Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG37587 | Sorghum | cytosol | 77.71 | 79.22 |
| Os03t0743500-02 | Rice | nucleus | 75.16 | 76.62 |
| Zm00001d008278_P001 | Maize | cytosol | 52.23 | 64.57 |
| TraesCS5A01G382800.2 | Wheat | plastid | 73.89 | 62.03 |
| Zm00001d047597_P001 | Maize | cytosol | 52.23 | 55.78 |
| KRG92449 | Soybean | cytosol | 52.87 | 55.33 |
| Zm00001d038545_P001 | Maize | cytosol, mitochondrion | 52.23 | 55.03 |
| PGSC0003DMT400042062 | Potato | cytosol | 52.23 | 54.67 |
| KRH34350 | Soybean | cytosol | 52.23 | 54.67 |
| Solyc06g053930.2.1 | Tomato | cytosol | 51.59 | 54.36 |
| VIT_05s0020g04420.t01 | Wine grape | cytosol | 51.59 | 54.36 |
| KRH69070 | Soybean | cytosol | 51.59 | 54.0 |
| KRH31638 | Soybean | cytosol | 51.59 | 54.0 |
| GSMUA_AchrUn_... | Banana | cytosol | 50.32 | 53.74 |
| CDX92965 | Canola | cytosol | 52.23 | 53.25 |
| Bra001892.1-P | Field mustard | cytosol | 52.23 | 53.25 |
| CDY34215 | Canola | cytosol | 51.59 | 51.92 |
| Bra023786.1-P | Field mustard | cytosol | 51.59 | 51.92 |
| GSMUA_Achr7P07720_001 | Banana | cytosol | 48.41 | 51.35 |
| AT4G14640.1 | Thale cress | cytosol | 49.04 | 50.99 |
| Bra033898.1-P | Field mustard | cytosol | 50.32 | 50.97 |
| CDY10686 | Canola | cytosol | 50.32 | 50.97 |
| PGSC0003DMT400034833 | Potato | cytosol | 48.41 | 49.67 |
| CDY06478 | Canola | cytosol | 47.13 | 49.01 |
| Zm00001d041430_P001 | Maize | cytosol | 52.23 | 48.52 |
| Zm00001d038543_P004 | Maize | plastid | 52.23 | 48.52 |
| Bra039723.1-P | Field mustard | cytosol | 47.13 | 48.37 |
| VIT_14s0030g02150.t01 | Wine grape | cytosol | 47.13 | 48.37 |
| KRH68729 | Soybean | cytosol | 45.86 | 48.32 |
| VIT_00s0179g00280.t01 | Wine grape | cytosol | 45.86 | 48.32 |
| KRH67274 | Soybean | cytosol | 45.22 | 47.97 |
| Solyc03g005240.1.1 | Tomato | cytosol | 46.5 | 47.71 |
| KRG96966 | Soybean | cytosol | 45.22 | 47.65 |
| AT3G22930.1 | Thale cress | cytosol | 51.59 | 46.82 |
| KRG95596 | Soybean | cytosol | 43.95 | 46.62 |
| PGSC0003DMT400083727 | Potato | cytosol | 43.31 | 46.26 |
| Solyc01g105630.2.1 | Tomato | cytosol | 42.68 | 45.58 |
| CDY40824 | Canola | cytosol | 51.59 | 45.0 |
| KRH34082 | Soybean | cytosol | 42.68 | 44.97 |
| KRG92667 | Soybean | cytosol | 41.4 | 43.62 |
| Zm00001d052415_P001 | Maize | cytosol | 42.68 | 42.41 |
| KRH71363 | Soybean | cytosol | 40.13 | 42.28 |
| Zm00001d028948_P001 | Maize | cytosol | 52.23 | 41.62 |
| CDX94883 | Canola | cytosol | 29.3 | 41.44 |
| CDY10325 | Canola | cytosol | 29.3 | 40.71 |
| Zm00001d043144_P001 | Maize | plasma membrane | 45.22 | 38.8 |
| KRG94637 | Soybean | cytosol | 28.03 | 38.6 |
| KRH32074 | Soybean | cytosol | 36.31 | 38.26 |
| Zm00001d005003_P002 | Maize | cytosol | 41.4 | 36.11 |
| Zm00001d053188_P001 | Maize | cytosol | 24.84 | 35.78 |
| Zm00001d010649_P001 | Maize | extracellular | 28.03 | 30.99 |
| Zm00001d035095_P001 | Maize | cytosol, extracellular, mitochondrion | 26.75 | 28.38 |
| Zm00001d049665_P001 | Maize | cytosol, extracellular, mitochondrion, plasma membrane | 26.75 | 28.38 |
| Zm00001d039110_P001 | Maize | cytosol | 29.94 | 27.33 |
| Zm00001d014271_P001 | Maize | cytosol | 29.3 | 25.7 |
| Zm00001d022160_P003 | Maize | cytosol, mitochondrion | 27.39 | 25.0 |
| Zm00001d044411_P001 | Maize | plastid | 31.21 | 20.94 |
| KXG37588 | Sorghum | mitochondrion, nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Zm00001d033980_P001 | EnsemblPlants:Zm00001d033980_T001 | EnsemblPlantsGene:Zm00001d033980 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23050 |
| PANTHER:PTHR23050:SF198 | PFAM:PF13499 | PFAM:PF13833 | PFscan:PS50222 | ProteinID:ONM09075.1 | ScanProsite:PS00018 |
| SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI0008427776 | UniProt:A0A1D6L3Q6 | MapMan:35.1 | : |
Description
ustilago maydis induced12 ustilago maydis induced12
Coordinates
chr1:+:279980867..279981749
Molecular Weight (calculated)
17576.1 Da
IEP (calculated)
4.096
GRAVY (calculated)
-0.289
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MEELAAVTRS LGLDPSDQEL NDMMSEVDTD GNGIIDFQEF LSLIARKMKA SLSLICLSRI LPKLTIAVRK LTAHLLRCLQ DGDGDEELKE AFEVLDKDQN
101: GFISPVELRT VMTSLGEKMT DEEVEQMIRE ADTDGDGQVN YDEFVLMMKN AERKISG
101: GFISPVELRT VMTSLGEKMT DEEVEQMIRE ADTDGDGQVN YDEFVLMMKN AERKISG
001: MADQLTDEQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMAKKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVEEMIREAD VDGDGQINYE EFVKIMMAK
101: ISAAELRHVM TNLGEKLTDE EVEEMIREAD VDGDGQINYE EFVKIMMAK
Arabidopsis Description
CAM4Calmodulin 4 [Source:UniProtKB/TrEMBL;Acc:F4IEU4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.