Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER95753 | Sorghum | nucleus | 83.93 | 94.81 |
| Zm00001d018667_P003 | Maize | nucleus | 83.28 | 93.73 |
| KRH75125 | Soybean | nucleus | 18.69 | 93.44 |
| TraesCS2D01G262700.1 | Wheat | nucleus | 76.72 | 86.35 |
| TraesCS2A01G261200.2 | Wheat | nucleus | 76.39 | 85.04 |
| Os07t0108900-02 | Rice | nucleus | 74.43 | 85.02 |
| TraesCS2B01G281000.1 | Wheat | nucleus | 76.07 | 84.67 |
| HORVU2Hr1G063800.7 | Barley | nucleus, plastid | 74.1 | 73.86 |
| Zm00001d013259_P002 | Maize | nucleus | 59.67 | 65.23 |
| Bra004361.1-P | Field mustard | nucleus | 38.69 | 62.43 |
| CDY19977 | Canola | nucleus | 20.66 | 61.76 |
| VIT_01s0011g00100.t01 | Wine grape | nucleus | 48.52 | 61.41 |
| KRH07467 | Soybean | nucleus | 46.56 | 60.17 |
| Zm00001d034045_P003 | Maize | nucleus | 56.72 | 59.45 |
| KRH45412 | Soybean | nucleus | 45.9 | 59.32 |
| Solyc06g069430.2.1 | Tomato | nucleus | 47.21 | 58.78 |
| PGSC0003DMT400072888 | Potato | nucleus | 46.56 | 58.2 |
| Solyc05g056620.1.1 | Tomato | nucleus | 46.56 | 58.2 |
| KRH70974 | Soybean | nucleus | 46.23 | 58.02 |
| VIT_17s0000g04990.t01 | Wine grape | nucleus | 46.23 | 58.02 |
| PGSC0003DMT400010451 | Potato | nucleus | 47.21 | 57.6 |
| Solyc03g114830.2.1 | Tomato | nucleus | 46.56 | 57.49 |
| PGSC0003DMT400063313 | Potato | nucleus | 46.23 | 56.85 |
| CDY34564 | Canola | nucleus | 40.33 | 56.42 |
| Bra025411.1-P | Field mustard | nucleus | 32.46 | 56.25 |
| CDY36077 | Canola | nucleus | 40.66 | 56.11 |
| VIT_14s0083g01030.t01 | Wine grape | nucleus | 44.92 | 55.47 |
| AT1G69120.1 | Thale cress | nucleus | 45.9 | 54.69 |
| CDY58690 | Canola | nucleus | 42.95 | 54.36 |
| CDX95960 | Canola | nucleus | 45.57 | 54.3 |
| CDY33554 | Canola | nucleus | 45.25 | 53.91 |
| AT5G60910.1 | Thale cress | nucleus | 42.62 | 53.72 |
| CDY65811 | Canola | nucleus | 44.92 | 53.52 |
| Bra038326.1-P | Field mustard | nucleus | 44.92 | 53.52 |
| CDY42841 | Canola | nucleus | 41.97 | 53.33 |
| Bra029347.1-P | Field mustard | nucleus | 41.97 | 53.33 |
| KRH63171 | Soybean | nucleus | 42.62 | 53.28 |
| KRH03173 | Soybean | nucleus | 41.64 | 53.14 |
| Bra012997.1-P | Field mustard | nucleus | 41.97 | 53.11 |
| CDY02185 | Canola | nucleus | 41.97 | 53.11 |
| KRH54740 | Soybean | nucleus | 41.97 | 52.46 |
| Bra035952.1-P | Field mustard | nucleus | 41.31 | 52.28 |
| CDY47002 | Canola | nucleus | 41.31 | 52.28 |
| CDY16832 | Canola | nucleus | 41.31 | 52.28 |
| PGSC0003DMT400003485 | Potato | nucleus | 42.3 | 52.23 |
| KRH56774 | Soybean | nucleus | 41.64 | 52.05 |
| PGSC0003DMT400068325 | Potato | nucleus | 39.67 | 51.71 |
| Solyc02g089210.2.1 | Tomato | nucleus | 42.3 | 51.6 |
| Zm00001d022088_P004 | Maize | nucleus | 43.61 | 51.55 |
| Bra011021.1-P | Field mustard | nucleus | 42.3 | 50.79 |
| AT1G26310.1 | Thale cress | nucleus | 42.3 | 50.59 |
| CDY04265 | Canola | nucleus | 45.25 | 49.82 |
| Bra004007.1-P | Field mustard | nucleus | 44.26 | 49.82 |
| Solyc02g065730.1.1 | Tomato | nucleus | 38.03 | 49.57 |
| Zm00001d003409_P001 | Maize | nucleus | 13.77 | 48.28 |
| CDY07357 | Canola | nucleus | 45.25 | 47.75 |
| KRH45099 | Soybean | nucleus | 38.69 | 47.58 |
| KRG93701 | Soybean | nucleus | 37.05 | 46.31 |
| KRH18331 | Soybean | nucleus | 36.39 | 45.49 |
| Zm00001d045231_P002 | Maize | nucleus | 33.44 | 45.33 |
| Bra036201.1-P | Field mustard | nucleus | 36.72 | 45.16 |
| CDY00082 | Canola | nucleus | 36.72 | 45.16 |
| CDX86353 | Canola | nucleus | 36.72 | 44.98 |
| KRH01382 | Soybean | nucleus | 37.05 | 44.66 |
| AT3G30260.1 | Thale cress | nucleus | 36.39 | 44.58 |
| CDY45899 | Canola | nucleus | 36.07 | 44.18 |
| Zm00001d021057_P001 | Maize | nucleus | 35.74 | 44.13 |
| Zm00001d031620_P001 | Maize | nucleus | 36.39 | 43.53 |
| Zm00001d006094_P001 | Maize | nucleus | 35.41 | 43.03 |
| Zm00001d034047_P007 | Maize | nucleus | 33.77 | 42.92 |
| Zm00001d045227_P001 | Maize | nucleus | 18.03 | 40.74 |
| Zm00001d048082_P001 | Maize | nucleus | 32.79 | 39.68 |
| Zm00001d028217_P001 | Maize | nucleus | 31.8 | 37.6 |
| Zm00001d023736_P001 | Maize | nucleus | 31.15 | 36.97 |
| Zm00001d051465_P002 | Maize | nucleus | 35.41 | 36.86 |
| Zm00001d017932_P002 | Maize | nucleus | 27.54 | 35.59 |
| CDX85287 | Canola | nucleus | 20.98 | 34.22 |
| Zm00001d016957_P003 | Maize | nucleus | 25.9 | 32.92 |
| Zm00001d042591_P002 | Maize | nucleus | 28.85 | 32.84 |
| Zm00001d023955_P003 | Maize | nucleus | 28.52 | 32.83 |
| Zm00001d017614_P003 | Maize | nucleus | 28.52 | 31.41 |
| Zm00001d041781_P001 | Maize | nucleus | 29.18 | 31.01 |
| CDY35780 | Canola | nucleus | 20.0 | 30.96 |
| Zm00001d039434_P001 | Maize | nucleus | 26.56 | 30.92 |
| Zm00001d050897_P002 | Maize | nucleus | 26.89 | 25.95 |
| Zm00001d037737_P001 | Maize | nucleus | 25.9 | 25.82 |
| Zm00001d008882_P001 | Maize | nucleus | 25.25 | 23.4 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EntrezGene:542257 | UniProt:A0A1D6FAE8 | ncoils:Coil | GO:GO:0000977 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 |
| GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR002487 | InterPro:IPR036879 | InterPro:MADS_MEF2-like | ProteinID:ONM28049.1 |
| PFAM:PF00319 | PFAM:PF01486 | PRINTS:PR00404 | ScanProsite:PS00350 | PFscan:PS50066 | PFscan:PS51297 |
| PANTHER:PTHR11945 | PANTHER:PTHR11945:SF275 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_Kbox | InterPro:TF_MADSbox |
| InterPro:TF_MADSbox_sf | UniParc:UPI000221FA29 | EnsemblPlantsGene:Zm00001d007949 | EnsemblPlants:Zm00001d007949_P001 | EnsemblPlants:Zm00001d007949_T001 | SEG:seg |
Description
zea apetala homolog1Agamous-like MADS-box protein AGL8
Coordinates
chr2:+:243898782..243908001
Molecular Weight (calculated)
34845.9 Da
IEP (calculated)
9.196
GRAVY (calculated)
-0.703
Length
305 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGKVQLKR IENKINRQVT FSKRRNGLLK KAHEISVLCD AEVAVIVFSP KGKLYEYATD SRMDKILERY ERYSYAEKAL ISAESESESS KFEVKCLPLS
101: VITITLYETA NISRPQNNWL CPLAPCMGNW CHEYRKLKAK IETIQKCHKH LMGEDLESLN PKELQQLEQQ LESSLKHIRS RKSHLMAESI SELQKKERSL
201: QEENKALQKE LAERQKAVAS RQQQVQWDQQ THAQAQTSSS SSSFMMRQDQ QGLPPPHNIC FPPLTMGDRG EELAAAAQQQ PLPGQAQPQL RIAGLPPWML
301: SHLNA
101: VITITLYETA NISRPQNNWL CPLAPCMGNW CHEYRKLKAK IETIQKCHKH LMGEDLESLN PKELQQLEQQ LESSLKHIRS RKSHLMAESI SELQKKERSL
201: QEENKALQKE LAERQKAVAS RQQQVQWDQQ THAQAQTSSS SSSFMMRQDQ QGLPPPHNIC FPPLTMGDRG EELAAAAQQQ PLPGQAQPQL RIAGLPPWML
301: SHLNA
001: MGRGRVELKR IENKINRQVT FSKRRTGLLK KAQEISVLCD AEVSLIVFSH KGKLFEYSSE SCMEKVLERY ERYSYAERQL IAPDSHVNAQ TNWSMEYSRL
101: KAKIELLERN QRHYLGEELE PMSLKDLQNL EQQLETALKH IRSRKNQLMN ESLNHLQRKE KEIQEENSML TKQIKERENI LRTKQTQCEQ LNRSVDDVPQ
201: PQPFQHPHLY MIAHQTSPFL NMGGLYQEED QTAMRRNNLD LTLEPIYNYL GCYAA
101: KAKIELLERN QRHYLGEELE PMSLKDLQNL EQQLETALKH IRSRKNQLMN ESLNHLQRKE KEIQEENSML TKQIKERENI LRTKQTQCEQ LNRSVDDVPQ
201: PQPFQHPHLY MIAHQTSPFL NMGGLYQEED QTAMRRNNLD LTLEPIYNYL GCYAA
Arabidopsis Description
CALTranscription factor CAULIFLOWER [Source:UniProtKB/Swiss-Prot;Acc:Q39081]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.