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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, cytosol

Predictor Summary:
  • mitochondrion 2
  • cytosol 1
PPI

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G37240.1 HORVU0Hr1G018470.1 AT1G22920.1 21798944
AT4G37240.1 HORVU0Hr1G025410.1 AT1G22920.1 21798944
AT4G37240.1 HORVU1Hr1G008160.1 AT1G22920.1 21798944
AT4G37240.1 HORVU2Hr1G056160.5 AT1G22920.1 21798944
AT4G37240.1 HORVU2Hr1G067660.1 AT1G22920.1 21798944
AT4G37240.1 HORVU2Hr1G112000.1 AT1G22920.1 21798944
AT4G37240.1 HORVU3Hr1G021300.1 AT1G22920.1 21798944
AT4G37240.1 HORVU3Hr1G054660.1 AT1G22920.1 21798944
AT4G37240.1 HORVU3Hr1G113750.1 AT1G22920.1 21798944
AT4G37240.1 HORVU4Hr1G047410.2 AT1G22920.1 21798944
AT4G37240.1 HORVU4Hr1G048730.1 AT1G22920.1 21798944
AT4G37240.1 HORVU6Hr1G023630.1 AT1G22920.1 21798944
AT4G37240.1 HORVU7Hr1G078010.1 AT1G22920.1 21798944
AT4G37240.1 HORVU0Hr1G001280.1 AT2G41090.1 17360592
AT4G37240.1 HORVU2Hr1G016740.4 AT2G41090.1 17360592
AT4G37240.1 HORVU3Hr1G038010.1 AT2G41090.1 17360592
AT4G37240.1 HORVU3Hr1G079210.4 AT2G41090.1 17360592
AT4G37240.1 HORVU4Hr1G026290.3 AT2G41090.1 17360592
AT4G37240.1 HORVU5Hr1G014060.1 AT2G41090.1 17360592
AT4G37240.1 HORVU5Hr1G014070.2 AT2G41090.1 17360592
AT4G37240.1 HORVU5Hr1G044710.4 AT2G41090.1 17360592
AT4G37240.1 HORVU0Hr1G001280.1 AT2G41100.1 17360592
AT4G37240.1 HORVU2Hr1G016740.4 AT2G41100.1 17360592
AT4G37240.1 HORVU3Hr1G038010.1 AT2G41100.1 17360592
AT4G37240.1 HORVU3Hr1G079210.4 AT2G41100.1 17360592
AT4G37240.1 HORVU4Hr1G026290.3 AT2G41100.1 17360592
AT4G37240.1 HORVU5Hr1G014060.1 AT2G41100.1 17360592
AT4G37240.1 HORVU5Hr1G014070.2 AT2G41100.1 17360592
AT4G37240.1 HORVU5Hr1G044710.4 AT2G41100.1 17360592
AT4G37240.1 HORVU0Hr1G001280.1 AT5G21274.1 17360592
AT4G37240.1 HORVU2Hr1G016740.4 AT5G21274.1 17360592
AT4G37240.1 HORVU3Hr1G038010.1 AT5G21274.1 17360592
AT4G37240.1 HORVU3Hr1G079210.4 AT5G21274.1 17360592
AT4G37240.1 HORVU4Hr1G026290.3 AT5G21274.1 17360592
AT4G37240.1 HORVU5Hr1G014060.1 AT5G21274.1 17360592
AT4G37240.1 HORVU5Hr1G014070.2 AT5G21274.1 17360592
AT4G37240.1 HORVU5Hr1G044710.4 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU5Hr1G098290.1 Barley cytosol 70.56 85.8
TraesCS5A01G404200.1 Wheat cytosol 69.63 84.66
TraesCS5D01G414300.1 Wheat cytosol 68.69 83.52
HORVU5Hr1G098280.1 Barley cytosol 68.69 83.52
Os03t0768900-00 Rice cytosol 54.21 65.91
Zm00001d034190_P001 Maize cytosol 50.47 59.34
EER93387 Sorghum cytosol 51.4 58.51
Zm00001d013178_P001 Maize cytosol 50.0 57.53
HORVU2Hr1G061800.1 Barley plastid 45.79 51.58
HORVU1Hr1G094330.1 Barley cytosol 43.93 50.27
GSMUA_Achr2P08730_001 Banana cytosol 30.37 39.16
CDY45243 Canola cytosol 24.77 37.86
AT3G50800.1 Thale cress cytosol, nucleus, plastid 26.17 36.84
CDY55087 Canola cytosol 25.7 36.42
Bra031814.1-P Field mustard cytosol 25.7 36.42
KRH76906 Soybean cytosol 26.64 35.85
CDX77946 Canola cytosol 24.77 35.81
GSMUA_Achr7P27420_001 Banana cytosol 27.57 35.76
Bra012084.1-P Field mustard cytosol 23.36 35.71
CDX81387 Canola cytosol 25.7 35.48
Bra036862.1-P Field mustard cytosol 24.3 35.14
KRH28562 Soybean cytosol 26.64 34.97
VIT_00s0207g00140.t01 Wine grape cytosol 26.64 34.97
VIT_00s0207g00180.t01 Wine grape cytosol 26.64 34.97
CDY46066 Canola cytosol 26.64 34.97
Solyc03g044860.1.1 Tomato cytosol 23.83 34.93
Solyc02g089990.1.1 Tomato nucleus 26.17 34.78
CDX73789 Canola cytosol 24.77 34.64
PGSC0003DMT400026013 Potato cytosol, nucleus, plastid 26.17 34.57
Bra037163.1-P Field mustard cytosol 24.77 34.19
CDY18612 Canola cytosol 24.77 34.19
CDY28982 Canola nucleus 24.77 33.97
Bra039208.1-P Field mustard cytosol 21.96 33.81
PGSC0003DMT400059007 Potato cytosol, nucleus, plastid 22.9 33.79
Solyc02g065430.1.1 Tomato cytosol 23.83 33.55
PGSC0003DMT400007187 Potato cytosol 23.83 33.55
CDX72612 Canola nucleus 26.64 33.33
AT5G66580.1 Thale cress cytosol 24.3 33.33
Bra017789.1-P Field mustard nucleus 26.64 33.33
CDX90684 Canola cytosol, nucleus, plastid 24.3 33.33
Bra012887.1-P Field mustard cytosol, nucleus, plastid 24.3 33.33
CDY42708 Canola nucleus 26.17 32.75
KRH08345 Soybean cytosol 26.17 32.75
CDY39665 Canola cytosol 24.77 32.52
Bra032151.1-P Field mustard cytosol 24.77 32.52
CDX76853 Canola cytosol 24.77 32.32
KRH69989 Soybean cytosol 24.77 32.12
HORVU5Hr1G093900.1 Barley plastid 26.17 32.0
CDX89594 Canola cytosol 24.3 31.9
CDY28078 Canola cytosol 23.83 31.88
AT4G37240.1 Thale cress cytosol, nucleus, plastid 24.77 31.55
AT2G23690.1 Thale cress cytosol 23.83 31.29
HORVU5Hr1G074010.1 Barley plastid 26.64 30.98
VIT_03s0063g01940.t01 Wine grape cytosol 24.77 30.46
HORVU2Hr1G061850.1 Barley extracellular, plastid 28.04 30.3
CDY22462 Canola cytosol, nucleus, plastid 24.3 30.06
CDY24764 Canola cytosol, nucleus, plastid 23.83 29.48
CDX69254 Canola cytosol 24.3 29.21
Bra011715.1-P Field mustard nucleus 23.83 29.14
CDX75606 Canola nucleus 23.83 29.14
Bra010578.1-P Field mustard cytosol, nucleus, plastid 20.09 28.67
HORVU6Hr1G034380.1 Barley plastid 25.23 28.27
HORVU6Hr1G034360.1 Barley mitochondrion, plastid 22.43 27.43
HORVU5Hr1G074030.1 Barley cytosol, mitochondrion 28.5 26.07
HORVU7Hr1G093050.1 Barley mitochondrion, plastid 25.7 25.94
HORVU7Hr1G093080.1 Barley plastid 25.23 25.59
HORVU5Hr1G074020.1 Barley nucleus 27.57 24.48
HORVU6Hr1G034350.1 Barley cytosol 22.43 22.86
Protein Annotations
EnsemblPlants:HORVU5Hr1G098260.1EnsemblPlantsGene:HORVU5Hr1G098260InterPro:DUF4228_plantPANTHER:PTHR33052PANTHER:PTHR33052:SF63PFAM:PF14009
SEG:segUniParc:UPI000B46EBE8UniProt:A0A287SG55MapMan:35.2::
Description
No Description!
Coordinates
chrchr5H:+:606857748..606858804
Molecular Weight (calculated)
22934.1 Da
IEP (calculated)
8.055
GRAVY (calculated)
-0.296
Length
214 amino acids
Sequence
(BLAST)
001: SGSKHTTPYI TTNKRRTRQR LAPAVQHTRD DQEGMGLCVS YDAAADGPAT AGVVLPSGEL REYSMPATVA LALEEVGEKG WFLCDADRME FDGSVTAVPA
101: GEELRPGHIY FVLPAKTLGR CLTPDEVASL AVKASAALVK AATASSASGR RRRRGSVAPL VFVPSEDDYS AEDTFTMATF AVKPTVTQKR RVAYRGGRSP
201: PRFSPDLTAI LESE
Best Arabidopsis Sequence Match ( AT2G23690.1 )
(BLAST)
001: MGICSSYEST QVATAKLILH DGRMMEFTSP VKVGYVLQKN PMCFICNSDD MDFDNVVSAI SADEEFQLGQ LYFALPLSSL HHSLKAEEMA ALAVKASSAL
101: MRSGGSCGRD KCRCRRKCVS PVIFSARRVA AVGANGETRN GKRRGGGGSG RRKYAAKLSK IEE
Arabidopsis Description
HTH-type transcriptional regulator [Source:UniProtKB/TrEMBL;Acc:Q680G2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.