Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g069430.2.1 | Tomato | nucleus | 93.6 | 95.51 |
| PGSC0003DMT400063313 | Potato | nucleus | 79.6 | 80.24 |
| KRH54740 | Soybean | nucleus | 62.0 | 63.52 |
| KRH63171 | Soybean | nucleus | 62.0 | 63.52 |
| VIT_17s0000g04990.t01 | Wine grape | nucleus | 61.2 | 62.96 |
| AT5G60910.1 | Thale cress | nucleus | 60.8 | 62.81 |
| Bra029347.1-P | Field mustard | nucleus | 60.0 | 62.5 |
| CDY42841 | Canola | nucleus | 60.0 | 62.5 |
| CDY47002 | Canola | nucleus | 59.6 | 61.83 |
| CDY58690 | Canola | nucleus | 59.2 | 61.41 |
| Bra035952.1-P | Field mustard | nucleus | 58.8 | 61.0 |
| CDY02185 | Canola | nucleus | 58.8 | 61.0 |
| CDY16832 | Canola | nucleus | 58.8 | 61.0 |
| Bra012997.1-P | Field mustard | nucleus | 58.4 | 60.58 |
| TraesCS5A01G391700.1 | Wheat | nucleus | 57.2 | 58.61 |
| PGSC0003DMT400072888 | Potato | nucleus | 56.8 | 58.2 |
| PGSC0003DMT400068325 | Potato | nucleus | 53.2 | 56.84 |
| TraesCS5B01G396600.2 | Wheat | nucleus | 56.8 | 56.57 |
| Os03t0752800-02 | Rice | nucleus | 55.6 | 56.5 |
| EER90862 | Sorghum | nucleus | 55.2 | 56.33 |
| TraesCS5D01G401500.1 | Wheat | cytosol, nucleus | 57.2 | 56.3 |
| GSMUA_Achr2P13650_001 | Banana | nucleus | 54.8 | 55.69 |
| GSMUA_Achr6P00050_001 | Banana | nucleus | 53.6 | 55.37 |
| PGSC0003DMT400003485 | Potato | nucleus | 54.4 | 55.06 |
| GSMUA_Achr4P23540_001 | Banana | nucleus | 54.0 | 54.44 |
| Zm00001d018667_P003 | Maize | nucleus | 58.0 | 53.51 |
| GSMUA_Achr8P04330_001 | Banana | nucleus | 52.4 | 53.47 |
| EER95753 | Sorghum | nucleus | 57.2 | 52.96 |
| GSMUA_Achr7P00460_001 | Banana | nucleus | 52.8 | 52.8 |
| EER97510 | Sorghum | nucleus | 53.2 | 52.57 |
| Os07t0108900-02 | Rice | nucleus | 56.0 | 52.43 |
| TraesCS2D01G262700.1 | Wheat | nucleus | 56.4 | 52.03 |
| Zm00001d022088_P004 | Maize | nucleus | 53.2 | 51.55 |
| TraesCS2A01G261200.2 | Wheat | nucleus | 56.4 | 51.46 |
| TraesCS2B01G281000.1 | Wheat | nucleus | 56.4 | 51.46 |
| GSMUA_Achr3P30440_001 | Banana | nucleus | 46.0 | 50.0 |
| Os07t0605200-01 | Rice | nucleus | 49.6 | 49.8 |
| Zm00001d013259_P002 | Maize | nucleus | 55.2 | 49.46 |
| GSMUA_Achr3P02280_001 | Banana | nucleus | 51.6 | 49.05 |
| GSMUA_Achr10P... | Banana | nucleus | 55.2 | 48.42 |
| TraesCS2A01G174300.3 | Wheat | nucleus | 51.6 | 48.31 |
| TraesCS2D01G181400.3 | Wheat | nucleus | 51.2 | 47.94 |
| TraesCS2B01G200800.1 | Wheat | nucleus | 51.2 | 47.94 |
| Zm00001d007949_P001 | Maize | nucleus | 57.6 | 47.21 |
| Zm00001d034045_P003 | Maize | nucleus | 54.0 | 46.39 |
| HORVU5Hr1G095630.3 | Barley | nucleus, plastid | 56.4 | 45.93 |
| GSMUA_Achr3P25280_001 | Banana | nucleus | 48.8 | 45.86 |
| HORVU2Hr1G063800.7 | Barley | nucleus, plastid | 55.6 | 45.42 |
| PGSC0003DMT400063315 | Potato | nucleus | 43.6 | 44.31 |
| PGSC0003DMT400056363 | Potato | nucleus | 41.2 | 42.74 |
| PGSC0003DMT400072891 | Potato | nucleus | 41.2 | 42.56 |
| PGSC0003DMT400003483 | Potato | nucleus | 41.6 | 42.28 |
| PGSC0003DMT400000383 | Potato | nucleus | 42.0 | 41.18 |
| PGSC0003DMT400004875 | Potato | nucleus | 29.2 | 38.83 |
| KXG23502 | Sorghum | nucleus | 34.4 | 38.56 |
| PGSC0003DMT400039313 | Potato | nucleus | 30.8 | 38.5 |
| Os12t0501700-00 | Rice | nucleus | 35.6 | 38.2 |
| Zm00001d023736_P001 | Maize | nucleus | 36.0 | 35.02 |
| PGSC0003DMT400065614 | Potato | nucleus | 32.0 | 34.48 |
| PGSC0003DMT400073134 | Potato | nucleus | 33.6 | 33.87 |
| PGSC0003DMT400013248 | Potato | nucleus | 31.2 | 33.62 |
| PGSC0003DMT400044552 | Potato | nucleus | 32.4 | 31.89 |
| PGSC0003DMT400024193 | Potato | nucleus | 16.4 | 22.91 |
| PGSC0003DMT400005159 | Potato | nucleus | 18.8 | 22.17 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | ProteinID:AAA92839 | ProteinID:AAA92839.1 | ProteinID:AAA92840 | ProteinID:AAA92840.1 |
| ncoils:Coil | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR002487 | InterPro:IPR036879 |
| UniProt:M0ZY32 | InterPro:MADS_MEF2-like | PFAM:PF00319 | PFAM:PF01486 | EnsemblPlantsGene:PGSC0003DMG400004081 | PGSC:PGSC0003DMG400004081 |
| EnsemblPlants:PGSC0003DMT400010451 | PRINTS:PR00404 | ScanProsite:PS00350 | PFscan:PS50066 | PFscan:PS51297 | PANTHER:PTHR11945 |
| PANTHER:PTHR11945:SF155 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_Kbox | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf |
| EMBL:U23757 | EMBL:U23758 | UniParc:UPI0002960169 | : | : | : |
Description
Agamous-like MADS-box protein AGL8 homolog [Source:PGSC_GENE;Acc:PGSC0003DMG400004081]
Coordinates
chr6:-:51191112..51198207
Molecular Weight (calculated)
28938.2 Da
IEP (calculated)
9.050
GRAVY (calculated)
-0.923
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGRVQLKR IENKINRQVT FSKRRSGLLK KAHEISVLCD AEVGLIVFST KGKLFEYAND SCMERLLERY ERYSFAERQL VPTDHTSPGS WTLEHAKLKA
101: RLEVLQRNQK HYVGEDLESL NMKELQNLEH QLDSALKHIR SRKNQLMHES ISVLQKQDRA LQEQNNQLSK KVKEREKEVA QQNQWDQQNH EINSSTFVLP
201: QQLDSPHLGE AYQNTNVVDN GEVEGGNSTQ QQGAANNTVM PQWMLRHLNG
101: RLEVLQRNQK HYVGEDLESL NMKELQNLEH QLDSALKHIR SRKNQLMHES ISVLQKQDRA LQEQNNQLSK KVKEREKEVA QQNQWDQQNH EINSSTFVLP
201: QQLDSPHLGE AYQNTNVVDN GEVEGGNSTQ QQGAANNTVM PQWMLRHLNG
001: MGRGRVQLKR IENKINRQVT FSKRRSGLLK KAHEISVLCD AEVALIVFSS KGKLFEYSTD SCMERILERY DRYLYSDKQL VGRDVSQSEN WVLEHAKLKA
101: RVEVLEKNKR NFMGEDLDSL SLKELQSLEH QLDAAIKSIR SRKNQAMFES ISALQKKDKA LQDHNNSLLK KIKEREKKTG QQEGQLVQCS NSSSVLLPQY
201: CVTSSRDGFV ERVGGENGGA SSLTEPNSLL PAWMLRPTTT NE
101: RVEVLEKNKR NFMGEDLDSL SLKELQSLEH QLDAAIKSIR SRKNQAMFES ISALQKKDKA LQDHNNSLLK KIKEREKKTG QQEGQLVQCS NSSSVLLPQY
201: CVTSSRDGFV ERVGGENGGA SSLTEPNSLL PAWMLRPTTT NE
Arabidopsis Description
AGL8Agamous-like MADS-box protein AGL8 [Source:UniProtKB/Swiss-Prot;Acc:Q38876]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.