Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g028020.1.1 | Tomato | nucleus | 94.4 | 98.21 |
| KRH64836 | Soybean | nucleus | 24.14 | 93.33 |
| PGSC0003DMT400013248 | Potato | nucleus | 87.07 | 87.07 |
| KRH56460 | Soybean | nucleus | 66.81 | 69.82 |
| VIT_18s0041g01880.t01 | Wine grape | nucleus | 66.38 | 69.06 |
| Bra000696.1-P | Field mustard | nucleus | 62.93 | 63.2 |
| Bra037895.1-P | Field mustard | nucleus | 62.5 | 63.04 |
| GSMUA_Achr10P... | Banana | nucleus | 62.5 | 61.97 |
| GSMUA_Achr7P23690_001 | Banana | nucleus | 62.93 | 61.09 |
| KRH64830 | Soybean | nucleus | 40.52 | 58.39 |
| PGSC0003DMT400073134 | Potato | nucleus | 56.47 | 52.82 |
| GSMUA_Achr5P16870_001 | Banana | nucleus, plastid | 63.36 | 51.76 |
| PGSC0003DMT400044552 | Potato | nucleus | 54.31 | 49.61 |
| AT4G09960.4 | Thale cress | nucleus | 62.5 | 44.07 |
| PGSC0003DMT400039313 | Potato | nucleus | 36.21 | 42.0 |
| PGSC0003DMT400072891 | Potato | nucleus | 41.38 | 39.67 |
| CDY71878 | Canola | endoplasmic reticulum | 41.81 | 36.88 |
| PGSC0003DMT400063315 | Potato | nucleus | 38.79 | 36.59 |
| PGSC0003DMT400000383 | Potato | nucleus | 39.66 | 36.08 |
| PGSC0003DMT400056363 | Potato | nucleus | 37.07 | 35.68 |
| PGSC0003DMT400003483 | Potato | nucleus | 36.64 | 34.55 |
| PGSC0003DMT400004875 | Potato | nucleus | 27.59 | 34.04 |
| PGSC0003DMT400068325 | Potato | nucleus | 32.33 | 32.05 |
| PGSC0003DMT400010451 | Potato | nucleus | 34.48 | 32.0 |
| PGSC0003DMT400003485 | Potato | nucleus | 33.19 | 31.17 |
| PGSC0003DMT400072888 | Potato | nucleus | 32.33 | 30.74 |
| PGSC0003DMT400063313 | Potato | nucleus | 31.9 | 29.84 |
| PGSC0003DMT400024193 | Potato | nucleus | 19.4 | 25.14 |
| PGSC0003DMT400005159 | Potato | nucleus | 19.4 | 21.23 |
Protein Annotations
| EntrezGene:102605234 | MapMan:15.5.14 | Gene3D:3.40.1810.10 | ncoils:Coil | GO:GO:0000977 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 |
| InterPro:IPR002100 | InterPro:IPR002487 | InterPro:IPR036879 | UniProt:M1CEC2 | InterPro:MADS_MEF2-like | PFAM:PF00319 |
| PFAM:PF01486 | EnsemblPlantsGene:PGSC0003DMG400025525 | PGSC:PGSC0003DMG400025525 | EnsemblPlants:PGSC0003DMT400065614 | PRINTS:PR00404 | ScanProsite:PS00350 |
| PFscan:PS50066 | PFscan:PS51297 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF187 | SMART:SM00432 | SUPFAM:SSF55455 |
| InterPro:TF_Kbox | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI0002958452 | RefSeq:XP_006339358.1 | : |
Description
TAGL11 transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400025525]
Coordinates
chr11:+:16127866..16137240
Molecular Weight (calculated)
27067.4 Da
IEP (calculated)
9.627
GRAVY (calculated)
-0.833
Length
232 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGKIEIKR IENNTNRQVT FCKRRNGLLK KAYELSVLCD AEIALIVFST RGRLYEYSNN NVKATIERYK KATAETSSAY TTQELNAQFY QQESKKLRQQ
101: IQLMQNTNRH LVGEGLCSLN VRELKQLENR LERGITRIRS KKHEAILAET ENLHKREIQL EQENAFLRSK IAENERLQEL SMMPSGEQGG EEYNAFQQYL
201: ARNMLQLNMM ETAVPSYDPL SPDHKRSHLQ LQ
101: IQLMQNTNRH LVGEGLCSLN VRELKQLENR LERGITRIRS KKHEAILAET ENLHKREIQL EQENAFLRSK IAENERLQEL SMMPSGEQGG EEYNAFQQYL
201: ARNMLQLNMM ETAVPSYDPL SPDHKRSHLQ LQ
001: MGRGKIEIKR IENSTNRQVT FCKRRNGLLK KAYELSVLCD AEVALIVFST RGRLYEYANN NIRSTIERYK KACSDSTNTS TVQEINAAYY QQESAKLRQQ
101: IQTIQNSNRN LMGDSLSSLS VKELKQVENR LEKAISRIRS KKHELLLVEI ENAQKREIEL DNENIYLRTK VAEVERYQQH HHQMVSGSEI NAIEALASRN
201: YFAHSIMTAG SGSGNGGSYS DPDKKILHLG
101: IQTIQNSNRN LMGDSLSSLS VKELKQVENR LEKAISRIRS KKHELLLVEI ENAQKREIEL DNENIYLRTK VAEVERYQQH HHQMVSGSEI NAIEALASRN
201: YFAHSIMTAG SGSGNGGSYS DPDKKILHLG
Arabidopsis Description
STKK-box region and MADS-box transcription factor family protein [Source:TAIR;Acc:AT4G09960]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.