastid | 27.57 | 25.99 |
| Zm00001d018717_P001 | Maize | cytosol | 23.36 | 25.77 |
| Bra003714.1-P | Field mustard | cytosol | 25.23 | 25.71 |
| AT1G21010.1 | Thale cress | cytosol | 25.23 | 25.71 |
| CDY33663 | Canola | cytosol | 24.77 | 25.6 |
| CDX85960 | Canola | cytosol | 24.77 | 25.48 |
| Bra016439.1-P | Field mustard | cytosol | 24.77 | 25.24 |
| CDX68092 | Canola | cytosol, plastid | 24.77 | 25.24 |
| CDX96609 | Canola | cytosol | 24.77 | 25.24 |
| Bra025866.1-P | Field mustard | cytosol | 24.77 | 25.0 |
| CDY01339 | Canola | nucleus | 23.83 | 24.64 |
| Bra008267.1-P | Field mustard | nucleus | 24.3 | 24.53 |
| CDY45978 | Canola | nucleus | 24.3 | 24.53 |
| CDY20399 | Canola | nucleus, plastid | 24.3 | 24.41 |
| CDY06423 | Canola | cytosol | 18.22 | 24.22 |
| AT1G76600.1 | Thale cress | nucleus | 24.3 | 24.07 |
| Bra012264.1-P | Field mustard | cytosol | 22.9 | 23.67 |
| CDY00357 | Canola | nucleus | 22.43 | 23.19 |
| CDY04592 | Canola | plastid | 24.77 | 21.99 |
| CDY29485 | Canola | plastid | 24.77 | 21.9 |
Protein Annotations
| EnsemblPlants:Zm00001d015867_P001 | EnsemblPlants:Zm00001d015867_T001 | EnsemblPlantsGene:Zm00001d015867 | EntrezGene:103626866 | InterPro:DUF4228_plant | PANTHER:PTHR33052 |
| PANTHER:PTHR33052:SF25 | PFAM:PF14009 | ProteinID:AQK69709.1 | SEG:seg | UniParc:UPI0002215484 | UniProt:A0A1D6H4F7 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5:+:127359526..127360170
Molecular Weight (calculated)
22580.1 Da
IEP (calculated)
10.108
GRAVY (calculated)
-0.203
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLKLSCIHQ GSLSRQAHQP ASPAPARVIA ADASLKELPA SSSSSSVSDV LGRSGGDDMA VASSSFFMCN SDALYFNEPP PALPTGEVLR PGQIYFVLPA
101: AMLGRPLSTA DMAALAVRAT TALSSSCKPR RHGRRRARGG GKKKKAVRVV PVREQMEDGG EDAFFNEKLN QQTLGDFGML LLSQAKKDDK LAVAAAAATA
201: RLKRALSIIQ EDAE
101: AMLGRPLSTA DMAALAVRAT TALSSSCKPR RHGRRRARGG GKKKKAVRVV PVREQMEDGG EDAFFNEKLN QQTLGDFGML LLSQAKKDDK LAVAAAAATA
201: RLKRALSIIQ EDAE
001: MGLCVSVNRN EYVSSSTTAK IVTINGDLRE YDVPVLASQV LESESTSSSS SSSSSSYFLC NSDSLYYDDF IPAIESDEIL QANQIYFVLP ISKRQYRLSA
101: SDMAALAVKA SVAIEKAAGK KNRRRRSGRI SPVVTLNQAN DNRIAAVNNR IGGEATNMMM QKGKLPNRTT PFKDTNGYSR SGSVRKLKRY TSGRAKLAVR
201: SFRLRLSTIY EGSSFN
101: SDMAALAVKA SVAIEKAAGK KNRRRRSGRI SPVVTLNQAN DNRIAAVNNR IGGEATNMMM QKGKLPNRTT PFKDTNGYSR SGSVRKLKRY TSGRAKLAVR
201: SFRLRLSTIY EGSSFN
Arabidopsis Description
Poly polymerase [Source:UniProtKB/TrEMBL;Acc:Q9C9J8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.