Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90684 | Canola | cytosol, nucleus, plastid | 96.15 | 96.15 |
| CDX73789 | Canola | cytosol | 87.82 | 89.54 |
| CDY28078 | Canola | cytosol | 91.03 | 88.75 |
| CDX77946 | Canola | cytosol | 83.97 | 88.51 |
| AT3G50800.1 | Thale cress | cytosol, nucleus, plastid | 82.69 | 84.87 |
| CDY45243 | Canola | cytosol | 62.18 | 69.29 |
| CDX81387 | Canola | cytosol | 66.67 | 67.1 |
| CDY18612 | Canola | cytosol | 66.67 | 67.1 |
| CDY55087 | Canola | cytosol | 64.74 | 66.89 |
| CDY42708 | Canola | nucleus | 53.85 | 49.12 |
| CDX89594 | Canola | cytosol | 51.28 | 49.08 |
| CDY39665 | Canola | cytosol | 51.28 | 49.08 |
| CDX72612 | Canola | nucleus | 53.21 | 48.54 |
| CDY46066 | Canola | cytosol | 50.0 | 47.85 |
| CDY24764 | Canola | cytosol, nucleus, plastid | 52.56 | 47.4 |
| CDY22462 | Canola | cytosol, nucleus, plastid | 52.56 | 47.4 |
| CDX76853 | Canola | cytosol | 48.72 | 46.34 |
| CDX75606 | Canola | nucleus | 50.64 | 45.14 |
| CDX69254 | Canola | cytosol | 51.28 | 44.94 |
| GSMUA_Achr7P27420_001 | Banana | cytosol | 43.59 | 41.21 |
| GSMUA_Achr2P08730_001 | Banana | cytosol | 43.59 | 40.96 |
| Zm00001d013311_P001 | Maize | plastid | 33.97 | 33.12 |
| Os03t0740200-00 | Rice | plastid | 35.26 | 32.35 |
| KXG37596 | Sorghum | cytosol, nucleus, plastid | 33.33 | 31.14 |
| TraesCS5A01G379900.1 | Wheat | plastid | 33.33 | 31.14 |
| TraesCS5D01G389400.1 | Wheat | plastid | 33.33 | 30.77 |
| TraesCS5B01G383500.1 | Wheat | plastid | 33.33 | 30.23 |
| TraesCS2B01G276100.1 | Wheat | cytosol, extracellular, plastid | 35.9 | 29.79 |
| TraesCS2A01G266000.1 | Wheat | plastid | 36.54 | 29.69 |
| TraesCS2D01G257800.1 | Wheat | plastid | 36.54 | 29.69 |
| Zm00001d033943_P001 | Maize | plastid | 31.41 | 29.52 |
| TraesCS2D01G257700.1 | Wheat | mitochondrion, nucleus, plastid | 35.26 | 29.26 |
| TraesCS5D01G414100.1 | Wheat | cytosol | 33.33 | 29.05 |
| Os03t0768900-00 | Rice | cytosol | 32.69 | 28.98 |
| HORVU1Hr1G094330.1 | Barley | cytosol | 34.62 | 28.88 |
| EER95817 | Sorghum | nucleus | 35.9 | 28.87 |
| TraesCS2B01G276000.1 | Wheat | cytosol, nucleus, plastid | 34.62 | 28.72 |
| TraesCS5B01G409000.1 | Wheat | cytosol | 31.41 | 28.66 |
| TraesCS1A01G436400.1 | Wheat | plastid | 34.62 | 28.57 |
| TraesCS1D01G444800.1 | Wheat | cytosol, plastid | 33.97 | 28.49 |
| TraesCS2A01G266100.1 | Wheat | cytosol | 30.13 | 28.48 |
| TraesCS1A01G436300.1 | Wheat | mitochondrion | 34.62 | 28.42 |
| TraesCS5D01G414300.1 | Wheat | cytosol | 32.05 | 28.41 |
| TraesCS5D01G414200.1 | Wheat | cytosol | 32.05 | 28.41 |
| Zm00001d034190_P001 | Maize | cytosol | 32.69 | 28.02 |
| TraesCS5A01G404200.1 | Wheat | cytosol | 31.41 | 27.84 |
| TraesCS5A01G404100.1 | Wheat | cytosol | 31.41 | 27.84 |
| HORVU5Hr1G098290.1 | Barley | cytosol | 31.41 | 27.84 |
| HORVU5Hr1G098280.1 | Barley | cytosol | 31.41 | 27.84 |
| TraesCS5B01G408700.1 | Wheat | cytosol | 32.69 | 27.72 |
| TraesCS1B01G471500.1 | Wheat | mitochondrion | 32.69 | 27.57 |
| TraesCS1D01G444700.1 | Wheat | cytosol, extracellular, peroxisome, plastid | 32.69 | 27.42 |
| TraesCS5A01G404000.1 | Wheat | cytosol | 31.41 | 27.37 |
| HORVU2Hr1G061800.1 | Barley | plastid | 33.33 | 27.37 |
| TraesCS5B01G408800.1 | Wheat | cytosol | 30.77 | 27.27 |
| EER93387 | Sorghum | cytosol | 32.69 | 27.13 |
| TraesCS5D01G414000.1 | Wheat | cytosol | 30.77 | 26.82 |
| Zm00001d018717_P001 | Maize | cytosol | 32.69 | 26.29 |
| HORVU5Hr1G093900.1 | Barley | plastid | 29.49 | 26.29 |
| Os07t0123100-00 | Rice | extracellular | 33.97 | 25.85 |
| Zm00001d013178_P001 | Maize | cytosol | 30.77 | 25.81 |
| HORVU5Hr1G098260.1 | Barley | cytosol, mitochondrion | 33.97 | 24.77 |
| CDY33663 | Canola | cytosol | 31.41 | 23.67 |
| CDX96609 | Canola | cytosol | 31.41 | 23.33 |
| CDY01339 | Canola | nucleus | 30.77 | 23.19 |
| CDY00357 | Canola | nucleus | 30.77 | 23.19 |
| CDY45978 | Canola | nucleus | 31.41 | 23.11 |
| CDY20399 | Canola | nucleus, plastid | 31.41 | 23.0 |
| CDX68092 | Canola | cytosol, plastid | 30.77 | 22.86 |
| Zm00001d007974_P001 | Maize | nucleus | 28.21 | 22.8 |
| CDX85960 | Canola | cytosol | 30.13 | 22.6 |
| TraesCS5A01G403900.1 | Wheat | plastid | 31.41 | 21.03 |
| CDY04592 | Canola | plastid | 31.41 | 20.33 |
| CDY29485 | Canola | plastid | 31.41 | 20.25 |
| CDY06423 | Canola | cytosol | 18.59 | 18.01 |
| HORVU2Hr1G061850.1 | Barley | extracellular, plastid | 20.51 | 16.16 |
Protein Annotations
| EnsemblPlants:CDY28982 | EnsemblPlantsGene:GSBRNA2T00041700001 | InterPro:DUF4228_plant | PANTHER:PTHR33052 | PANTHER:PTHR33052:SF17 | PFAM:PF14009 |
| ProteinID:CDY28982 | ProteinID:CDY28982.1 | SEG:seg | UniParc:UPI0004EEB694 | UniProt:A0A078GV32 | MapMan:35.2 |
Description
BnaC07g31880DBnaC07g31880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GV32]
Coordinates
chrLK032229:-:7085..7555
Molecular Weight (calculated)
16615.7 Da
IEP (calculated)
7.756
GRAVY (calculated)
-0.338
Length
156 amino acids
Sequence
(BLAST)
(BLAST)
001: MGACGSSESR RTDTAKLILP DGTLQEFTSP VKVWQILQKN PTSFVCNSDD MNFDDAVLAV GGSEDLRPGE LYFVLPLTWL NHPLRAEEMA ALAVKASSAL
101: SKSGWSCGDD GDARKVSGGE CGRVKRVKRN SCGGRGCGGG GKGWRKFTVE LSSIAE
101: SKSGWSCGDD GDARKVSGGE CGRVKRVKRN SCGGRGCGGG GKGWRKFTVE LSSIAE
001: MGACASRESR RTETAKLILP DGTLQEFSTP VKVWQILQKN PTSFVCNSDD MDFDDAVLAV PGSEDLRPGE LYFVLPLTWL NHPLRADEMA ALAVKASSAL
101: AKSGGGGLSY NDEDVGECRV RRVKRNGCGG RGCGGGGKGR RKFTAELSSI AE
101: AKSGGGGLSY NDEDVGECRV RRVKRNGCGG RGCGGGGKGR RKFTAELSSI AE
Arabidopsis Description
Uncharacterized protein At3g50800 [Source:UniProtKB/TrEMBL;Acc:Q9SVL8]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.