Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 4
- mitochondrion 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH64836 | Soybean | nucleus | 20.42 | 96.67 |
| GSMUA_Achr10P... | Banana | nucleus | 73.59 | 89.32 |
| GSMUA_Achr7P23690_001 | Banana | nucleus | 68.66 | 81.59 |
| KRH56460 | Soybean | nucleus | 58.1 | 74.32 |
| VIT_18s0041g01880.t01 | Wine grape | nucleus | 57.04 | 72.65 |
| Bra037895.1-P | Field mustard | nucleus | 53.87 | 66.52 |
| GSMUA_Achr10P... | Banana | nucleus | 53.52 | 66.38 |
| CDX71922 | Canola | nucleus | 30.99 | 65.19 |
| Solyc11g028020.1.1 | Tomato | nucleus | 51.06 | 65.02 |
| Bra000696.1-P | Field mustard | nucleus | 52.11 | 64.07 |
| CDX90741 | Canola | nucleus | 52.11 | 64.07 |
| PGSC0003DMT400065614 | Potato | nucleus | 51.76 | 63.36 |
| PGSC0003DMT400013248 | Potato | nucleus | 51.76 | 63.36 |
| KRH64830 | Soybean | nucleus | 35.56 | 62.73 |
| GSMUA_Achr5P06590_001 | Banana | nucleus | 38.38 | 62.29 |
| GSMUA_Achr6P14760_001 | Banana | nucleus | 53.52 | 59.84 |
| GSMUA_Achr10P... | Banana | nucleus | 21.83 | 52.54 |
| AT4G09960.4 | Thale cress | nucleus | 57.39 | 49.54 |
| CDY60297 | Canola | nucleus | 50.7 | 49.32 |
| GSMUA_Achr10P... | Banana | nucleus | 54.58 | 48.59 |
| Solyc06g064840.2.1 | Tomato | nucleus | 34.15 | 48.26 |
| CDY71878 | Canola | endoplasmic reticulum | 37.68 | 40.68 |
| GSMUA_Achr2P10250_001 | Banana | nucleus | 34.15 | 40.08 |
| GSMUA_Achr2P04350_001 | Banana | nucleus | 33.8 | 40.0 |
| GSMUA_Achr4P30120_001 | Banana | nucleus | 32.75 | 39.57 |
| GSMUA_Achr3P07310_001 | Banana | nucleus | 33.8 | 39.34 |
| GSMUA_Achr1P00750_001 | Banana | nucleus | 33.45 | 39.26 |
| GSMUA_Achr11P... | Banana | nucleus | 32.39 | 39.15 |
| GSMUA_Achr1P24060_001 | Banana | nucleus | 32.75 | 38.11 |
| GSMUA_Achr9P15540_001 | Banana | nucleus | 32.75 | 37.96 |
| GSMUA_Achr4P14460_001 | Banana | nucleus | 32.04 | 37.92 |
| GSMUA_Achr9P01370_001 | Banana | nucleus | 32.39 | 37.86 |
| GSMUA_Achr3P20280_001 | Banana | nucleus | 31.34 | 37.71 |
| GSMUA_Achr3P15930_001 | Banana | nucleus | 31.34 | 37.08 |
| GSMUA_Achr7P12610_001 | Banana | nucleus | 30.63 | 37.02 |
| GSMUA_Achr2P06250_001 | Banana | nucleus | 29.23 | 36.73 |
| GSMUA_Achr8P28100_001 | Banana | nucleus | 30.99 | 36.67 |
| GSMUA_Achr2P13650_001 | Banana | nucleus | 31.69 | 36.59 |
| GSMUA_Achr6P00050_001 | Banana | nucleus | 30.99 | 36.36 |
| GSMUA_Achr7P26700_001 | Banana | nucleus | 29.93 | 35.71 |
| GSMUA_Achr8P04330_001 | Banana | nucleus | 30.63 | 35.51 |
| GSMUA_Achr4P23540_001 | Banana | nucleus | 30.99 | 35.48 |
| GSMUA_Achr5P24560_001 | Banana | nucleus | 28.87 | 34.75 |
| GSMUA_Achr7P00460_001 | Banana | nucleus | 30.28 | 34.4 |
| GSMUA_Achr3P30440_001 | Banana | nucleus | 27.82 | 34.35 |
| GSMUA_Achr3P02280_001 | Banana | nucleus | 30.99 | 33.46 |
| GSMUA_Achr10P... | Banana | nucleus | 32.75 | 32.63 |
| GSMUA_Achr3P25280_001 | Banana | nucleus | 28.17 | 30.08 |
| GSMUA_Achr6P06040_001 | Banana | nucleus | 18.66 | 22.46 |
| GSMUA_Achr9P29310_001 | Banana | nucleus | 12.68 | 21.95 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | ncoils:Coil | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | EnsemblPlantsGene:GSMUA_Achr5G16870_001 |
| EnsemblPlants:GSMUA_Achr5P16870_001 | EnsemblPlants:GSMUA_Achr5T16870_001 | InterPro:IPR002100 | InterPro:IPR002487 | InterPro:IPR036879 | UniProt:M0SZ66 |
| InterPro:MADS_MEF2-like | PFAM:PF00319 | PFAM:PF01486 | PRINTS:PR00404 | ScanProsite:PS00350 | PFscan:PS50066 |
| PFscan:PS51297 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF187 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_Kbox |
| InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI00029579CD | SEG:seg | : | : |
Description
MADS-box transcription factor 3 [Source:GMGC_GENE;Acc:GSMUA_Achr5G16870_001]
Coordinates
chr5:-:15526874..15540229
Molecular Weight (calculated)
32579.8 Da
IEP (calculated)
10.221
GRAVY (calculated)
-0.691
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MQRLLCLFSS PPPSLGGIRR LRARRSPSRR RSFFRGERSS ASVQRTSTKM GRGKIEIKRI ENTTNRQVTF CKRRNGLLKK AYELSVLCDA EVALIVFSSR
101: GRLYEYANNN IKSTIERYKK ACADSSSSGA IVDVNSQHYY QQESAKLRHQ IQILQNANRH LMGDALSSLN VKELKQLENR LERSITRIRS KKHELLFAEI
201: EYMQKREVEL QSDNMYLRAK IAENERVQQL SIVEAGAEYD AIPGAFDSRN YYHANMLEAA AHYSHHQDQT ALQLGYETKA DSAA
101: GRLYEYANNN IKSTIERYKK ACADSSSSGA IVDVNSQHYY QQESAKLRHQ IQILQNANRH LMGDALSSLN VKELKQLENR LERSITRIRS KKHELLFAEI
201: EYMQKREVEL QSDNMYLRAK IAENERVQQL SIVEAGAEYD AIPGAFDSRN YYHANMLEAA AHYSHHQDQT ALQLGYETKA DSAA
001: TAYQSELGGD SSPLRKSGRG KIEIKRIENT TNRQVTFCKR RNGLLKKAYE LSVLCDAEVA LIVFSSRGRL YEYSNNSVKG TIERYKKAIS DNSNTGSVAE
101: INAQYYQQES AKLRQQIISI QNSNRQLMGE TIGSMSPKEL RNLEGRLERS ITRIRSKKNE LLFSEIDYMQ KREVDLHNDN QILRAKIAEN ERNNPSISLM
201: PGGSNYEQLM PPPQTQSQPF DSRNYFQVAA LQPNNHHYSS AGRQDQTALQ LV
101: INAQYYQQES AKLRQQIISI QNSNRQLMGE TIGSMSPKEL RNLEGRLERS ITRIRSKKNE LLFSEIDYMQ KREVDLHNDN QILRAKIAEN ERNNPSISLM
201: PGGSNYEQLM PPPQTQSQPF DSRNYFQVAA LQPNNHHYSS AGRQDQTALQ LV
Arabidopsis Description
AGK-box region and MADS-box transcription factor family protein [Source:TAIR;Acc:AT4G18960]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.