Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH69989 | Soybean | cytosol | 81.29 | 84.24 |
| KRH76906 | Soybean | cytosol | 51.46 | 55.35 |
| KRH28562 | Soybean | cytosol | 48.54 | 50.92 |
| VIT_00s0207g00140.t01 | Wine grape | cytosol | 48.54 | 50.92 |
| VIT_00s0207g00180.t01 | Wine grape | cytosol | 47.95 | 50.31 |
| Solyc03g044860.1.1 | Tomato | cytosol | 42.11 | 49.32 |
| Solyc02g089990.1.1 | Tomato | nucleus | 45.61 | 48.45 |
| PGSC0003DMT400026013 | Potato | cytosol, nucleus, plastid | 45.61 | 48.15 |
| PGSC0003DMT400007187 | Potato | cytosol | 42.69 | 48.03 |
| Bra032151.1-P | Field mustard | cytosol | 45.61 | 47.85 |
| CDY39665 | Canola | cytosol | 45.61 | 47.85 |
| Solyc02g065430.1.1 | Tomato | cytosol | 42.11 | 47.37 |
| AT2G23690.1 | Thale cress | cytosol | 45.03 | 47.24 |
| CDX89594 | Canola | cytosol | 44.44 | 46.63 |
| PGSC0003DMT400059007 | Potato | cytosol, nucleus, plastid | 39.18 | 46.21 |
| CDY46066 | Canola | cytosol | 43.86 | 46.01 |
| Bra039208.1-P | Field mustard | cytosol | 36.84 | 45.32 |
| CDX76853 | Canola | cytosol | 42.11 | 43.9 |
| AT4G37240.1 | Thale cress | cytosol, nucleus, plastid | 42.11 | 42.86 |
| CDY22462 | Canola | cytosol, nucleus, plastid | 43.27 | 42.77 |
| Bra017789.1-P | Field mustard | nucleus | 42.69 | 42.69 |
| CDY42708 | Canola | nucleus | 42.69 | 42.69 |
| CDY24764 | Canola | cytosol, nucleus, plastid | 42.69 | 42.2 |
| Bra010578.1-P | Field mustard | cytosol, nucleus, plastid | 36.84 | 42.0 |
| GSMUA_Achr2P08730_001 | Banana | cytosol | 39.77 | 40.96 |
| CDX72612 | Canola | nucleus | 40.94 | 40.94 |
| Bra011715.1-P | Field mustard | nucleus | 40.35 | 39.43 |
| CDX75606 | Canola | nucleus | 40.35 | 39.43 |
| CDX69254 | Canola | cytosol | 40.94 | 39.33 |
| GSMUA_Achr7P27420_001 | Banana | cytosol | 36.26 | 37.58 |
| Os03t0768900-00 | Rice | cytosol | 33.33 | 32.39 |
| TraesCS5A01G379900.1 | Wheat | plastid | 30.99 | 31.74 |
| TraesCS5D01G389400.1 | Wheat | plastid | 30.99 | 31.36 |
| TraesCS5B01G383500.1 | Wheat | plastid | 30.41 | 30.23 |
| TraesCS5D01G414000.1 | Wheat | cytosol | 31.58 | 30.17 |
| TraesCS5D01G414100.1 | Wheat | cytosol | 30.99 | 29.61 |
| HORVU5Hr1G098280.1 | Barley | cytosol | 30.41 | 29.55 |
| TraesCS5D01G414200.1 | Wheat | cytosol | 30.41 | 29.55 |
| Zm00001d013311_P001 | Maize | plastid | 27.49 | 29.38 |
| TraesCS5A01G404000.1 | Wheat | cytosol | 30.41 | 29.05 |
| TraesCS5A01G404200.1 | Wheat | cytosol | 29.82 | 28.98 |
| HORVU5Hr1G098290.1 | Barley | cytosol | 29.82 | 28.98 |
| TraesCS5B01G408700.1 | Wheat | cytosol | 30.99 | 28.8 |
| TraesCS5B01G409000.1 | Wheat | cytosol | 28.66 | 28.66 |
| Zm00001d034190_P001 | Maize | cytosol | 30.41 | 28.57 |
| Zm00001d013178_P001 | Maize | cytosol | 30.99 | 28.49 |
| TraesCS5D01G414300.1 | Wheat | cytosol | 29.24 | 28.41 |
| Os03t0740200-00 | Rice | plastid | 28.07 | 28.24 |
| EER93387 | Sorghum | cytosol | 30.99 | 28.19 |
| TraesCS1D01G444800.1 | Wheat | cytosol, plastid | 30.41 | 27.96 |
| TraesCS5A01G404100.1 | Wheat | cytosol | 28.66 | 27.84 |
| HORVU5Hr1G093900.1 | Barley | plastid | 28.07 | 27.43 |
| TraesCS1D01G444700.1 | Wheat | cytosol, extracellular, peroxisome, plastid | 29.82 | 27.42 |
| TraesCS1A01G436300.1 | Wheat | mitochondrion | 30.41 | 27.37 |
| TraesCS5B01G408800.1 | Wheat | cytosol | 28.07 | 27.27 |
| Zm00001d033943_P001 | Maize | plastid | 26.32 | 27.11 |
| KXG37596 | Sorghum | cytosol, nucleus, plastid | 26.32 | 26.95 |
| HORVU1Hr1G094330.1 | Barley | cytosol | 29.24 | 26.74 |
| TraesCS2D01G257700.1 | Wheat | mitochondrion, nucleus, plastid | 29.24 | 26.6 |
| TraesCS2B01G276000.1 | Wheat | cytosol, nucleus, plastid | 29.24 | 26.6 |
| TraesCS2D01G257800.1 | Wheat | plastid | 29.82 | 26.56 |
| TraesCS1B01G471500.1 | Wheat | mitochondrion | 28.66 | 26.49 |
| TraesCS1A01G436400.1 | Wheat | plastid | 29.24 | 26.45 |
| HORVU5Hr1G098260.1 | Barley | cytosol, mitochondrion | 32.75 | 26.17 |
| TraesCS2B01G276100.1 | Wheat | cytosol, extracellular, plastid | 28.66 | 26.06 |
| TraesCS2A01G266100.1 | Wheat | cytosol | 25.15 | 26.06 |
| TraesCS2A01G266000.1 | Wheat | plastid | 29.24 | 26.04 |
| Os07t0123100-00 | Rice | extracellular | 30.99 | 25.85 |
| HORVU2Hr1G061800.1 | Barley | plastid | 28.66 | 25.79 |
| EER95817 | Sorghum | nucleus | 29.24 | 25.77 |
| Zm00001d018717_P001 | Maize | cytosol | 28.66 | 25.26 |
| KRH24527 | Soybean | cytosol | 21.05 | 25.17 |
| KRH29531 | Soybean | cytosol | 21.05 | 25.0 |
| TraesCS5A01G403900.1 | Wheat | plastid | 32.75 | 24.03 |
| KRH28563 | Soybean | plastid | 19.88 | 23.13 |
| KRH76905 | Soybean | plastid | 19.3 | 22.6 |
| Zm00001d007974_P001 | Maize | nucleus | 25.15 | 22.28 |
| HORVU2Hr1G061850.1 | Barley | extracellular, plastid | 17.54 | 15.15 |
Protein Annotations
| EMBL:ACUP02010166 | EnsemblPlants:KRH08345 | EnsemblPlantsGene:GLYMA_16G143400 | EntrezGene:100790666 | InterPro:DUF4228_plant | PANTHER:PTHR33052 |
| PANTHER:PTHR33052:SF17 | PFAM:PF14009 | ProteinID:KRH08345 | ProteinID:KRH08345.1 | SEG:seg | UniParc:UPI000233BBD6 |
| UniProt:I1MNJ8 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr16:-:30337469..30338390
Molecular Weight (calculated)
18326.9 Da
IEP (calculated)
8.629
GRAVY (calculated)
-0.112
Length
171 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNCVFSSYH ETTSQVSTAK VVVHDGRMQE FSYPVKVSYL LQLYPACFIC DSDELGFDDV VTAVHEDEEL RPGQLYFALP LTRLKRHLPP QEMAALAVVA
101: TSALAKCGRR QIVFLSAADG NAKPARRVAP DGGAAAATVF NHNVASKGKG KIGGRGRGKF TATLSSIPEQ G
101: TSALAKCGRR QIVFLSAADG NAKPARRVAP DGGAAAATVF NHNVASKGKG KIGGRGRGKF TATLSSIPEQ G
001: MGICSSYEST QVATAKLILH DGRMMEFTSP VKVGYVLQKN PMCFICNSDD MDFDNVVSAI SADEEFQLGQ LYFALPLSSL HHSLKAEEMA ALAVKASSAL
101: MRSGGSCGRD KCRCRRKCVS PVIFSARRVA AVGANGETRN GKRRGGGGSG RRKYAAKLSK IEE
101: MRSGGSCGRD KCRCRRKCVS PVIFSARRVA AVGANGETRN GKRRGGGGSG RRKYAAKLSK IEE
Arabidopsis Description
HTH-type transcriptional regulator [Source:UniProtKB/TrEMBL;Acc:Q680G2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.