Factsheet for Os03t0768900-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0267900-01
Os01t0279300-01
Os01t0810300-01
Os03t0319300-01
Os03t0743500-02
Os04t0654700-02
Os05t0491000-01
Os05t0491100-01
Os07t0687200-02
Os12t0603800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G37240.1	Os04t0654700-02	AT1G22920.1	21798944
AT4G37240.1	Os01t0267900-01	AT2G41090.1	17360592
AT4G37240.1	Os01t0279300-01	AT2G41090.1	17360592
AT4G37240.1	Os01t0810300-01	AT2G41090.1	17360592
AT4G37240.1	Os03t0319300-01	AT2G41090.1	17360592
AT4G37240.1	Os05t0491000-01	AT2G41090.1	17360592
AT4G37240.1	Os05t0491100-01	AT2G41090.1	17360592
AT4G37240.1	Os07t0687200-02	AT2G41090.1	17360592
AT4G37240.1	Os12t0603800-00	AT2G41090.1	17360592
AT4G37240.1	Os01t0267900-01	AT2G41100.1	17360592
AT4G37240.1	Os01t0279300-01	AT2G41100.1	17360592
AT4G37240.1	Os01t0810300-01	AT2G41100.1	17360592
AT4G37240.1	Os03t0319300-01	AT2G41100.1	17360592
AT4G37240.1	Os05t0491000-01	AT2G41100.1	17360592
AT4G37240.1	Os05t0491100-01	AT2G41100.1	17360592
AT4G37240.1	Os07t0687200-02	AT2G41100.1	17360592
AT4G37240.1	Os12t0603800-00	AT2G41100.1	17360592
AT4G37240.1	Os03t0743500-02	AT4G14640.1	17360592
AT4G37240.1	Os01t0267900-01	AT5G21274.1	17360592
AT4G37240.1	Os01t0279300-01	AT5G21274.1	17360592
AT4G37240.1	Os01t0810300-01	AT5G21274.1	17360592
AT4G37240.1	Os03t0319300-01	AT5G21274.1	17360592
AT4G37240.1	Os05t0491000-01	AT5G21274.1	17360592
AT4G37240.1	Os05t0491100-01	AT5G21274.1	17360592
AT4G37240.1	Os07t0687200-02	AT5G21274.1	17360592
AT4G37240.1	Os12t0603800-00	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034190_P001	Maize	cytosol	72.16	69.78
TraesCS5D01G414300.1	Wheat	cytosol	68.18	68.18
TraesCS5D01G414200.1	Wheat	cytosol	67.61	67.61
TraesCS5A01G404200.1	Wheat	cytosol	67.61	67.61
HORVU5Hr1G098290.1	Barley	cytosol	67.61	67.61
HORVU5Hr1G098280.1	Barley	cytosol	67.61	67.61
TraesCS5D01G414000.1	Wheat	cytosol	67.61	66.48
Zm00001d013178_P001	Maize	cytosol	69.89	66.13
TraesCS5B01G409000.1	Wheat	cytosol	64.2	66.08
EER93387	Sorghum	cytosol	70.45	65.96
TraesCS5D01G414100.1	Wheat	cytosol	66.48	65.36
TraesCS5B01G408700.1	Wheat	cytosol	68.18	65.22
TraesCS5A01G404000.1	Wheat	cytosol	65.91	64.8
TraesCS5A01G404100.1	Wheat	cytosol	64.77	64.77
TraesCS5B01G408800.1	Wheat	cytosol	64.2	64.2
HORVU5Hr1G098260.1	Barley	cytosol, mitochondrion	65.91	54.21
TraesCS5A01G403900.1	Wheat	plastid	66.48	50.21
Os07t0123100-00	Rice	extracellular	55.68	47.8
Os03t0740200-00	Rice	plastid	44.32	45.88
GSMUA_Achr2P08730_001	Banana	cytosol	38.64	40.96
GSMUA_Achr7P27420_001	Banana	cytosol	38.07	40.61
PGSC0003DMT400026013	Potato	cytosol, nucleus, plastid	35.23	38.27
Solyc02g089990.1.1	Tomato	nucleus	34.66	37.89
Bra012084.1-P	Field mustard	cytosol	28.98	36.43
CDY45243	Canola	cytosol	28.98	36.43
VIT_00s0207g00140.t01	Wine grape	cytosol	32.95	35.58
VIT_00s0207g00180.t01	Wine grape	cytosol	32.95	35.58
CDX77946	Canola	cytosol	29.55	35.14
KRH76906	Soybean	cytosol	31.25	34.59
PGSC0003DMT400059007	Potato	cytosol, nucleus, plastid	28.41	34.48
Bra036862.1-P	Field mustard	cytosol	28.98	34.46
KRH28562	Soybean	cytosol	31.82	34.36
Solyc03g044860.1.1	Tomato	cytosol	28.41	34.25
CDX73789	Canola	cytosol	29.55	33.99
AT3G50800.1	Thale cress	cytosol, nucleus, plastid	28.98	33.55
CDX81387	Canola	cytosol	29.55	33.55
KRH08345	Soybean	cytosol	32.39	33.33
CDY28982	Canola	nucleus	28.98	32.69
CDY55087	Canola	cytosol	27.84	32.45
Bra031814.1-P	Field mustard	cytosol	27.84	32.45
Bra037163.1-P	Field mustard	cytosol	28.41	32.26
CDY18612	Canola	cytosol	28.41	32.26
Solyc02g065430.1.1	Tomato	cytosol	27.84	32.24
PGSC0003DMT400007187	Potato	cytosol	27.84	32.24
AT4G37240.1	Thale cress	cytosol, nucleus, plastid	30.68	32.14
Bra012887.1-P	Field mustard	cytosol, nucleus, plastid	28.41	32.05
CDX90684	Canola	cytosol, nucleus, plastid	28.41	32.05
Bra017789.1-P	Field mustard	nucleus	30.68	31.58
AT5G66580.1	Thale cress	cytosol	27.84	31.41
CDY39665	Canola	cytosol	28.98	31.29
Bra032151.1-P	Field mustard	cytosol	28.98	31.29
CDY46066	Canola	cytosol	28.98	31.29
CDX72612	Canola	nucleus	30.11	30.99
CDY42708	Canola	nucleus	30.11	30.99
KRH69989	Soybean	cytosol	28.98	30.91
CDX89594	Canola	cytosol	28.41	30.67
AT2G23690.1	Thale cress	cytosol	28.41	30.67
CDY28078	Canola	cytosol	27.84	30.62
CDX76853	Canola	cytosol	28.41	30.49
VIT_03s0063g01940.t01	Wine grape	cytosol	30.11	30.46
Bra039208.1-P	Field mustard	cytosol	23.86	30.22
CDY22462	Canola	cytosol, nucleus, plastid	29.55	30.06
Os02t0193300-01	Rice	mitochondrion	32.39	29.69
CDX69254	Canola	cytosol	29.55	29.21
CDX75606	Canola	nucleus	28.98	29.14
Bra011715.1-P	Field mustard	nucleus	28.98	29.14
Os02t0193200-01	Rice	mitochondrion	32.95	29.0
CDY24764	Canola	cytosol, nucleus, plastid	28.41	28.9
Bra010578.1-P	Field mustard	cytosol, nucleus, plastid	23.86	28.0
Os09t0492900-00	Rice	cytosol, mitochondrion, nucleus, plastid	26.7	25.68
Os02t0193100-01	Rice	cytosol, peroxisome, plastid	27.84	23.45
Os09t0493000-01	Rice	plastid	6.25	5.47

Protein Annotations

EnsemblPlants:Os03t0768900-00	EnsemblPlantsGene:Os03g0768900	EntrezGene:4334245	InterPro:DUF4228_plant	PANTHER:PTHR33052	PANTHER:PTHR33052:SF63
PFAM:PF14009	ProteinID:BAS86573.1	RefSeq:XP_015632109.1	SEG:seg	UniParc:UPI00018F14B9	UniProt:A0A0P0W405
MapMan:35.2	:	:	:	:	:

Description

Hypothetical conserved gene. (Os03t0768900-00)

Coordinates

chr3:+:31824161..31824936

Molecular Weight (calculated)

18166.6 Da

IEP (calculated)

6.005

GRAVY (calculated)

-0.001

Length

176 amino acids

Sequence
(BLAST)

001: MGICVSCDAV AEGAATARVV MPGGELREYS QPATAAMALE EAGEGWFLCD ADGVGFEGRV VAVPGDEELR PGQIYFVLHP EARRRSLTRE EVAALAVKAS
101: AALVKAAAAA AASSPAGGRR RRGAVAPLVF PLPEEDDTAV AAAAPKPAVA RKRRVASRGV RASKFSPDLT AIPESE

Best Arabidopsis Sequence Match ( AT1G76600.1 )
(BLAST)

001: MGLCVSVNRN EYVSSSTTAK IVTINGDLRE YDVPVLASQV LESESTSSSS SSSSSSYFLC NSDSLYYDDF IPAIESDEIL QANQIYFVLP ISKRQYRLSA
101: SDMAALAVKA SVAIEKAAGK KNRRRRSGRI SPVVTLNQAN DNRIAAVNNR IGGEATNMMM QKGKLPNRTT PFKDTNGYSR SGSVRKLKRY TSGRAKLAVR
201: SFRLRLSTIY EGSSFN

Arabidopsis Description

Poly polymerase [Source:UniProtKB/TrEMBL;Acc:Q9C9J8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.