Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29485 | Canola | plastid | 95.02 | 94.63 |
| AT1G21010.1 | Thale cress | cytosol | 73.44 | 84.29 |
| CDY00357 | Canola | nucleus | 71.78 | 83.57 |
| CDY01339 | Canola | nucleus | 70.95 | 82.61 |
| CDY33663 | Canola | cytosol | 69.71 | 81.16 |
| CDX96609 | Canola | cytosol | 69.71 | 80.0 |
| CDY20399 | Canola | nucleus, plastid | 63.49 | 71.83 |
| CDY45978 | Canola | nucleus | 62.66 | 71.23 |
| CDX85960 | Canola | cytosol | 58.51 | 67.79 |
| CDX68092 | Canola | cytosol, plastid | 58.51 | 67.14 |
| CDY06423 | Canola | cytosol | 35.68 | 53.42 |
| VIT_18s0122g00300.t01 | Wine grape | plastid | 40.25 | 50.79 |
| Solyc04g082960.1.1 | Tomato | cytosol | 35.27 | 45.45 |
| PGSC0003DMT400025724 | Potato | cytosol, plastid | 36.93 | 45.41 |
| TraesCS6D01G158200.1 | Wheat | plastid | 16.6 | 37.38 |
| CDX76853 | Canola | cytosol | 24.9 | 36.59 |
| CDY45243 | Canola | cytosol | 21.16 | 36.43 |
| CDX89594 | Canola | cytosol | 24.48 | 36.2 |
| CDY39665 | Canola | cytosol | 24.48 | 36.2 |
| GSMUA_Achr9P12270_001 | Banana | cytosol | 27.39 | 35.87 |
| CDY42708 | Canola | nucleus | 24.9 | 35.09 |
| CDY46066 | Canola | cytosol | 23.65 | 34.97 |
| CDY22462 | Canola | cytosol, nucleus, plastid | 24.9 | 34.68 |
| CDX72612 | Canola | nucleus | 24.48 | 34.5 |
| CDX77946 | Canola | cytosol | 21.16 | 34.46 |
| CDY24764 | Canola | cytosol, nucleus, plastid | 24.07 | 33.53 |
| CDX73789 | Canola | cytosol | 20.75 | 32.68 |
| CDX75606 | Canola | nucleus | 23.65 | 32.57 |
| CDX81387 | Canola | cytosol | 20.75 | 32.26 |
| CDX90684 | Canola | cytosol, nucleus, plastid | 20.75 | 32.05 |
| CDY55087 | Canola | cytosol | 19.92 | 31.79 |
| CDY18612 | Canola | cytosol | 20.33 | 31.61 |
| CDX69254 | Canola | cytosol | 23.24 | 31.46 |
| CDY28982 | Canola | nucleus | 20.33 | 31.41 |
| CDY28078 | Canola | cytosol | 19.92 | 30.0 |
| TraesCS6D01G158000.1 | Wheat | plastid | 23.65 | 29.84 |
| TraesCS6A01G168600.1 | Wheat | plastid | 24.48 | 29.8 |
| TraesCS6D01G158100.1 | Wheat | plastid | 22.82 | 29.73 |
| Os02t0193300-01 | Rice | mitochondrion | 23.65 | 29.69 |
| TraesCS6D01G157700.1 | Wheat | plastid | 24.07 | 29.59 |
| TraesCS6A01G168500.1 | Wheat | mitochondrion | 22.82 | 29.57 |
| TraesCS6B01G196500.1 | Wheat | plastid | 23.24 | 29.47 |
| HORVU6Hr1G034380.1 | Barley | plastid | 23.24 | 29.32 |
| TraesCS6B01G196600.1 | Wheat | plastid | 23.65 | 29.08 |
| TraesCS6D01G157600.1 | Wheat | plastid | 22.82 | 28.95 |
| Os02t0193200-01 | Rice | mitochondrion | 23.65 | 28.5 |
| HORVU6Hr1G034360.1 | Barley | mitochondrion, plastid | 20.33 | 28.0 |
| EES06442 | Sorghum | plastid | 22.82 | 26.96 |
| TraesCS7D01G390200.1 | Wheat | mitochondrion, plastid | 21.58 | 26.53 |
| TraesCS7D01G390000.1 | Wheat | plastid | 21.58 | 26.53 |
| TraesCS7A01G394600.1 | Wheat | plastid | 21.58 | 26.53 |
| Zm00001d046687_P001 | Maize | plastid | 22.41 | 25.84 |
| Os02t0193100-01 | Rice | cytosol, peroxisome, plastid | 22.41 | 25.84 |
| TraesCS7B01G296700.1 | Wheat | plastid | 20.33 | 25.52 |
| TraesCS7A01G394700.1 | Wheat | mitochondrion, plastid | 21.16 | 25.5 |
| EER88673 | Sorghum | plastid | 24.07 | 25.22 |
| TraesCS7B01G296600.1 | Wheat | plastid | 20.33 | 25.13 |
| Zm00001d036787_P001 | Maize | plastid | 22.41 | 24.88 |
| Zm00001d015867_P001 | Maize | plastid | 21.99 | 24.77 |
| HORVU7Hr1G093080.1 | Barley | plastid | 21.16 | 24.17 |
| OQU84553 | Sorghum | plastid | 20.33 | 24.14 |
| HORVU7Hr1G093050.1 | Barley | mitochondrion, plastid | 21.16 | 24.06 |
| TraesCS7D01G390100.1 | Wheat | plastid | 23.65 | 23.85 |
| HORVU6Hr1G034350.1 | Barley | cytosol | 18.67 | 21.43 |
Protein Annotations
| EnsemblPlants:CDY04592 | EnsemblPlantsGene:GSBRNA2T00119145001 | InterPro:DUF4228_plant | PANTHER:PTHR33052 | PANTHER:PTHR33052:SF15 | PFAM:PF14009 |
| ProteinID:CDY04592 | ProteinID:CDY04592.1 | SEG:seg | UniParc:UPI0004EF4B0C | MapMan:35.2 | : |
Description
BnaC05g16300D
Coordinates
chrLK031956:+:95840..96775
Molecular Weight (calculated)
26203.3 Da
IEP (calculated)
10.658
GRAVY (calculated)
-0.235
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MTNSALRVVS SFVNLSLSQT SSSSFLTSIA MGICVSFHRR DSDSPPTVKI VSVNGDLREY HVPVLASQVL EAESAAASSS SSSSRPSSYF ICDSDSLLYD
101: DFIPAIKLEE PLQAEQIYFV LPVSKRQNRL TASDMAALAV KASVAIQSSA GKESRRRKKV RISPIMMLTQ PNDNAVNGKP SESTVPKGRP LPNKTTPFKA
201: SSGYNRSGSV RSLKRYTSKR AKLAVRSFRL KLSTIYEGTV V
101: DFIPAIKLEE PLQAEQIYFV LPVSKRQNRL TASDMAALAV KASVAIQSSA GKESRRRKKV RISPIMMLTQ PNDNAVNGKP SESTVPKGRP LPNKTTPFKA
201: SSGYNRSGSV RSLKRYTSKR AKLAVRSFRL KLSTIYEGTV V
001: MGICVSFRRE DSNSSPTVKI VTVNGDLREY NVPVIASQVL EAESAAAYSS SSSSRPSSYF ICDSDSLYYD DFIPAIKSEE PLQADQIYFV LPISKRQSRL
101: TASDMAALAV KASVAIQNSV KKESRRRKKV RISPVMMLTG SNDSVNGNGS ETTVKKGRPF VSKTAPVKAS SGINRSGSVR NLRRYTSKRA KLAVRSFRLK
201: LSTIYEGSVV
101: TASDMAALAV KASVAIQNSV KKESRRRKKV RISPVMMLTG SNDSVNGNGS ETTVKKGRPF VSKTAPVKAS SGINRSGSVR NLRRYTSKRA KLAVRSFRLK
201: LSTIYEGSVV
Arabidopsis Description
At1g21010 [Source:UniProtKB/TrEMBL;Acc:Q7XJ58]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.