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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • cytosol 2
  • nucleus 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus, plastid
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400014123
PGSC0003DMT400018569
PGSC0003DMT400023896
PGSC0003DMT400034833
PGSC0003DMT400042062
PGSC0003DMT400046278
PGSC0003DMT400054299
PGSC0003DMT400058435
PGSC0003DMT400069203
PGSC0003DMT400070437
PGSC0003DMT400097662

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G37240.1 PGSC0003DMT400023896 AT1G22920.1 21798944
AT4G37240.1 PGSC0003DMT400069203 AT1G22920.1 21798944
AT4G37240.1 PGSC0003DMT400014123 AT2G41090.1 17360592
AT4G37240.1 PGSC0003DMT400018569 AT2G41090.1 17360592
AT4G37240.1 PGSC0003DMT400046278 AT2G41090.1 17360592
AT4G37240.1 PGSC0003DMT400054299 AT2G41090.1 17360592
AT4G37240.1 PGSC0003DMT400058435 AT2G41090.1 17360592
AT4G37240.1 PGSC0003DMT400070437 AT2G41090.1 17360592
AT4G37240.1 PGSC0003DMT400097662 AT2G41090.1 17360592
AT4G37240.1 PGSC0003DMT400014123 AT2G41100.1 17360592
AT4G37240.1 PGSC0003DMT400018569 AT2G41100.1 17360592
AT4G37240.1 PGSC0003DMT400046278 AT2G41100.1 17360592
AT4G37240.1 PGSC0003DMT400054299 AT2G41100.1 17360592
AT4G37240.1 PGSC0003DMT400058435 AT2G41100.1 17360592
AT4G37240.1 PGSC0003DMT400070437 AT2G41100.1 17360592
AT4G37240.1 PGSC0003DMT400097662 AT2G41100.1 17360592
AT4G37240.1 PGSC0003DMT400034833 AT4G14640.1 17360592
AT4G37240.1 PGSC0003DMT400042062 AT4G14640.1 17360592
AT4G37240.1 PGSC0003DMT400014123 AT5G21274.1 17360592
AT4G37240.1 PGSC0003DMT400018569 AT5G21274.1 17360592
AT4G37240.1 PGSC0003DMT400046278 AT5G21274.1 17360592
AT4G37240.1 PGSC0003DMT400054299 AT5G21274.1 17360592
AT4G37240.1 PGSC0003DMT400058435 AT5G21274.1 17360592
AT4G37240.1 PGSC0003DMT400070437 AT5G21274.1 17360592
AT4G37240.1 PGSC0003DMT400097662 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc02g065430.1.1 Tomato cytosol 93.42 93.42
PGSC0003DMT400059007 Potato cytosol, nucleus, plastid 59.87 62.76
PGSC0003DMT400026013 Potato cytosol, nucleus, plastid 65.79 61.73
VIT_00s0207g00180.t01 Wine grape cytosol 57.89 53.99
VIT_00s0207g00140.t01 Wine grape cytosol 57.89 53.99
AT2G23690.1 Thale cress cytosol 57.24 53.37
KRH76906 Soybean cytosol 55.26 52.83
CDX89594 Canola cytosol 55.26 51.53
CDY46066 Canola cytosol 55.26 51.53
Bra032151.1-P Field mustard cytosol 54.61 50.92
CDY39665 Canola cytosol 54.61 50.92
CDX76853 Canola cytosol 54.61 50.61
KRH28562 Soybean cytosol 51.97 48.47
CDY24764 Canola cytosol, nucleus, plastid 51.97 45.66
Bra039208.1-P Field mustard cytosol 41.45 45.32
AT4G37240.1 Thale cress cytosol, nucleus, plastid 50.0 45.24
Bra017789.1-P Field mustard nucleus 50.66 45.03
CDY22462 Canola cytosol, nucleus, plastid 50.66 44.51
CDY42708 Canola nucleus 50.0 44.44
CDX72612 Canola nucleus 50.0 44.44
KRH69989 Soybean cytosol 46.71 43.03
GSMUA_Achr2P08730_001 Banana cytosol 46.71 42.77
KRH08345 Soybean cytosol 48.03 42.69
Bra011715.1-P Field mustard nucleus 48.03 41.71
CDX75606 Canola nucleus 48.03 41.71
CDX69254 Canola cytosol 48.68 41.57
GSMUA_Achr7P27420_001 Banana cytosol 44.74 41.21
Bra010578.1-P Field mustard cytosol, nucleus, plastid 40.13 40.67
Zm00001d013311_P001 Maize plastid 33.55 31.88
Os03t0740200-00 Rice plastid 35.53 31.76
TraesCS5A01G379900.1 Wheat plastid 34.87 31.74
TraesCS5B01G383500.1 Wheat plastid 35.53 31.4
TraesCS5D01G389400.1 Wheat plastid 34.87 31.36
PGSC0003DMT400064780 Potato extracellular 31.58 30.97
KXG37596 Sorghum cytosol, nucleus, plastid 33.55 30.54
Zm00001d033943_P001 Maize plastid 32.89 30.12
TraesCS5D01G414200.1 Wheat cytosol 34.87 30.11
TraesCS5A01G404200.1 Wheat cytosol 34.87 30.11
TraesCS5D01G414000.1 Wheat cytosol 34.87 29.61
HORVU5Hr1G098280.1 Barley cytosol 34.21 29.55
TraesCS5A01G404100.1 Wheat cytosol 34.21 29.55
TraesCS5D01G414300.1 Wheat cytosol 33.55 28.98
HORVU5Hr1G098290.1 Barley cytosol 33.55 28.98
TraesCS5B01G408800.1 Wheat cytosol 33.55 28.98
Zm00001d034190_P001 Maize cytosol 34.21 28.57
TraesCS5D01G414100.1 Wheat cytosol 33.55 28.49
TraesCS5B01G409000.1 Wheat cytosol 31.58 28.07
TraesCS5A01G404000.1 Wheat cytosol 32.89 27.93
Os03t0768900-00 Rice cytosol 32.24 27.84
TraesCS5B01G408700.1 Wheat cytosol 33.55 27.72
HORVU5Hr1G093900.1 Barley plastid 31.58 27.43
EER93387 Sorghum cytosol 33.55 27.13
Zm00001d013178_P001 Maize cytosol 32.89 26.88
PGSC0003DMT400025724 Potato cytosol, plastid 34.21 26.53
TraesCS1D01G444800.1 Wheat cytosol, plastid 32.24 26.34
TraesCS1D01G444700.1 Wheat cytosol, extracellular, peroxisome, plastid 32.24 26.34
HORVU1Hr1G094330.1 Barley cytosol 32.24 26.2
TraesCS2D01G257700.1 Wheat mitochondrion, nucleus, plastid 32.24 26.06
TraesCS2B01G276100.1 Wheat cytosol, extracellular, plastid 32.24 26.06
TraesCS2B01G276000.1 Wheat cytosol, nucleus, plastid 32.24 26.06
TraesCS2A01G266100.1 Wheat cytosol 28.29 26.06
TraesCS1B01G471500.1 Wheat mitochondrion 31.58 25.95
TraesCS1A01G436400.1 Wheat plastid 32.24 25.93
TraesCS1A01G436300.1 Wheat mitochondrion 32.24 25.79
HORVU2Hr1G061800.1 Barley plastid 32.24 25.79
TraesCS2A01G266000.1 Wheat plastid 32.24 25.52
TraesCS2D01G257800.1 Wheat plastid 31.58 25.0
Os07t0123100-00 Rice extracellular 32.89 24.39
HORVU5Hr1G098260.1 Barley cytosol, mitochondrion 33.55 23.83
EER95817 Sorghum nucleus 29.61 23.2
TraesCS5A01G403900.1 Wheat plastid 34.87 22.75
Zm00001d018717_P001 Maize cytosol 28.29 22.16
Zm00001d007974_P001 Maize nucleus 26.32 20.73
HORVU2Hr1G061850.1 Barley extracellular, plastid 21.05 16.16
Protein Annotations
EnsemblPlants:PGSC0003DMT400007187EnsemblPlantsGene:PGSC0003DMG400002780EntrezGene:102597937InterPro:DUF4228_plantPANTHER:PTHR33052PANTHER:PTHR33052:SF17
PFAM:PF14009PGSC:PGSC0003DMG400002780RefSeq:XP_006344820.1SEG:segUniParc:UPI0002967E82UniProt:M0ZSL9
MapMan:35.2:::::
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400002780]
Coordinates
chr2:+:24429946..24430925
Molecular Weight (calculated)
16680.0 Da
IEP (calculated)
8.062
GRAVY (calculated)
-0.226
Length
152 amino acids
Sequence
(BLAST)
001: MGIICSSYES TSVATAKLIL HDGRLQEFSY PIKASFLLQN DPTIFICNSD EMDFGNVVCA VKAEEELQLG QLYFALPLSQ LKHKLKAEEM AALAVKASSA
101: LNHSSSSGEK FIVFEKSGPN FSKKMVDVNN DPTPKGNGRR KKFTAKLSSI NE
Best Arabidopsis Sequence Match ( AT2G23690.1 )
(BLAST)
001: MGICSSYEST QVATAKLILH DGRMMEFTSP VKVGYVLQKN PMCFICNSDD MDFDNVVSAI SADEEFQLGQ LYFALPLSSL HHSLKAEEMA ALAVKASSAL
101: MRSGGSCGRD KCRCRRKCVS PVIFSARRVA AVGANGETRN GKRRGGGGSG RRKYAAKLSK IEE
Arabidopsis Description
HTH-type transcriptional regulator [Source:UniProtKB/TrEMBL;Acc:Q680G2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.