Factsheet for HORVU5Hr1G098290.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G001280.1
HORVU0Hr1G018470.1
HORVU0Hr1G025410.1
HORVU1Hr1G008160.1
HORVU2Hr1G016740.4
HORVU2Hr1G056160.5
HORVU2Hr1G067660.1
HORVU2Hr1G112000.1
HORVU3Hr1G021300.1
HORVU3Hr1G038010.1
HORVU3Hr1G054660.1
HORVU3Hr1G079210.4
HORVU3Hr1G113750.1
HORVU4Hr1G026290.3
HORVU4Hr1G047410.2
HORVU4Hr1G048730.1
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4
HORVU6Hr1G023630.1
HORVU7Hr1G078010.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G37240.1	HORVU0Hr1G018470.1	AT1G22920.1	21798944
AT4G37240.1	HORVU0Hr1G025410.1	AT1G22920.1	21798944
AT4G37240.1	HORVU1Hr1G008160.1	AT1G22920.1	21798944
AT4G37240.1	HORVU2Hr1G056160.5	AT1G22920.1	21798944
AT4G37240.1	HORVU2Hr1G067660.1	AT1G22920.1	21798944
AT4G37240.1	HORVU2Hr1G112000.1	AT1G22920.1	21798944
AT4G37240.1	HORVU3Hr1G021300.1	AT1G22920.1	21798944
AT4G37240.1	HORVU3Hr1G054660.1	AT1G22920.1	21798944
AT4G37240.1	HORVU3Hr1G113750.1	AT1G22920.1	21798944
AT4G37240.1	HORVU4Hr1G047410.2	AT1G22920.1	21798944
AT4G37240.1	HORVU4Hr1G048730.1	AT1G22920.1	21798944
AT4G37240.1	HORVU6Hr1G023630.1	AT1G22920.1	21798944
AT4G37240.1	HORVU7Hr1G078010.1	AT1G22920.1	21798944
AT4G37240.1	HORVU0Hr1G001280.1	AT2G41090.1	17360592
AT4G37240.1	HORVU2Hr1G016740.4	AT2G41090.1	17360592
AT4G37240.1	HORVU3Hr1G038010.1	AT2G41090.1	17360592
AT4G37240.1	HORVU3Hr1G079210.4	AT2G41090.1	17360592
AT4G37240.1	HORVU4Hr1G026290.3	AT2G41090.1	17360592
AT4G37240.1	HORVU5Hr1G014060.1	AT2G41090.1	17360592
AT4G37240.1	HORVU5Hr1G014070.2	AT2G41090.1	17360592
AT4G37240.1	HORVU5Hr1G044710.4	AT2G41090.1	17360592
AT4G37240.1	HORVU0Hr1G001280.1	AT2G41100.1	17360592
AT4G37240.1	HORVU2Hr1G016740.4	AT2G41100.1	17360592
AT4G37240.1	HORVU3Hr1G038010.1	AT2G41100.1	17360592
AT4G37240.1	HORVU3Hr1G079210.4	AT2G41100.1	17360592
AT4G37240.1	HORVU4Hr1G026290.3	AT2G41100.1	17360592
AT4G37240.1	HORVU5Hr1G014060.1	AT2G41100.1	17360592
AT4G37240.1	HORVU5Hr1G014070.2	AT2G41100.1	17360592
AT4G37240.1	HORVU5Hr1G044710.4	AT2G41100.1	17360592
AT4G37240.1	HORVU0Hr1G001280.1	AT5G21274.1	17360592
AT4G37240.1	HORVU2Hr1G016740.4	AT5G21274.1	17360592
AT4G37240.1	HORVU3Hr1G038010.1	AT5G21274.1	17360592
AT4G37240.1	HORVU3Hr1G079210.4	AT5G21274.1	17360592
AT4G37240.1	HORVU4Hr1G026290.3	AT5G21274.1	17360592
AT4G37240.1	HORVU5Hr1G014060.1	AT5G21274.1	17360592
AT4G37240.1	HORVU5Hr1G014070.2	AT5G21274.1	17360592
AT4G37240.1	HORVU5Hr1G044710.4	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G409000.1	Wheat	cytosol	88.64	91.23
HORVU5Hr1G098280.1	Barley	cytosol	90.34	90.34
TraesCS5D01G414100.1	Wheat	cytosol	87.5	86.03
TraesCS5A01G404000.1	Wheat	cytosol	84.66	83.24
HORVU5Hr1G098260.1	Barley	cytosol, mitochondrion	85.8	70.56
Os03t0768900-00	Rice	cytosol	67.61	67.61
Zm00001d034190_P001	Maize	cytosol	65.91	63.74
EER93387	Sorghum	cytosol	67.61	63.3
Zm00001d013178_P001	Maize	cytosol	65.91	62.37
HORVU2Hr1G061800.1	Barley	plastid	59.66	55.26
HORVU1Hr1G094330.1	Barley	cytosol	55.68	52.41
GSMUA_Achr2P08730_001	Banana	cytosol	37.5	39.76
GSMUA_Achr7P27420_001	Banana	cytosol	36.36	38.79
HORVU5Hr1G093900.1	Barley	plastid	35.8	36.0
CDY45243	Canola	cytosol	27.84	35.0
Solyc02g089990.1.1	Tomato	nucleus	31.82	34.78
KRH76906	Soybean	cytosol	31.25	34.59
PGSC0003DMT400026013	Potato	cytosol, nucleus, plastid	31.82	34.57
VIT_00s0207g00140.t01	Wine grape	cytosol	31.82	34.36
Solyc03g044860.1.1	Tomato	cytosol	28.41	34.25
PGSC0003DMT400059007	Potato	cytosol, nucleus, plastid	27.84	33.79
CDX77946	Canola	cytosol	28.41	33.78
Bra031814.1-P	Field mustard	cytosol	28.98	33.77
CDY55087	Canola	cytosol	28.98	33.77
KRH28562	Soybean	cytosol	31.25	33.74
VIT_00s0207g00180.t01	Wine grape	cytosol	31.25	33.74
AT3G50800.1	Thale cress	cytosol, nucleus, plastid	28.98	33.55
PGSC0003DMT400007187	Potato	cytosol	28.98	33.55
Solyc02g065430.1.1	Tomato	cytosol	28.98	33.55
HORVU5Hr1G074010.1	Barley	plastid	34.66	33.15
Bra036862.1-P	Field mustard	cytosol	27.84	33.11
CDX81387	Canola	cytosol	28.98	32.9
Bra012084.1-P	Field mustard	cytosol	26.14	32.86
CDX73789	Canola	cytosol	28.41	32.68
Bra017789.1-P	Field mustard	nucleus	31.25	32.16
CDX72612	Canola	nucleus	31.25	32.16
HORVU2Hr1G061850.1	Barley	extracellular, plastid	35.8	31.82
CDY18612	Canola	cytosol	27.84	31.61
Bra037163.1-P	Field mustard	cytosol	27.84	31.61
CDY42708	Canola	nucleus	30.68	31.58
AT5G66580.1	Thale cress	cytosol	27.84	31.41
CDY28982	Canola	nucleus	27.84	31.41
CDY46066	Canola	cytosol	28.98	31.29
CDX90684	Canola	cytosol, nucleus, plastid	27.27	30.77
Bra012887.1-P	Field mustard	cytosol, nucleus, plastid	27.27	30.77
CDX76853	Canola	cytosol	28.41	30.49
AT4G37240.1	Thale cress	cytosol, nucleus, plastid	28.98	30.36
Bra039208.1-P	Field mustard	cytosol	23.86	30.22
CDX89594	Canola	cytosol	27.84	30.06
Bra032151.1-P	Field mustard	cytosol	27.84	30.06
CDY39665	Canola	cytosol	27.84	30.06
HORVU6Hr1G034380.1	Barley	plastid	32.39	29.84
KRH08345	Soybean	cytosol	28.98	29.82
AT2G23690.1	Thale cress	cytosol	27.27	29.45
CDY28078	Canola	cytosol	26.7	29.38
HORVU6Hr1G034360.1	Barley	mitochondrion, plastid	28.98	29.14
KRH69989	Soybean	cytosol	27.27	29.09
CDY22462	Canola	cytosol, nucleus, plastid	28.41	28.9
VIT_03s0063g01940.t01	Wine grape	cytosol	28.41	28.74
CDY24764	Canola	cytosol, nucleus, plastid	27.84	28.32
Bra010578.1-P	Field mustard	cytosol, nucleus, plastid	23.86	28.0
CDX69254	Canola	cytosol	27.84	27.53
Bra011715.1-P	Field mustard	nucleus	27.27	27.43
CDX75606	Canola	nucleus	27.27	27.43
HORVU7Hr1G093080.1	Barley	plastid	31.82	26.54
HORVU7Hr1G093050.1	Barley	mitochondrion, plastid	31.82	26.42
HORVU5Hr1G074030.1	Barley	cytosol, mitochondrion	32.95	24.79
HORVU5Hr1G074020.1	Barley	nucleus	32.39	23.65
HORVU6Hr1G034350.1	Barley	cytosol	27.84	23.33

Protein Annotations

EnsemblPlants:HORVU5Hr1G098290.1	EnsemblPlantsGene:HORVU5Hr1G098290	InterPro:DUF4228_plant	PANTHER:PTHR33052	PANTHER:PTHR33052:SF63	PFAM:PF14009
SEG:seg	UniParc:UPI000296D543	UniProt:M0XM98	MapMan:35.2	:	:

Description

No Description!

Coordinates

chrchr5H:-:606928287..606929985

Molecular Weight (calculated)

18533.1 Da

IEP (calculated)

5.341

GRAVY (calculated)

0.022

Length

176 amino acids

Sequence
(BLAST)

001: MGLCVSYDAA ADGAVTARVV LPSGELREYS PPATAALALE EVGQKGWFLC DADRMGFEGS VVAVAAGELL QPGQIYFVLP AEMLRRCLTR DEVASLAVKA
101: SAALVKAATA SSAGGRRRRG SVAPLVFAPS EEDYSDETLA TFAVKPAAPQ KRRVAYRGGR SPPRFSPDLT AILESE

Best Arabidopsis Sequence Match ( AT1G76600.1 )
(BLAST)

001: MGLCVSVNRN EYVSSSTTAK IVTINGDLRE YDVPVLASQV LESESTSSSS SSSSSSYFLC NSDSLYYDDF IPAIESDEIL QANQIYFVLP ISKRQYRLSA
101: SDMAALAVKA SVAIEKAAGK KNRRRRSGRI SPVVTLNQAN DNRIAAVNNR IGGEATNMMM QKGKLPNRTT PFKDTNGYSR SGSVRKLKRY TSGRAKLAVR
201: SFRLRLSTIY EGSSFN

Arabidopsis Description

Poly polymerase [Source:UniProtKB/TrEMBL;Acc:Q9C9J8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.