Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX73789 | Canola | cytosol | 85.53 | 84.97 |
| CDX77946 | Canola | cytosol | 80.92 | 83.11 |
| CDY28982 | Canola | nucleus | 84.87 | 82.69 |
| Bra012887.1-P | Field mustard | cytosol, nucleus, plastid | 84.21 | 82.05 |
| CDX90684 | Canola | cytosol, nucleus, plastid | 84.21 | 82.05 |
| Bra036862.1-P | Field mustard | cytosol | 79.61 | 81.76 |
| CDY28078 | Canola | cytosol | 80.92 | 76.88 |
| AT5G66580.1 | Thale cress | cytosol | 74.34 | 72.44 |
| AT2G23690.1 | Thale cress | cytosol | 54.61 | 50.92 |
| AT4G37240.1 | Thale cress | cytosol, nucleus, plastid | 53.95 | 48.81 |
| GSMUA_Achr7P27420_001 | Banana | cytosol | 44.08 | 40.61 |
| GSMUA_Achr2P08730_001 | Banana | cytosol | 44.08 | 40.36 |
| Zm00001d013311_P001 | Maize | plastid | 35.53 | 33.75 |
| Os03t0740200-00 | Rice | plastid | 35.53 | 31.76 |
| TraesCS5A01G379900.1 | Wheat | plastid | 34.87 | 31.74 |
| TraesCS5D01G389400.1 | Wheat | plastid | 34.87 | 31.36 |
| TraesCS5B01G383500.1 | Wheat | plastid | 34.87 | 30.81 |
| KXG37596 | Sorghum | cytosol, nucleus, plastid | 33.55 | 30.54 |
| Zm00001d033943_P001 | Maize | plastid | 32.89 | 30.12 |
| TraesCS5D01G414100.1 | Wheat | cytosol | 34.21 | 29.05 |
| HORVU5Hr1G098290.1 | Barley | cytosol | 33.55 | 28.98 |
| Os03t0768900-00 | Rice | cytosol | 33.55 | 28.98 |
| TraesCS5B01G409000.1 | Wheat | cytosol | 32.24 | 28.66 |
| TraesCS1B01G471500.1 | Wheat | mitochondrion | 34.87 | 28.65 |
| TraesCS5D01G414200.1 | Wheat | cytosol | 32.89 | 28.41 |
| TraesCS5D01G414300.1 | Wheat | cytosol | 32.89 | 28.41 |
| TraesCS1D01G444800.1 | Wheat | cytosol, plastid | 34.21 | 27.96 |
| TraesCS5A01G404000.1 | Wheat | cytosol | 32.89 | 27.93 |
| HORVU5Hr1G098280.1 | Barley | cytosol | 32.24 | 27.84 |
| TraesCS5A01G404200.1 | Wheat | cytosol | 32.24 | 27.84 |
| TraesCS5A01G404100.1 | Wheat | cytosol | 32.24 | 27.84 |
| TraesCS5B01G408700.1 | Wheat | cytosol | 33.55 | 27.72 |
| TraesCS2B01G276100.1 | Wheat | cytosol, extracellular, plastid | 34.21 | 27.66 |
| TraesCS2A01G266000.1 | Wheat | plastid | 34.87 | 27.6 |
| TraesCS2D01G257800.1 | Wheat | plastid | 34.87 | 27.6 |
| Zm00001d034190_P001 | Maize | cytosol | 32.89 | 27.47 |
| TraesCS5D01G414000.1 | Wheat | cytosol | 32.24 | 27.37 |
| HORVU1Hr1G094330.1 | Barley | cytosol | 33.55 | 27.27 |
| TraesCS5B01G408800.1 | Wheat | cytosol | 31.58 | 27.27 |
| EER93387 | Sorghum | cytosol | 33.55 | 27.13 |
| TraesCS2D01G257700.1 | Wheat | mitochondrion, nucleus, plastid | 33.55 | 27.13 |
| TraesCS1A01G436300.1 | Wheat | mitochondrion | 33.55 | 26.84 |
| TraesCS2A01G266100.1 | Wheat | cytosol | 28.95 | 26.67 |
| TraesCS2B01G276000.1 | Wheat | cytosol, nucleus, plastid | 32.89 | 26.6 |
| TraesCS1A01G436400.1 | Wheat | plastid | 32.89 | 26.45 |
| Zm00001d013178_P001 | Maize | cytosol | 32.24 | 26.34 |
| HORVU5Hr1G093900.1 | Barley | plastid | 30.26 | 26.29 |
| HORVU5Hr1G098260.1 | Barley | cytosol, mitochondrion | 36.84 | 26.17 |
| TraesCS1D01G444700.1 | Wheat | cytosol, extracellular, peroxisome, plastid | 31.58 | 25.81 |
| HORVU2Hr1G061800.1 | Barley | plastid | 32.24 | 25.79 |
| EER95817 | Sorghum | nucleus | 32.89 | 25.77 |
| Os07t0123100-00 | Rice | extracellular | 34.21 | 25.37 |
| Zm00001d018717_P001 | Maize | cytosol | 31.58 | 24.74 |
| AT1G76600.1 | Thale cress | nucleus | 34.87 | 24.54 |
| AT1G21010.1 | Thale cress | cytosol | 32.24 | 23.33 |
| Zm00001d007974_P001 | Maize | nucleus | 28.29 | 22.28 |
| TraesCS5A01G403900.1 | Wheat | plastid | 32.89 | 21.46 |
| HORVU2Hr1G061850.1 | Barley | extracellular, plastid | 20.39 | 15.66 |
Protein Annotations
| MapMan:35.2 | EntrezGene:824244 | UniProt:A0A178VE84 | ProteinID:AEE78711.1 | ArrayExpress:AT3G50800 | EnsemblPlantsGene:AT3G50800 |
| RefSeq:AT3G50800 | TAIR:AT3G50800 | RefSeq:AT3G50800-TAIR-G | EnsemblPlants:AT3G50800.1 | TAIR:AT3G50800.1 | EMBL:BT004127 |
| EMBL:BT004986 | ProteinID:CAB42909.1 | InterPro:DUF4228_plant | GO:GO:0005575 | RefSeq:NP_190649.1 | ProteinID:OAP04620.1 |
| PFAM:PF14009 | PO:PO:0000293 | PANTHER:PTHR33052 | PANTHER:PTHR33052:SF17 | UniProt:Q9SVL8 | UniParc:UPI000000C296 |
| SEG:seg | : | : | : | : | : |
Description
Uncharacterized protein At3g50800 [Source:UniProtKB/TrEMBL;Acc:Q9SVL8]
Coordinates
chr3:-:18882112..18883033
Molecular Weight (calculated)
16279.3 Da
IEP (calculated)
7.091
GRAVY (calculated)
-0.354
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MGACASRESR RTETAKLILP DGTLQEFSTP VKVWQILQKN PTSFVCNSDD MDFDDAVLAV PGSEDLRPGE LYFVLPLTWL NHPLRADEMA ALAVKASSAL
101: AKSGGGGLSY NDEDVGECRV RRVKRNGCGG RGCGGGGKGR RKFTAELSSI AE
101: AKSGGGGLSY NDEDVGECRV RRVKRNGCGG RGCGGGGKGR RKFTAELSSI AE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.