CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012084.1-P	Field mustard	cytosol	94.29	94.29
CDY18612	Canola	cytosol	89.29	80.65
CDX81387	Canola	cytosol	88.57	80.0
AT5G66580.1	Thale cress	cytosol	88.57	79.49
CDY55087	Canola	cytosol	82.14	76.16
CDX77946	Canola	cytosol	67.86	64.19
CDX73789	Canola	cytosol	69.29	63.4
CDY28982	Canola	nucleus	69.29	62.18
CDX90684	Canola	cytosol, nucleus, plastid	69.29	62.18
CDY28078	Canola	cytosol	65.71	57.5
CDY24764	Canola	cytosol, nucleus, plastid	57.14	46.24
CDY22462	Canola	cytosol, nucleus, plastid	56.43	45.66
CDY39665	Canola	cytosol	52.86	45.4
CDX89594	Canola	cytosol	52.86	45.4
CDY42708	Canola	nucleus	55.0	45.03
CDX72612	Canola	nucleus	54.29	44.44
CDY46066	Canola	cytosol	50.0	42.94
CDX76853	Canola	cytosol	49.29	42.07
CDX75606	Canola	nucleus	51.43	41.14
CDX69254	Canola	cytosol	51.43	40.45
GSMUA_Achr2P08730_001	Banana	cytosol	47.14	39.76
GSMUA_Achr7P27420_001	Banana	cytosol	45.71	38.79
Zm00001d013311_P001	Maize	plastid	37.86	33.12
Os03t0740200-00	Rice	plastid	39.29	32.35
TraesCS5A01G379900.1	Wheat	plastid	37.86	31.74
TraesCS5D01G389400.1	Wheat	plastid	37.86	31.36
TraesCS5B01G383500.1	Wheat	plastid	37.86	30.81
KXG37596	Sorghum	cytosol, nucleus, plastid	36.43	30.54
Zm00001d033943_P001	Maize	plastid	35.71	30.12
TraesCS5B01G409000.1	Wheat	cytosol	35.71	29.24
TraesCS5D01G414100.1	Wheat	cytosol	37.14	29.05
TraesCS5D01G414200.1	Wheat	cytosol	36.43	28.98
Os03t0768900-00	Rice	cytosol	36.43	28.98
HORVU5Hr1G098280.1	Barley	cytosol	36.43	28.98
TraesCS5D01G414000.1	Wheat	cytosol	36.43	28.49
TraesCS5A01G404200.1	Wheat	cytosol	35.71	28.41
TraesCS5D01G414300.1	Wheat	cytosol	35.71	28.41
TraesCS1B01G471500.1	Wheat	mitochondrion	37.14	28.11
Zm00001d034190_P001	Maize	cytosol	36.43	28.02
TraesCS1D01G444800.1	Wheat	cytosol, plastid	37.14	27.96
TraesCS5A01G404000.1	Wheat	cytosol	35.71	27.93
HORVU5Hr1G098290.1	Barley	cytosol	35.0	27.84
TraesCS5A01G404100.1	Wheat	cytosol	35.0	27.84
HORVU1Hr1G094330.1	Barley	cytosol	37.14	27.81
TraesCS5B01G408700.1	Wheat	cytosol	36.43	27.72
TraesCS1A01G436400.1	Wheat	plastid	37.14	27.51
TraesCS1D01G444700.1	Wheat	cytosol, extracellular, peroxisome, plastid	36.43	27.42
TraesCS1A01G436300.1	Wheat	mitochondrion	37.14	27.37
TraesCS5B01G408800.1	Wheat	cytosol	34.29	27.27
TraesCS2B01G276100.1	Wheat	cytosol, extracellular, plastid	36.43	27.13
TraesCS2D01G257800.1	Wheat	plastid	37.14	27.08
HORVU5Hr1G093900.1	Barley	plastid	33.57	26.86
EER93387	Sorghum	cytosol	35.71	26.6
TraesCS2A01G266000.1	Wheat	plastid	36.43	26.56
Zm00001d013178_P001	Maize	cytosol	35.0	26.34
EER95817	Sorghum	nucleus	36.43	26.29
TraesCS2D01G257700.1	Wheat	mitochondrion, nucleus, plastid	35.0	26.06
TraesCS2A01G266100.1	Wheat	cytosol	30.71	26.06
HORVU2Hr1G061800.1	Barley	plastid	35.0	25.79
TraesCS2B01G276000.1	Wheat	cytosol, nucleus, plastid	34.29	25.53
CDY33663	Canola	cytosol	37.14	25.12
HORVU5Hr1G098260.1	Barley	cytosol, mitochondrion	37.86	24.77
CDX96609	Canola	cytosol	37.14	24.76
CDY45978	Canola	nucleus	37.14	24.53
CDY20399	Canola	nucleus, plastid	37.14	24.41
Zm00001d018717_P001	Maize	cytosol	33.57	24.23
CDX85960	Canola	cytosol	35.71	24.04
CDX68092	Canola	cytosol, plastid	35.71	23.81
CDY01339	Canola	nucleus	35.0	23.67
CDY00357	Canola	nucleus	34.29	23.19
Os07t0123100-00	Rice	extracellular	33.57	22.93
TraesCS5A01G403900.1	Wheat	plastid	37.14	22.32
Zm00001d007974_P001	Maize	nucleus	30.0	21.76
CDY04592	Canola	plastid	36.43	21.16
CDY29485	Canola	plastid	36.43	21.07
CDY06423	Canola	cytosol	23.57	20.5
HORVU2Hr1G061850.1	Barley	extracellular, plastid	21.43	15.15

Protein Annotations

EnsemblPlants:CDY45243	EnsemblPlantsGene:GSBRNA2T00081681001	InterPro:DUF4228_plant	PANTHER:PTHR33052	PANTHER:PTHR33052:SF17	PFAM:PF14009
ProteinID:CDY45243	ProteinID:CDY45243.1	UniParc:UPI0004EDE9C3	UniProt:A0A078I7X1	MapMan:35.2	:

Description

BnaA07g12470DBnaA07g12470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I7X1]

Coordinates

chrLK032618:+:179410..179832

Molecular Weight (calculated)

15186.0 Da

IEP (calculated)

5.197

GRAVY (calculated)

-0.146

Length

140 amino acids

Sequence
(BLAST)

001: MGACVSRESM RGDSAKLILL DGTLQEFSTP VKVWQILQKY PSSFVCNSDE MDFDDAVSAV SGDEELRSGQ LYFVLPLTWL NHPLRAEEMA ALAVKASSAL
101: TKSGGVGWVA GDRDNSKNIV GVKTNVRGGR FTRNLSTIAE

Best Arabidopsis Sequence Match ( AT5G66580.1 )
(BLAST)

001: MGACASRESL RSDSAKLILL DGTLQEFSSP VKVWQILQKN PTSFVCNSDE MDFDDAVSAV AGNEELRSGQ LYFVLPLTWL NHPLRAEEMA ALAVKASSAL
101: TKSGGVGWVS GDDDVTTSEK TYQKKNIAGV KTNGGGGRGC GKGKRRFTAN LSTIAE

Arabidopsis Description

Uncharacterized protein At5g66580 [Source:UniProtKB/TrEMBL;Acc:Q9FJY2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.