Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G061800.1 | Barley | plastid | 47.98 | 50.0 |
| HORVU1Hr1G094330.1 | Barley | cytosol | 43.43 | 45.99 |
| HORVU5Hr1G098290.1 | Barley | cytosol | 31.82 | 35.8 |
| HORVU5Hr1G098280.1 | Barley | cytosol | 30.81 | 34.66 |
| Os07t0123100-00 | Rice | extracellular | 31.82 | 30.73 |
| HORVU5Hr1G098260.1 | Barley | cytosol, mitochondrion | 30.3 | 28.04 |
| PGSC0003DMT400059007 | Potato | cytosol, nucleus, plastid | 17.68 | 24.14 |
| KRH28562 | Soybean | cytosol | 19.7 | 23.93 |
| VIT_00s0207g00140.t01 | Wine grape | cytosol | 19.7 | 23.93 |
| GSMUA_Achr7P27420_001 | Banana | cytosol | 19.7 | 23.64 |
| Solyc02g089990.1.1 | Tomato | nucleus | 19.19 | 23.6 |
| PGSC0003DMT400026013 | Potato | cytosol, nucleus, plastid | 19.19 | 23.46 |
| VIT_00s0207g00180.t01 | Wine grape | cytosol | 19.19 | 23.31 |
| KRH76906 | Soybean | cytosol | 18.69 | 23.27 |
| GSMUA_Achr2P08730_001 | Banana | cytosol | 19.19 | 22.89 |
| Solyc03g044860.1.1 | Tomato | cytosol | 16.67 | 22.6 |
| Bra039208.1-P | Field mustard | cytosol | 15.66 | 22.3 |
| CDX77946 | Canola | cytosol | 16.67 | 22.3 |
| CDX72612 | Canola | nucleus | 18.69 | 21.64 |
| Bra036862.1-P | Field mustard | cytosol | 16.16 | 21.62 |
| CDX73789 | Canola | cytosol | 16.67 | 21.57 |
| AT2G23690.1 | Thale cress | cytosol | 17.68 | 21.47 |
| CDY45243 | Canola | cytosol | 15.15 | 21.43 |
| Bra012084.1-P | Field mustard | cytosol | 15.15 | 21.43 |
| CDX81387 | Canola | cytosol | 16.67 | 21.29 |
| AT5G66580.1 | Thale cress | cytosol | 16.67 | 21.15 |
| PGSC0003DMT400007187 | Potato | cytosol | 16.16 | 21.05 |
| Bra017789.1-P | Field mustard | nucleus | 18.18 | 21.05 |
| CDY39665 | Canola | cytosol | 17.17 | 20.86 |
| CDY46066 | Canola | cytosol | 17.17 | 20.86 |
| Bra032151.1-P | Field mustard | cytosol | 17.17 | 20.86 |
| AT4G37240.1 | Thale cress | cytosol, nucleus, plastid | 17.68 | 20.83 |
| Bra010578.1-P | Field mustard | cytosol, nucleus, plastid | 15.66 | 20.67 |
| CDY18612 | Canola | cytosol | 16.16 | 20.65 |
| Bra037163.1-P | Field mustard | cytosol | 16.16 | 20.65 |
| CDY55087 | Canola | cytosol | 15.66 | 20.53 |
| Bra031814.1-P | Field mustard | cytosol | 15.66 | 20.53 |
| Bra012887.1-P | Field mustard | cytosol, nucleus, plastid | 16.16 | 20.51 |
| CDX90684 | Canola | cytosol, nucleus, plastid | 16.16 | 20.51 |
| CDY28982 | Canola | nucleus | 16.16 | 20.51 |
| CDY42708 | Canola | nucleus | 17.68 | 20.47 |
| Solyc02g065430.1.1 | Tomato | cytosol | 15.66 | 20.39 |
| AT3G50800.1 | Thale cress | cytosol, nucleus, plastid | 15.66 | 20.39 |
| CDX89594 | Canola | cytosol | 16.67 | 20.25 |
| CDX69254 | Canola | cytosol | 17.68 | 19.66 |
| CDX76853 | Canola | cytosol | 16.16 | 19.51 |
| Bra011715.1-P | Field mustard | nucleus | 17.17 | 19.43 |
| CDX75606 | Canola | nucleus | 17.17 | 19.43 |
| CDY24764 | Canola | cytosol, nucleus, plastid | 16.67 | 19.08 |
| HORVU5Hr1G074010.1 | Barley | plastid | 17.68 | 19.02 |
| HORVU5Hr1G093900.1 | Barley | plastid | 16.67 | 18.86 |
| HORVU6Hr1G034380.1 | Barley | plastid | 18.18 | 18.85 |
| KRH69989 | Soybean | cytosol | 15.66 | 18.79 |
| CDY28078 | Canola | cytosol | 15.15 | 18.75 |
| CDY22462 | Canola | cytosol, nucleus, plastid | 16.16 | 18.5 |
| VIT_03s0063g01940.t01 | Wine grape | cytosol | 16.16 | 18.39 |
| KRH08345 | Soybean | cytosol | 15.15 | 17.54 |
| HORVU7Hr1G093080.1 | Barley | plastid | 17.17 | 16.11 |
| HORVU7Hr1G093050.1 | Barley | mitochondrion, plastid | 17.17 | 16.04 |
| HORVU6Hr1G034360.1 | Barley | mitochondrion, plastid | 14.14 | 16.0 |
| HORVU6Hr1G034350.1 | Barley | cytosol | 16.16 | 15.24 |
| HORVU5Hr1G074020.1 | Barley | nucleus | 18.18 | 14.94 |
| HORVU5Hr1G074030.1 | Barley | cytosol, mitochondrion | 16.67 | 14.1 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G061850.1 | EnsemblPlantsGene:HORVU2Hr1G061850 | PANTHER:PTHR33052 | PANTHER:PTHR33052:SF62 | SEG:seg | UniParc:UPI000B4718D9 |
| UniProt:A0A287I662 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:418166439..418167855
Molecular Weight (calculated)
21377.1 Da
IEP (calculated)
10.700
GRAVY (calculated)
-0.243
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLLPQAAEP LLPPPRLSLP YIKSGLPLLQ LHHNLSPRLS IPPLTYSCSN DNNIIVSYYI QFTTTPARPS NLHQHVAKMG LCMSSGGAAX DVYKRQVKRN
101: GLRREDVAAL AVRASAALVN KANTNASGSG GRRKRAGSVS PLVFAPPPEV DETLAHNYKT VPALIAKRRP VARVKSAGRM QPRFAPDLTA IPECEMNE
101: GLRREDVAAL AVRASAALVN KANTNASGSG GRRKRAGSVS PLVFAPPPEV DETLAHNYKT VPALIAKRRP VARVKSAGRM QPRFAPDLTA IPECEMNE
001: MGLCVSVNRN EYVSSSTTAK IVTINGDLRE YDVPVLASQV LESESTSSSS SSSSSSYFLC NSDSLYYDDF IPAIESDEIL QANQIYFVLP ISKRQYRLSA
101: SDMAALAVKA SVAIEKAAGK KNRRRRSGRI SPVVTLNQAN DNRIAAVNNR IGGEATNMMM QKGKLPNRTT PFKDTNGYSR SGSVRKLKRY TSGRAKLAVR
201: SFRLRLSTIY EGSSFN
101: SDMAALAVKA SVAIEKAAGK KNRRRRSGRI SPVVTLNQAN DNRIAAVNNR IGGEATNMMM QKGKLPNRTT PFKDTNGYSR SGSVRKLKRY TSGRAKLAVR
201: SFRLRLSTIY EGSSFN
Arabidopsis Description
Poly polymerase [Source:UniProtKB/TrEMBL;Acc:Q9C9J8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.