Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G257700.1 | Wheat | mitochondrion, nucleus, plastid | 96.97 | 85.11 |
| TraesCS2B01G276000.1 | Wheat | cytosol, nucleus, plastid | 95.15 | 83.51 |
| HORVU2Hr1G061800.1 | Barley | plastid | 91.52 | 79.47 |
| TraesCS2A01G266000.1 | Wheat | plastid | 88.48 | 76.04 |
| TraesCS1A01G436400.1 | Wheat | plastid | 84.24 | 73.55 |
| TraesCS1A01G436300.1 | Wheat | mitochondrion | 82.42 | 71.58 |
| TraesCS5A01G404200.1 | Wheat | cytosol | 60.0 | 56.25 |
| TraesCS5A01G404100.1 | Wheat | cytosol | 58.18 | 54.55 |
| TraesCS5A01G404000.1 | Wheat | cytosol | 56.36 | 51.96 |
| Os07t0123100-00 | Rice | extracellular | 61.82 | 49.76 |
| Zm00001d018717_P001 | Maize | cytosol | 58.18 | 49.48 |
| EER95817 | Sorghum | nucleus | 56.97 | 48.45 |
| Zm00001d007974_P001 | Maize | nucleus | 53.33 | 45.6 |
| TraesCS5A01G403900.1 | Wheat | plastid | 58.79 | 41.63 |
| TraesCS5A01G379900.1 | Wheat | plastid | 38.18 | 37.72 |
| Solyc02g089990.1.1 | Tomato | nucleus | 31.52 | 32.3 |
| PGSC0003DMT400026013 | Potato | cytosol, nucleus, plastid | 31.52 | 32.1 |
| GSMUA_Achr7P27420_001 | Banana | cytosol | 31.52 | 31.52 |
| CDX77946 | Canola | cytosol | 27.88 | 31.08 |
| AT5G66580.1 | Thale cress | cytosol | 29.09 | 30.77 |
| GSMUA_Achr2P08730_001 | Banana | cytosol | 30.91 | 30.72 |
| CDY45243 | Canola | cytosol | 26.06 | 30.71 |
| Bra036862.1-P | Field mustard | cytosol | 27.27 | 30.41 |
| CDX81387 | Canola | cytosol | 28.48 | 30.32 |
| Bra039208.1-P | Field mustard | cytosol | 25.45 | 30.22 |
| CDY28982 | Canola | nucleus | 28.48 | 30.13 |
| CDX73789 | Canola | cytosol | 27.88 | 30.07 |
| VIT_00s0207g00140.t01 | Wine grape | cytosol | 29.7 | 30.06 |
| Bra012084.1-P | Field mustard | cytosol | 25.45 | 30.0 |
| PGSC0003DMT400059007 | Potato | cytosol, nucleus, plastid | 26.06 | 29.66 |
| Bra012887.1-P | Field mustard | cytosol, nucleus, plastid | 27.88 | 29.49 |
| CDX90684 | Canola | cytosol, nucleus, plastid | 27.88 | 29.49 |
| VIT_00s0207g00180.t01 | Wine grape | cytosol | 29.09 | 29.45 |
| CDY55087 | Canola | cytosol | 26.67 | 29.14 |
| Bra031814.1-P | Field mustard | cytosol | 26.67 | 29.14 |
| Bra037163.1-P | Field mustard | cytosol | 27.27 | 29.03 |
| CDY18612 | Canola | cytosol | 27.27 | 29.03 |
| AT3G50800.1 | Thale cress | cytosol, nucleus, plastid | 26.67 | 28.95 |
| Solyc03g044860.1.1 | Tomato | cytosol | 25.45 | 28.77 |
| CDY28078 | Canola | cytosol | 27.88 | 28.75 |
| PGSC0003DMT400007187 | Potato | cytosol | 26.06 | 28.29 |
| Solyc02g065430.1.1 | Tomato | cytosol | 26.06 | 28.29 |
| TraesCS7A01G394600.1 | Wheat | plastid | 33.33 | 28.06 |
| Bra010578.1-P | Field mustard | cytosol, nucleus, plastid | 24.85 | 27.33 |
| TraesCS6A01G168600.1 | Wheat | plastid | 32.73 | 27.27 |
| TraesCS7A01G394700.1 | Wheat | mitochondrion, plastid | 32.73 | 27.0 |
| Bra032151.1-P | Field mustard | cytosol | 26.67 | 26.99 |
| CDY46066 | Canola | cytosol | 26.67 | 26.99 |
| CDY39665 | Canola | cytosol | 26.67 | 26.99 |
| TraesCS6A01G168500.1 | Wheat | mitochondrion | 30.3 | 26.88 |
| KRH69989 | Soybean | cytosol | 26.67 | 26.67 |
| KRH76906 | Soybean | cytosol | 25.45 | 26.42 |
| CDX89594 | Canola | cytosol | 26.06 | 26.38 |
| AT2G23690.1 | Thale cress | cytosol | 26.06 | 26.38 |
| KRH28562 | Soybean | cytosol | 26.06 | 26.38 |
| Bra017789.1-P | Field mustard | nucleus | 27.27 | 26.32 |
| CDX72612 | Canola | nucleus | 27.27 | 26.32 |
| AT4G37240.1 | Thale cress | cytosol, nucleus, plastid | 26.67 | 26.19 |
| CDY42708 | Canola | nucleus | 26.67 | 25.73 |
| CDX76853 | Canola | cytosol | 25.45 | 25.61 |
| VIT_03s0063g01940.t01 | Wine grape | cytosol | 26.67 | 25.29 |
| KRH08345 | Soybean | cytosol | 26.06 | 25.15 |
| CDY22462 | Canola | cytosol, nucleus, plastid | 26.06 | 24.86 |
| CDY24764 | Canola | cytosol, nucleus, plastid | 26.06 | 24.86 |
| CDX69254 | Canola | cytosol | 26.06 | 24.16 |
| Bra011715.1-P | Field mustard | nucleus | 25.45 | 24.0 |
| CDX75606 | Canola | nucleus | 25.45 | 24.0 |
| TraesCS5A01G269900.1 | Wheat | plastid | 27.88 | 23.83 |
| TraesCS5A01G270000.1 | Wheat | plastid | 30.3 | 23.04 |
| TraesCS5A01G270100.1 | Wheat | plastid | 30.3 | 22.62 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G266100.1 | EnsemblPlantsGene:TraesCS2A01G266100 | InterPro:DUF4228_plant | PANTHER:PTHR33052 | PANTHER:PTHR33052:SF62 | PFAM:PF14009 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr2A:+:423176463..423176960
Molecular Weight (calculated)
17242.6 Da
IEP (calculated)
8.730
GRAVY (calculated)
-0.152
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLLPTGELR EYPRPATAAE ALEDNSVAGD AGWFLCDADA MGFEGPVAAV AGAEELRPGQ IYFVLPAEAR KNGLRREDLA ALAVRASAAL VGKANANASG
101: SGGRRRRAGS VSPLVFAPPP EVDGTLAYKT VQALAAKRRP VARAKSAGRM QPRFSPDLTA IPECE
101: SGGRRRRAGS VSPLVFAPPP EVDGTLAYKT VQALAAKRRP VARAKSAGRM QPRFSPDLTA IPECE
001: MGACASRESL RSDSAKLILL DGTLQEFSSP VKVWQILQKN PTSFVCNSDE MDFDDAVSAV AGNEELRSGQ LYFVLPLTWL NHPLRAEEMA ALAVKASSAL
101: TKSGGVGWVS GDDDVTTSEK TYQKKNIAGV KTNGGGGRGC GKGKRRFTAN LSTIAE
101: TKSGGVGWVS GDDDVTTSEK TYQKKNIAGV KTNGGGGRGC GKGKRRFTAN LSTIAE
Arabidopsis Description
Uncharacterized protein At5g66580 [Source:UniProtKB/TrEMBL;Acc:Q9FJY2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.