Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18612 | Canola | cytosol | 98.06 | 98.06 |
| CDY45243 | Canola | cytosol | 80.0 | 88.57 |
| AT5G66580.1 | Thale cress | cytosol | 86.45 | 85.9 |
| CDY55087 | Canola | cytosol | 80.0 | 82.12 |
| CDX73789 | Canola | cytosol | 66.45 | 67.32 |
| CDX77946 | Canola | cytosol | 63.87 | 66.89 |
| CDY28982 | Canola | nucleus | 67.1 | 66.67 |
| CDX90684 | Canola | cytosol, nucleus, plastid | 67.1 | 66.67 |
| CDY28078 | Canola | cytosol | 64.52 | 62.5 |
| CDY24764 | Canola | cytosol, nucleus, plastid | 54.84 | 49.13 |
| CDY42708 | Canola | nucleus | 53.55 | 48.54 |
| CDY22462 | Canola | cytosol, nucleus, plastid | 53.55 | 47.98 |
| CDX72612 | Canola | nucleus | 52.26 | 47.37 |
| CDY39665 | Canola | cytosol | 49.68 | 47.24 |
| CDX89594 | Canola | cytosol | 49.03 | 46.63 |
| CDY46066 | Canola | cytosol | 48.39 | 46.01 |
| CDX76853 | Canola | cytosol | 47.1 | 44.51 |
| CDX75606 | Canola | nucleus | 48.39 | 42.86 |
| CDX69254 | Canola | cytosol | 48.39 | 42.13 |
| GSMUA_Achr2P08730_001 | Banana | cytosol | 43.87 | 40.96 |
| GSMUA_Achr7P27420_001 | Banana | cytosol | 42.58 | 40.0 |
| Zm00001d013311_P001 | Maize | plastid | 36.77 | 35.62 |
| TraesCS5A01G379900.1 | Wheat | plastid | 36.13 | 33.53 |
| Os03t0740200-00 | Rice | plastid | 36.77 | 33.53 |
| TraesCS5D01G389400.1 | Wheat | plastid | 36.13 | 33.14 |
| TraesCS5B01G383500.1 | Wheat | plastid | 36.13 | 32.56 |
| Zm00001d033943_P001 | Maize | plastid | 34.19 | 31.93 |
| KXG37596 | Sorghum | cytosol, nucleus, plastid | 34.19 | 31.74 |
| TraesCS1B01G471500.1 | Wheat | mitochondrion | 36.13 | 30.27 |
| TraesCS5D01G414100.1 | Wheat | cytosol | 34.84 | 30.17 |
| TraesCS5D01G414200.1 | Wheat | cytosol | 34.19 | 30.11 |
| TraesCS5B01G409000.1 | Wheat | cytosol | 32.9 | 29.82 |
| Zm00001d034190_P001 | Maize | cytosol | 34.84 | 29.67 |
| TraesCS5D01G414000.1 | Wheat | cytosol | 34.19 | 29.61 |
| TraesCS5A01G404200.1 | Wheat | cytosol | 33.55 | 29.55 |
| Os03t0768900-00 | Rice | cytosol | 33.55 | 29.55 |
| HORVU5Hr1G098280.1 | Barley | cytosol | 33.55 | 29.55 |
| TraesCS5D01G414300.1 | Wheat | cytosol | 33.55 | 29.55 |
| TraesCS2B01G276100.1 | Wheat | cytosol, extracellular, plastid | 35.48 | 29.26 |
| TraesCS2D01G257800.1 | Wheat | plastid | 36.13 | 29.17 |
| TraesCS5A01G404000.1 | Wheat | cytosol | 33.55 | 29.05 |
| TraesCS1D01G444800.1 | Wheat | cytosol, plastid | 34.84 | 29.03 |
| TraesCS5A01G404100.1 | Wheat | cytosol | 32.9 | 28.98 |
| HORVU5Hr1G098290.1 | Barley | cytosol | 32.9 | 28.98 |
| TraesCS1A01G436300.1 | Wheat | mitochondrion | 35.48 | 28.95 |
| HORVU1Hr1G094330.1 | Barley | cytosol | 34.84 | 28.88 |
| TraesCS5B01G408700.1 | Wheat | cytosol | 34.19 | 28.8 |
| TraesCS2A01G266000.1 | Wheat | plastid | 35.48 | 28.65 |
| HORVU5Hr1G093900.1 | Barley | plastid | 32.26 | 28.57 |
| TraesCS1A01G436400.1 | Wheat | plastid | 34.84 | 28.57 |
| TraesCS2A01G266100.1 | Wheat | cytosol | 30.32 | 28.48 |
| TraesCS5B01G408800.1 | Wheat | cytosol | 32.26 | 28.41 |
| TraesCS2D01G257700.1 | Wheat | mitochondrion, nucleus, plastid | 34.19 | 28.19 |
| Zm00001d013178_P001 | Maize | cytosol | 33.55 | 27.96 |
| EER95817 | Sorghum | nucleus | 34.84 | 27.84 |
| TraesCS2B01G276000.1 | Wheat | cytosol, nucleus, plastid | 33.55 | 27.66 |
| EER93387 | Sorghum | cytosol | 33.55 | 27.66 |
| TraesCS1D01G444700.1 | Wheat | cytosol, extracellular, peroxisome, plastid | 32.9 | 27.42 |
| HORVU2Hr1G061800.1 | Barley | plastid | 33.55 | 27.37 |
| Zm00001d018717_P001 | Maize | cytosol | 32.26 | 25.77 |
| HORVU5Hr1G098260.1 | Barley | cytosol, mitochondrion | 35.48 | 25.7 |
| Os07t0123100-00 | Rice | extracellular | 33.55 | 25.37 |
| CDX68092 | Canola | cytosol, plastid | 33.55 | 24.76 |
| CDY33663 | Canola | cytosol | 32.9 | 24.64 |
| CDX96609 | Canola | cytosol | 32.9 | 24.29 |
| CDY45978 | Canola | nucleus | 32.9 | 24.06 |
| CDY20399 | Canola | nucleus, plastid | 32.9 | 23.94 |
| CDX85960 | Canola | cytosol | 31.61 | 23.56 |
| Zm00001d007974_P001 | Maize | nucleus | 29.03 | 23.32 |
| CDY01339 | Canola | nucleus | 30.97 | 23.19 |
| TraesCS5A01G403900.1 | Wheat | plastid | 34.84 | 23.18 |
| CDY00357 | Canola | nucleus | 30.32 | 22.71 |
| CDY04592 | Canola | plastid | 32.26 | 20.75 |
| CDY29485 | Canola | plastid | 32.26 | 20.66 |
| CDY06423 | Canola | cytosol | 20.0 | 19.25 |
| HORVU2Hr1G061850.1 | Barley | extracellular, plastid | 21.29 | 16.67 |
Protein Annotations
| EnsemblPlants:CDX81387 | EnsemblPlantsGene:GSBRNA2T00134965001 | InterPro:DUF4228_plant | PANTHER:PTHR33052 | PANTHER:PTHR33052:SF17 | PFAM:PF14009 |
| ProteinID:CDX81387 | ProteinID:CDX81387.1 | SEG:seg | UniParc:UPI0004EF4B7A | MapMan:35.2 | : |
Description
BnaC09g07980D
Coordinates
chrLK031824:-:1463918..1464385
Molecular Weight (calculated)
16752.9 Da
IEP (calculated)
7.132
GRAVY (calculated)
-0.175
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MGACVSRESM RGDSAKVILF DGTLQEFSSP VKVWQILQKY PTSFVCNSDE MDFDDAVSAV SGNEELRLGQ LYFVLPLTWL NHPLRAEEMA ALAVKASSAL
101: AKSGGVGWVS VDDSDVDGKV YQPKNIAGVK TNAGGGRCCG RGKRRFTRNL STIAE
101: AKSGGVGWVS VDDSDVDGKV YQPKNIAGVK TNAGGGRCCG RGKRRFTRNL STIAE
001: MGACASRESL RSDSAKLILL DGTLQEFSSP VKVWQILQKN PTSFVCNSDE MDFDDAVSAV AGNEELRSGQ LYFVLPLTWL NHPLRAEEMA ALAVKASSAL
101: TKSGGVGWVS GDDDVTTSEK TYQKKNIAGV KTNGGGGRGC GKGKRRFTAN LSTIAE
101: TKSGGVGWVS GDDDVTTSEK TYQKKNIAGV KTNGGGGRGC GKGKRRFTAN LSTIAE
Arabidopsis Description
Uncharacterized protein At5g66580 [Source:UniProtKB/TrEMBL;Acc:Q9FJY2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.