Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH64836 | Soybean | nucleus | 26.01 | 96.67 |
| KRH56460 | Soybean | nucleus | 84.3 | 84.68 |
| KRH64830 | Soybean | nucleus | 56.05 | 77.64 |
| Bra037895.1-P | Field mustard | nucleus | 77.58 | 75.22 |
| Bra000696.1-P | Field mustard | nucleus | 76.68 | 74.03 |
| Solyc11g028020.1.1 | Tomato | nucleus | 68.61 | 68.61 |
| GSMUA_Achr10P... | Banana | nucleus | 71.75 | 68.38 |
| PGSC0003DMT400013248 | Potato | nucleus | 70.4 | 67.67 |
| PGSC0003DMT400065614 | Potato | nucleus | 69.06 | 66.38 |
| GSMUA_Achr7P23690_001 | Banana | nucleus | 70.85 | 66.11 |
| VIT_10s0003g02070.t01 | Wine grape | nucleus | 66.82 | 65.93 |
| VIT_14s0068g01800.t01 | Wine grape | nucleus | 17.94 | 62.5 |
| GSMUA_Achr5P16870_001 | Banana | nucleus, plastid | 72.65 | 57.04 |
| AT4G09960.4 | Thale cress | nucleus | 77.58 | 52.58 |
| Solyc06g064840.2.1 | Tomato | nucleus | 47.09 | 52.24 |
| VIT_12s0142g00360.t01 | Wine grape | nucleus | 63.68 | 51.82 |
| CDY71878 | Canola | endoplasmic reticulum | 56.5 | 47.91 |
| VIT_00s0211g00180.t01 | Wine grape | nucleus | 40.81 | 40.62 |
| VIT_17s0000g05000.t01 | Wine grape | nucleus | 43.05 | 39.02 |
| VIT_18s0001g07900.t01 | Wine grape | nucleus | 41.26 | 38.33 |
| VIT_01s0010g03900.t01 | Wine grape | nucleus | 37.67 | 38.01 |
| VIT_15s0048g01270.t01 | Wine grape | nucleus | 41.26 | 37.7 |
| VIT_14s0083g01050.t01 | Wine grape | nucleus | 40.81 | 37.45 |
| VIT_01s0011g00110.t01 | Wine grape | nucleus | 39.91 | 36.63 |
| VIT_01s0011g00100.t01 | Wine grape | nucleus | 39.01 | 36.1 |
| VIT_17s0000g04990.t01 | Wine grape | nucleus | 38.56 | 35.39 |
| VIT_16s0022g02330.t01 | Wine grape | nucleus | 38.56 | 34.54 |
| VIT_17s0000g01230.t01 | Wine grape | nucleus | 36.32 | 34.47 |
| VIT_14s0083g01030.t01 | Wine grape | nucleus | 35.87 | 32.39 |
Protein Annotations
| EntrezGene:100232870 | wikigene:100232870 | MapMan:15.5.14 | Gene3D:3.40.1810.10 | ProteinID:AAM21345 | ProteinID:AAM21345.1 |
| EMBL:AF373604 | ProteinID:AKJ79177.1 | ProteinID:AKJ79178.1 | ProteinID:AKJ79179.1 | ProteinID:CCB61637 | ProteinID:CCB61637.1 |
| ncoils:Coil | UniProt:F6I457 | EMBL:FN596744 | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 |
| InterPro:IPR002487 | InterPro:IPR036879 | EntrezGene:MADS5 | wikigene:MADS5 | InterPro:MADS_MEF2-like | PFAM:PF00319 |
| PFAM:PF01486 | PRINTS:PR00404 | ScanProsite:PS00350 | PFscan:PS50066 | PFscan:PS51297 | PANTHER:PTHR11945 |
| PANTHER:PTHR11945:SF187 | SMART:SM00432 | SUPFAM:SSF55455 | TIGR:TC52091 | InterPro:TF_Kbox | InterPro:TF_MADSbox |
| InterPro:TF_MADSbox_sf | UniParc:UPI0001985514 | ArrayExpress:VIT_18s0041g01880 | EnsemblPlantsGene:VIT_18s0041g01880 | EnsemblPlants:VIT_18s0041g01880.t01 | unigene:Vvi.5818 |
| RefSeq:XP_010665297.1 | : | : | : | : | : |
Description
Agamous like-protein 11 [Source:UniProtKB/TrEMBL;Acc:F6I457]
Coordinates
chr18:-:26888672..26896521
Molecular Weight (calculated)
25674.9 Da
IEP (calculated)
9.973
GRAVY (calculated)
-0.639
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGKIEIKR IENTTNRQVT FCKRRNGLLK KAYELSVLCD AEVALIVFSS RGRVYEYSNN NIKSTIDRYK KASSDSTNGG STMEINAQYY QQESAKLRQQ
101: IQMLQNSNRH LMGDSLASLT VKELKQLENR LERGITRIRS KKHELLLAEI EYLQKREIEL ENESVYLRTK IAEVERLQQA NMVSTHEFNA IQALVSRNFF
201: QPNMIEGGST GYPLPDKKVL HLG
101: IQMLQNSNRH LMGDSLASLT VKELKQLENR LERGITRIRS KKHELLLAEI EYLQKREIEL ENESVYLRTK IAEVERLQQA NMVSTHEFNA IQALVSRNFF
201: QPNMIEGGST GYPLPDKKVL HLG
001: MGRGKIEIKR IENSTNRQVT FCKRRNGLLK KAYELSVLCD AEVALIVFST RGRLYEYANN NIRSTIERYK KACSDSTNTS TVQEINAAYY QQESAKLRQQ
101: IQTIQNSNRN LMGDSLSSLS VKELKQVENR LEKAISRIRS KKHELLLVEI ENAQKREIEL DNENIYLRTK VAEVERYQQH HHQMVSGSEI NAIEALASRN
201: YFAHSIMTAG SGSGNGGSYS DPDKKILHLG
101: IQTIQNSNRN LMGDSLSSLS VKELKQVENR LEKAISRIRS KKHELLLVEI ENAQKREIEL DNENIYLRTK VAEVERYQQH HHQMVSGSEI NAIEALASRN
201: YFAHSIMTAG SGSGNGGSYS DPDKKILHLG
Arabidopsis Description
STKK-box region and MADS-box transcription factor family protein [Source:TAIR;Acc:AT4G09960]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.