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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • vacuole 1
  • cytosol 3
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid, vacuole
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra037163.1-P Field mustard cytosol 100.0 100.0
CDX81387 Canola cytosol 98.06 98.06
CDY45243 Canola cytosol 80.65 89.29
AT5G66580.1 Thale cress cytosol 87.1 86.54
CDY55087 Canola cytosol 79.35 81.46
CDX73789 Canola cytosol 66.45 67.32
CDX77946 Canola cytosol 63.87 66.89
CDX90684 Canola cytosol, nucleus, plastid 67.1 66.67
CDY28982 Canola nucleus 67.1 66.67
CDY28078 Canola cytosol 64.52 62.5
CDY24764 Canola cytosol, nucleus, plastid 55.48 49.71
CDY42708 Canola nucleus 54.19 49.12
CDY22462 Canola cytosol, nucleus, plastid 54.19 48.55
CDX72612 Canola nucleus 52.9 47.95
CDY39665 Canola cytosol 50.32 47.85
CDX89594 Canola cytosol 49.68 47.24
CDY46066 Canola cytosol 49.03 46.63
CDX76853 Canola cytosol 47.74 45.12
CDX75606 Canola nucleus 49.03 43.43
CDX69254 Canola cytosol 49.03 42.7
GSMUA_Achr2P08730_001 Banana cytosol 44.52 41.57
GSMUA_Achr7P27420_001 Banana cytosol 43.23 40.61
Zm00001d013311_P001 Maize plastid 35.48 34.38
Os03t0740200-00 Rice plastid 35.48 32.35
TraesCS5A01G379900.1 Wheat plastid 34.84 32.34
TraesCS5D01G389400.1 Wheat plastid 34.84 31.95
TraesCS5B01G383500.1 Wheat plastid 34.84 31.4
Zm00001d033943_P001 Maize plastid 32.9 30.72
KXG37596 Sorghum cytosol, nucleus, plastid 32.9 30.54
TraesCS1B01G471500.1 Wheat mitochondrion 34.84 29.19
TraesCS5D01G414100.1 Wheat cytosol 33.55 29.05
TraesCS5D01G414200.1 Wheat cytosol 32.9 28.98
TraesCS5B01G409000.1 Wheat cytosol 31.61 28.66
Zm00001d034190_P001 Maize cytosol 33.55 28.57
TraesCS5D01G414000.1 Wheat cytosol 32.9 28.49
Os03t0768900-00 Rice cytosol 32.26 28.41
TraesCS5D01G414300.1 Wheat cytosol 32.26 28.41
TraesCS5A01G404200.1 Wheat cytosol 32.26 28.41
HORVU5Hr1G098280.1 Barley cytosol 32.26 28.41
TraesCS2B01G276100.1 Wheat cytosol, extracellular, plastid 34.19 28.19
TraesCS2D01G257800.1 Wheat plastid 34.84 28.12
TraesCS1A01G436400.1 Wheat plastid 34.19 28.04
TraesCS1D01G444800.1 Wheat cytosol, plastid 33.55 27.96
TraesCS5A01G404000.1 Wheat cytosol 32.26 27.93
TraesCS1A01G436300.1 Wheat mitochondrion 34.19 27.89
HORVU5Hr1G098290.1 Barley cytosol 31.61 27.84
TraesCS5A01G404100.1 Wheat cytosol 31.61 27.84
HORVU1Hr1G094330.1 Barley cytosol 33.55 27.81
TraesCS5B01G408700.1 Wheat cytosol 32.9 27.72
TraesCS2A01G266000.1 Wheat plastid 34.19 27.6
HORVU5Hr1G093900.1 Barley plastid 30.97 27.43
TraesCS5B01G408800.1 Wheat cytosol 30.97 27.27
TraesCS2A01G266100.1 Wheat cytosol 29.03 27.27
TraesCS2D01G257700.1 Wheat mitochondrion, nucleus, plastid 32.9 27.13
Zm00001d013178_P001 Maize cytosol 32.26 26.88
EER95817 Sorghum nucleus 33.55 26.8
TraesCS2B01G276000.1 Wheat cytosol, nucleus, plastid 32.26 26.6
EER93387 Sorghum cytosol 32.26 26.6
TraesCS1D01G444700.1 Wheat cytosol, extracellular, peroxisome, plastid 31.61 26.34
HORVU2Hr1G061800.1 Barley plastid 32.26 26.32
HORVU5Hr1G098260.1 Barley cytosol, mitochondrion 34.19 24.77
Zm00001d018717_P001 Maize cytosol 30.97 24.74
Os07t0123100-00 Rice extracellular 32.26 24.39
CDX68092 Canola cytosol, plastid 32.9 24.29
CDY33663 Canola cytosol 32.26 24.15
CDX96609 Canola cytosol 32.26 23.81
CDY45978 Canola nucleus 32.26 23.58
CDY20399 Canola nucleus, plastid 32.26 23.47
CDX85960 Canola cytosol 30.97 23.08
CDY01339 Canola nucleus 30.32 22.71
TraesCS5A01G403900.1 Wheat plastid 33.55 22.32
Zm00001d007974_P001 Maize nucleus 27.74 22.28
CDY00357 Canola nucleus 29.68 22.22
CDY04592 Canola plastid 31.61 20.33
CDY29485 Canola plastid 31.61 20.25
CDY06423 Canola cytosol 19.35 18.63
HORVU2Hr1G061850.1 Barley extracellular, plastid 20.65 16.16
Protein Annotations
EnsemblPlants:CDY18612EnsemblPlantsGene:GSBRNA2T00005669001InterPro:DUF4228_plantPANTHER:PTHR33052PANTHER:PTHR33052:SF17PFAM:PF14009
ProteinID:CDY18612ProteinID:CDY18612.1SEG:segUniParc:UPI0002541CA3UniProt:A0A078G0T4MapMan:35.2
Description
BnaA09g07830DBnaA09g07830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G0T4]
Coordinates
chrLK032087:+:176059..176526
Molecular Weight (calculated)
16712.8 Da
IEP (calculated)
7.132
GRAVY (calculated)
-0.223
Length
155 amino acids
Sequence
(BLAST)
001: MGACVSRESM RGDSAKLILF DGTLQEFSSP VKVWQILQKY PTSFVCNSDE MDFDDAVSAV SGNEELRSGQ LYFALPLTWL NHPLRAEEMA ALAVKASSAL
101: AKSGGVGWVS VDDSDVDGKV YQPKNIAGVK TNAGGGRCCG RGKRRFTRNL STIAE
Best Arabidopsis Sequence Match ( AT5G66580.1 )
(BLAST)
001: MGACASRESL RSDSAKLILL DGTLQEFSSP VKVWQILQKN PTSFVCNSDE MDFDDAVSAV AGNEELRSGQ LYFVLPLTWL NHPLRAEEMA ALAVKASSAL
101: TKSGGVGWVS GDDDVTTSEK TYQKKNIAGV KTNGGGGRGC GKGKRRFTAN LSTIAE
Arabidopsis Description
Uncharacterized protein At5g66580 [Source:UniProtKB/TrEMBL;Acc:Q9FJY2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.