Factsheet for Zm00001d034190_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d002027_P002
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d028948_P001
Zm00001d033980_P001
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d052415_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G37240.1	Zm00001d002027_P002	AT1G22920.1	21798944
AT4G37240.1	Zm00001d005003_P002	AT2G41090.1	17360592
AT4G37240.1	Zm00001d008278_P001	AT2G41090.1	17360592
AT4G37240.1	Zm00001d010649_P001	AT2G41090.1	17360592
AT4G37240.1	Zm00001d028948_P001	AT2G41090.1	17360592
AT4G37240.1	Zm00001d038543_P004	AT2G41090.1	17360592
AT4G37240.1	Zm00001d038545_P001	AT2G41090.1	17360592
AT4G37240.1	Zm00001d041430_P001	AT2G41090.1	17360592
AT4G37240.1	Zm00001d043144_P001	AT2G41090.1	17360592
AT4G37240.1	Zm00001d047597_P001	AT2G41090.1	17360592
AT4G37240.1	Zm00001d052415_P001	AT2G41090.1	17360592
AT4G37240.1	Zm00001d005003_P002	AT2G41100.1	17360592
AT4G37240.1	Zm00001d008278_P001	AT2G41100.1	17360592
AT4G37240.1	Zm00001d010649_P001	AT2G41100.1	17360592
AT4G37240.1	Zm00001d028948_P001	AT2G41100.1	17360592
AT4G37240.1	Zm00001d038543_P004	AT2G41100.1	17360592
AT4G37240.1	Zm00001d038545_P001	AT2G41100.1	17360592
AT4G37240.1	Zm00001d041430_P001	AT2G41100.1	17360592
AT4G37240.1	Zm00001d043144_P001	AT2G41100.1	17360592
AT4G37240.1	Zm00001d047597_P001	AT2G41100.1	17360592
AT4G37240.1	Zm00001d052415_P001	AT2G41100.1	17360592
AT4G37240.1	Zm00001d033980_P001	AT4G14640.1	17360592
AT4G37240.1	Zm00001d005003_P002	AT5G21274.1	17360592
AT4G37240.1	Zm00001d008278_P001	AT5G21274.1	17360592
AT4G37240.1	Zm00001d010649_P001	AT5G21274.1	17360592
AT4G37240.1	Zm00001d028948_P001	AT5G21274.1	17360592
AT4G37240.1	Zm00001d038543_P004	AT5G21274.1	17360592
AT4G37240.1	Zm00001d038545_P001	AT5G21274.1	17360592
AT4G37240.1	Zm00001d041430_P001	AT5G21274.1	17360592
AT4G37240.1	Zm00001d043144_P001	AT5G21274.1	17360592
AT4G37240.1	Zm00001d047597_P001	AT5G21274.1	17360592
AT4G37240.1	Zm00001d052415_P001	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93387	Sorghum	cytosol	90.11	87.23
Zm00001d013178_P001	Maize	cytosol	85.16	83.33
Os03t0768900-00	Rice	cytosol	69.78	72.16
TraesCS5A01G404200.1	Wheat	cytosol	64.84	67.05
HORVU5Hr1G098290.1	Barley	cytosol	63.74	65.91
HORVU5Hr1G098280.1	Barley	cytosol	63.74	65.91
TraesCS5D01G414300.1	Wheat	cytosol	63.74	65.91
TraesCS5D01G414200.1	Wheat	cytosol	63.19	65.34
TraesCS5D01G414000.1	Wheat	cytosol	63.74	64.8
TraesCS5A01G404100.1	Wheat	cytosol	62.09	64.2
TraesCS5B01G408800.1	Wheat	cytosol	62.09	64.2
TraesCS5B01G409000.1	Wheat	cytosol	59.89	63.74
TraesCS5D01G414100.1	Wheat	cytosol	62.09	63.13
TraesCS5B01G408700.1	Wheat	cytosol	63.74	63.04
TraesCS5A01G404000.1	Wheat	cytosol	61.54	62.57
HORVU5Hr1G098260.1	Barley	cytosol, mitochondrion	59.34	50.47
Zm00001d013311_P001	Maize	plastid	43.41	49.38
TraesCS5A01G403900.1	Wheat	plastid	62.64	48.93
Zm00001d033943_P001	Maize	plastid	44.51	48.8
Zm00001d018717_P001	Maize	cytosol	50.55	47.42
Zm00001d007974_P001	Maize	nucleus	46.15	43.52
GSMUA_Achr2P08730_001	Banana	cytosol	37.91	41.57
GSMUA_Achr7P27420_001	Banana	cytosol	36.26	40.0
PGSC0003DMT400026013	Potato	cytosol, nucleus, plastid	34.62	38.89
Solyc02g089990.1.1	Tomato	nucleus	34.07	38.51
PGSC0003DMT400059007	Potato	cytosol, nucleus, plastid	29.67	37.24
Solyc03g044860.1.1	Tomato	cytosol	29.67	36.99
CDY45243	Canola	cytosol	28.02	36.43
VIT_00s0207g00140.t01	Wine grape	cytosol	31.87	35.58
VIT_00s0207g00180.t01	Wine grape	cytosol	31.87	35.58
CDX81387	Canola	cytosol	29.67	34.84
KRH76906	Soybean	cytosol	30.22	34.59
Bra012084.1-P	Field mustard	cytosol	26.37	34.29
Solyc02g065430.1.1	Tomato	cytosol	28.57	34.21
PGSC0003DMT400007187	Potato	cytosol	28.57	34.21
AT4G37240.1	Thale cress	cytosol, nucleus, plastid	31.32	33.93
CDX77946	Canola	cytosol	27.47	33.78
CDY46066	Canola	cytosol	30.22	33.74
Bra037163.1-P	Field mustard	cytosol	28.57	33.55
CDY18612	Canola	cytosol	28.57	33.55
AT5G66580.1	Thale cress	cytosol	28.57	33.33
Bra032151.1-P	Field mustard	cytosol	29.67	33.13
CDY39665	Canola	cytosol	29.67	33.13
Bra031814.1-P	Field mustard	cytosol	27.47	33.11
CDY55087	Canola	cytosol	27.47	33.11
Bra036862.1-P	Field mustard	cytosol	26.92	33.11
CDX76853	Canola	cytosol	29.67	32.93
AT3G50800.1	Thale cress	cytosol, nucleus, plastid	27.47	32.89
Bra017789.1-P	Field mustard	nucleus	30.77	32.75
CDY28982	Canola	nucleus	28.02	32.69
CDX73789	Canola	cytosol	27.47	32.68
KRH28562	Soybean	cytosol	29.12	32.52
AT2G23690.1	Thale cress	cytosol	29.12	32.52
Bra039208.1-P	Field mustard	cytosol	24.73	32.37
CDY22462	Canola	cytosol, nucleus, plastid	30.77	32.37
CDY42708	Canola	nucleus	30.22	32.16
CDX72612	Canola	nucleus	30.22	32.16
Bra012887.1-P	Field mustard	cytosol, nucleus, plastid	27.47	32.05
CDX90684	Canola	cytosol, nucleus, plastid	27.47	32.05
CDX89594	Canola	cytosol	28.57	31.9
CDY24764	Canola	cytosol, nucleus, plastid	30.22	31.79
Bra010578.1-P	Field mustard	cytosol, nucleus, plastid	25.27	30.67
CDY28078	Canola	cytosol	26.92	30.62
VIT_03s0063g01940.t01	Wine grape	cytosol	29.12	30.46
KRH08345	Soybean	cytosol	28.57	30.41
CDX69254	Canola	cytosol	29.12	29.78
Bra011715.1-P	Field mustard	nucleus	28.57	29.71
CDX75606	Canola	nucleus	28.57	29.71
KRH69989	Soybean	cytosol	26.92	29.7
Zm00001d046687_P001	Maize	plastid	29.67	25.84
Zm00001d020967_P001	Maize	plastid	32.42	25.21
Zm00001d036787_P001	Maize	plastid	29.12	24.42
Zm00001d020968_P001	Maize	plastid	29.12	23.35
Zm00001d015867_P001	Maize	plastid	26.37	22.43

Protein Annotations

EnsemblPlants:Zm00001d034190_P001	EnsemblPlants:Zm00001d034190_T001	EnsemblPlantsGene:Zm00001d034190	EntrezGene:103644071	InterPro:DUF4228_plant	PANTHER:PTHR33052
PANTHER:PTHR33052:SF63	PFAM:PF14009	ProteinID:ONM09774.1	SEG:seg	UniParc:UPI000221F2A9	UniProt:A0A1D6L644
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr1:+:286166897..286167445

Molecular Weight (calculated)

18836.4 Da

IEP (calculated)

5.352

GRAVY (calculated)

-0.014

Length

182 amino acids

Sequence
(BLAST)

001: MGICVSCDAA DEGAATARVV LPSGELREYA PPATAGTALQ AAGGEGPWLL CDADGMAFEG PVAVAAVAPG EELQAGQIYF VLPAEMRRRR LTREEVAALA
101: VRASSALVKA AAAAQPSSPC RRLRRGAVAP LVFPVPEEEY AAADAVSPVA AKPHQKRRVA CRGGRASRFS PDLTAIPETE SE

Best Arabidopsis Sequence Match ( AT1G76600.1 )
(BLAST)

001: MGLCVSVNRN EYVSSSTTAK IVTINGDLRE YDVPVLASQV LESESTSSSS SSSSSSYFLC NSDSLYYDDF IPAIESDEIL QANQIYFVLP ISKRQYRLSA
101: SDMAALAVKA SVAIEKAAGK KNRRRRSGRI SPVVTLNQAN DNRIAAVNNR IGGEATNMMM QKGKLPNRTT PFKDTNGYSR SGSVRKLKRY TSGRAKLAVR
201: SFRLRLSTIY EGSSFN

Arabidopsis Description

Poly polymerase [Source:UniProtKB/TrEMBL;Acc:Q9C9J8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.