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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:plasma membrane, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:plastid
Plant-mPloc:plasma membrane
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
Os01t0267900-01
Os01t0279300-01
Os01t0810300-01
Os03t0319300-01
Os03t0743500-02
Os04t0654700-02
Os05t0491000-01
Os05t0491100-01
Os07t0687200-02
Os12t0603800-00

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G37240.1 Os04t0654700-02 AT1G22920.1 21798944
AT4G37240.1 Os01t0267900-01 AT2G41090.1 17360592
AT4G37240.1 Os01t0279300-01 AT2G41090.1 17360592
AT4G37240.1 Os01t0810300-01 AT2G41090.1 17360592
AT4G37240.1 Os03t0319300-01 AT2G41090.1 17360592
AT4G37240.1 Os05t0491000-01 AT2G41090.1 17360592
AT4G37240.1 Os05t0491100-01 AT2G41090.1 17360592
AT4G37240.1 Os07t0687200-02 AT2G41090.1 17360592
AT4G37240.1 Os12t0603800-00 AT2G41090.1 17360592
AT4G37240.1 Os01t0267900-01 AT2G41100.1 17360592
AT4G37240.1 Os01t0279300-01 AT2G41100.1 17360592
AT4G37240.1 Os01t0810300-01 AT2G41100.1 17360592
AT4G37240.1 Os03t0319300-01 AT2G41100.1 17360592
AT4G37240.1 Os05t0491000-01 AT2G41100.1 17360592
AT4G37240.1 Os05t0491100-01 AT2G41100.1 17360592
AT4G37240.1 Os07t0687200-02 AT2G41100.1 17360592
AT4G37240.1 Os12t0603800-00 AT2G41100.1 17360592
AT4G37240.1 Os03t0743500-02 AT4G14640.1 17360592
AT4G37240.1 Os01t0267900-01 AT5G21274.1 17360592
AT4G37240.1 Os01t0279300-01 AT5G21274.1 17360592
AT4G37240.1 Os01t0810300-01 AT5G21274.1 17360592
AT4G37240.1 Os03t0319300-01 AT5G21274.1 17360592
AT4G37240.1 Os05t0491000-01 AT5G21274.1 17360592
AT4G37240.1 Os05t0491100-01 AT5G21274.1 17360592
AT4G37240.1 Os07t0687200-02 AT5G21274.1 17360592
AT4G37240.1 Os12t0603800-00 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG37596 Sorghum cytosol, nucleus, plastid 79.41 80.84
Zm00001d033943_P001 Maize plastid 77.06 78.92
TraesCS5A01G379900.1 Wheat plastid 75.88 77.25
Zm00001d013311_P001 Maize plastid 71.76 76.25
TraesCS5D01G389400.1 Wheat plastid 75.29 75.74
TraesCS5B01G383500.1 Wheat plastid 76.47 75.58
HORVU5Hr1G093900.1 Barley plastid 67.65 65.71
Os03t0768900-00 Rice cytosol 45.88 44.32
GSMUA_Achr7P27420_001 Banana cytosol 40.59 41.82
Solyc02g089990.1.1 Tomato nucleus 39.41 41.61
PGSC0003DMT400026013 Potato cytosol, nucleus, plastid 39.41 41.36
GSMUA_Achr2P08730_001 Banana cytosol 38.82 39.76
Bra012084.1-P Field mustard cytosol 32.35 39.29
CDY45243 Canola cytosol 32.35 39.29
PGSC0003DMT400059007 Potato cytosol, nucleus, plastid 32.35 37.93
Solyc03g044860.1.1 Tomato cytosol 31.76 36.99
VIT_00s0207g00140.t01 Wine grape cytosol 35.29 36.81
VIT_00s0207g00180.t01 Wine grape cytosol 35.29 36.81
CDX81387 Canola cytosol 33.53 36.77
CDX77946 Canola cytosol 31.76 36.49
AT5G66580.1 Thale cress cytosol 32.94 35.9
Bra036862.1-P Field mustard cytosol 31.18 35.81
AT3G50800.1 Thale cress cytosol, nucleus, plastid 31.76 35.53
Solyc02g065430.1.1 Tomato cytosol 31.76 35.53
PGSC0003DMT400007187 Potato cytosol 31.76 35.53
Bra037163.1-P Field mustard cytosol 32.35 35.48
CDY18612 Canola cytosol 32.35 35.48
CDX73789 Canola cytosol 31.76 35.29
CDY28982 Canola nucleus 32.35 35.26
Bra012887.1-P Field mustard cytosol, nucleus, plastid 32.35 35.26
CDX90684 Canola cytosol, nucleus, plastid 32.35 35.26
Bra031814.1-P Field mustard cytosol 31.18 35.1
CDY55087 Canola cytosol 31.18 35.1
Os07t0123100-00 Rice extracellular 41.76 34.63
CDY28078 Canola cytosol 32.35 34.38
KRH76906 Soybean cytosol 31.76 33.96
Bra017789.1-P Field mustard nucleus 33.53 33.33
AT4G37240.1 Thale cress cytosol, nucleus, plastid 32.94 33.33
CDY42708 Canola nucleus 32.94 32.75
CDX72612 Canola nucleus 32.94 32.75
CDX89594 Canola cytosol 30.59 31.9
KRH28562 Soybean cytosol 30.59 31.9
CDY22462 Canola cytosol, nucleus, plastid 32.35 31.79
VIT_03s0063g01940.t01 Wine grape cytosol 32.35 31.61
CDX69254 Canola cytosol 32.94 31.46
Bra011715.1-P Field mustard nucleus 32.35 31.43
CDX75606 Canola nucleus 32.35 31.43
Bra032151.1-P Field mustard cytosol 30.0 31.29
AT2G23690.1 Thale cress cytosol 30.0 31.29
CDY39665 Canola cytosol 30.0 31.29
CDY46066 Canola cytosol 28.82 30.06
CDY24764 Canola cytosol, nucleus, plastid 30.59 30.06
CDX76853 Canola cytosol 28.24 29.27
Os09t0492900-00 Rice cytosol, mitochondrion, nucleus, plastid 31.18 28.96
KRH69989 Soybean cytosol 27.65 28.48
KRH08345 Soybean cytosol 28.24 28.07
Bra010578.1-P Field mustard cytosol, nucleus, plastid 24.71 28.0
Os02t0193300-01 Rice mitochondrion 31.18 27.6
Bra039208.1-P Field mustard cytosol 22.35 27.34
Os02t0193200-01 Rice mitochondrion 31.76 27.0
Os02t0193100-01 Rice cytosol, peroxisome, plastid 31.18 25.36
Os09t0493000-01 Rice plastid 4.71 3.98
Protein Annotations
EnsemblPlants:Os03t0740200-00EnsemblPlantsGene:Os03g0740200EntrezGene:4334055InterPro:DUF4228_plantPANTHER:PTHR33052PANTHER:PTHR33052:SF27
PFAM:PF14009ProteinID:AAP44703.1ProteinID:AAR87308.1ProteinID:ABF98784.1ProteinID:BAF13131.1ProteinID:BAS86300.1
RefSeq:XP_015630034.1SEG:segUniParc:UPI000019C5C8UniProt:Q7Y1F7MapMan:35.2:
Description
Conserved hypothetical protein. (Os03t0740200-00)
Coordinates
chr3:+:30368953..30369657
Molecular Weight (calculated)
17018.0 Da
IEP (calculated)
7.949
GRAVY (calculated)
-0.050
Length
170 amino acids
Sequence
(BLAST)
001: MGACNSCEAT AVAAVNGRSA SGEATAARVV LADGALRRFP GGTRASQAVK AAGGGGGGSS WFLCSADGLE LGAAVAAVGG GDDEELQPGQ LYFVLPAAMR
101: RRPLQAEEMA ALAVRASAAL VGDHDGPLVF PEAAASAADP RAAGKGCRRS RTRRHSRGRD FVPDLGAIAE
Best Arabidopsis Sequence Match ( AT5G66580.1 )
(BLAST)
001: MGACASRESL RSDSAKLILL DGTLQEFSSP VKVWQILQKN PTSFVCNSDE MDFDDAVSAV AGNEELRSGQ LYFVLPLTWL NHPLRAEEMA ALAVKASSAL
101: TKSGGVGWVS GDDDVTTSEK TYQKKNIAGV KTNGGGGRGC GKGKRRFTAN LSTIAE
Arabidopsis Description
Uncharacterized protein At5g66580 [Source:UniProtKB/TrEMBL;Acc:Q9FJY2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.