Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- mitochondrion 1
- endoplasmic reticulum 3
- extracellular 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY65346 | Canola | cytosol | 9.51 | 100.0 |
| CDY65347 | Canola | nucleus | 43.35 | 72.15 |
| CDX90741 | Canola | nucleus | 63.12 | 71.86 |
| KRH64830 | Soybean | nucleus | 41.06 | 67.08 |
| VIT_18s0041g01880.t01 | Wine grape | nucleus | 47.91 | 56.5 |
| CDY60297 | Canola | nucleus | 61.98 | 55.82 |
| KRH56460 | Soybean | nucleus | 46.01 | 54.5 |
| Solyc06g064840.2.1 | Tomato | nucleus | 35.36 | 46.27 |
| GSMUA_Achr10P... | Banana | nucleus | 39.92 | 44.87 |
| PGSC0003DMT400013248 | Potato | nucleus | 38.78 | 43.97 |
| GSMUA_Achr7P23690_001 | Banana | nucleus | 39.92 | 43.93 |
| CDY13236 | Canola | mitochondrion | 33.46 | 43.78 |
| Solyc11g028020.1.1 | Tomato | nucleus | 36.5 | 43.05 |
| PGSC0003DMT400065614 | Potato | nucleus | 36.88 | 41.81 |
| CDX98597 | Canola | nucleus | 37.64 | 39.44 |
| CDY09267 | Canola | nucleus | 37.26 | 39.36 |
| CDX78909 | Canola | nucleus | 37.64 | 39.29 |
| CDY01574 | Canola | nucleus | 18.25 | 39.02 |
| CDX79857 | Canola | nucleus | 35.36 | 38.11 |
| GSMUA_Achr5P16870_001 | Banana | nucleus, plastid | 40.68 | 37.68 |
| CDX98330 | Canola | nucleus | 33.84 | 35.89 |
| CDY49254 | Canola | nucleus | 34.22 | 32.73 |
| CDX71922 | Canola | nucleus | 16.73 | 32.59 |
| CDX99406 | Canola | nucleus | 38.02 | 32.05 |
| CDX89005 | Canola | nucleus | 32.32 | 30.8 |
| CDY00589 | Canola | nucleus | 31.18 | 29.82 |
| CDX67765 | Canola | nucleus | 36.5 | 27.59 |
| CDY48451 | Canola | nucleus | 15.21 | 26.14 |
| CDX69345 | Canola | nucleus | 19.77 | 22.91 |
| CDY11824 | Canola | nucleus | 21.29 | 22.86 |
| CDY66153 | Canola | nucleus | 21.29 | 22.86 |
| CDY25613 | Canola | nucleus | 19.77 | 22.81 |
| CDY58690 | Canola | nucleus | 20.53 | 22.41 |
| CDX90394 | Canola | nucleus | 19.39 | 22.27 |
| CDX89496 | Canola | nucleus | 19.39 | 22.27 |
| CDY02185 | Canola | nucleus | 20.15 | 21.99 |
| CDX75686 | Canola | nucleus | 19.01 | 21.83 |
| CDY42841 | Canola | nucleus | 19.77 | 21.67 |
| CDY47002 | Canola | nucleus | 19.77 | 21.58 |
| CDY15724 | Canola | nucleus | 20.53 | 21.43 |
| CDY26462 | Canola | nucleus | 20.53 | 21.26 |
| CDX72465 | Canola | nucleus | 19.39 | 21.25 |
| CDY16832 | Canola | nucleus | 19.39 | 21.16 |
| CDY27603 | Canola | nucleus | 20.15 | 20.95 |
| CDX78653 | Canola | nucleus | 20.53 | 20.85 |
| CDX69036 | Canola | nucleus | 19.01 | 20.83 |
| CDY49287 | Canola | nucleus | 19.01 | 20.83 |
| CDX75412 | Canola | nucleus | 19.01 | 20.83 |
| CDY43239 | Canola | nucleus | 19.77 | 20.8 |
| CDX84935 | Canola | nucleus | 19.77 | 20.72 |
| CDY34718 | Canola | nucleus | 19.77 | 20.63 |
| CDX70651 | Canola | nucleus | 20.15 | 20.46 |
| CDX69499 | Canola | nucleus | 20.53 | 20.45 |
| CDY57524 | Canola | nucleus | 19.39 | 20.4 |
| CDY03905 | Canola | nucleus | 20.91 | 20.37 |
| CDX89097 | Canola | nucleus | 19.01 | 20.33 |
| CDY18911 | Canola | nucleus | 18.25 | 20.25 |
| CDX74754 | Canola | nucleus | 19.39 | 19.92 |
| CDY36077 | Canola | nucleus | 16.73 | 19.91 |
| CDX85287 | Canola | nucleus | 14.07 | 19.79 |
| CDY04164 | Canola | nucleus | 19.39 | 19.77 |
| CDY34564 | Canola | nucleus | 16.35 | 19.72 |
| CDY18912 | Canola | nucleus | 17.87 | 19.5 |
| CDY02978 | Canola | nucleus | 18.63 | 19.14 |
| CDX79856 | Canola | nucleus | 6.46 | 19.1 |
| CDY51202 | Canola | nucleus | 18.63 | 19.07 |
| CDY53885 | Canola | nucleus | 18.63 | 19.07 |
| CDX86353 | Canola | nucleus | 17.49 | 18.47 |
| KRH64836 | Soybean | nucleus | 4.18 | 18.33 |
| CDY65811 | Canola | nucleus | 17.49 | 17.97 |
| CDY35780 | Canola | nucleus | 13.31 | 17.77 |
| CDY00082 | Canola | nucleus | 16.73 | 17.74 |
| CDY45899 | Canola | nucleus | 16.73 | 17.67 |
| CDY45709 | Canola | nucleus | 11.41 | 17.34 |
| CDY33554 | Canola | nucleus | 16.73 | 17.19 |
| CDX95960 | Canola | nucleus | 16.73 | 17.19 |
| CDY49686 | Canola | nucleus | 11.03 | 16.76 |
| CDY04265 | Canola | nucleus | 17.49 | 16.61 |
| CDY33113 | Canola | nucleus | 19.01 | 16.18 |
| CDY72391 | Canola | nucleus | 4.56 | 16.0 |
| CDY07357 | Canola | nucleus | 17.49 | 15.92 |
| CDY60686 | Canola | cytosol, nucleus, plastid | 3.8 | 14.93 |
| CDY19977 | Canola | nucleus | 5.7 | 14.71 |
| CDX71166 | Canola | nucleus | 18.25 | 13.79 |
| CDY42485 | Canola | nucleus | 19.77 | 13.76 |
Protein Annotations
| MapMan:35.1 | GO:A0A078JW70 | UniProt:A0A078JW70 | EnsemblPlants:CDY71878 | ProteinID:CDY71878 | ProteinID:CDY71878.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00020991001 | InterPro:IPR002487 | PFAM:PF01486 | PFscan:PS51297 | PANTHER:PTHR11945 |
| PANTHER:PTHR11945:SF150 | InterPro:TF_Kbox | UniParc:UPI0004EEA6F4 | : | : | : |
Description
BnaAnng39120DBnaAnng39120D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JW70]
Coordinates
chrLK047923:+:3..1810
Molecular Weight (calculated)
30160.0 Da
IEP (calculated)
9.469
GRAVY (calculated)
-0.311
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: FKYQTQASYP AATVLVNKSF FFSLICQSFF LELKKNCVAR RCVVVRTLLS SFILSKSDHA FSFLFWLSHL ISSISFLKIY NVPSELDGFF FRDSIRSTIE
101: RYKKASDNTN THSVQEINAA YYQQESAKLR QQIQTIQNSN RHLMGDSLSA LSVKELKQVE NRLEKAISRI RSKKHELLLA EIENLQKREI ELDNESIYLR
201: TKIAEVERFQ HHHHHMVSGT EMTAIEVLAS RNYFAHSIMT TGSGSGAGHG CSYSDPDKKI HLG
101: RYKKASDNTN THSVQEINAA YYQQESAKLR QQIQTIQNSN RHLMGDSLSA LSVKELKQVE NRLEKAISRI RSKKHELLLA EIENLQKREI ELDNESIYLR
201: TKIAEVERFQ HHHHHMVSGT EMTAIEVLAS RNYFAHSIMT TGSGSGAGHG CSYSDPDKKI HLG
001: MMGRGKIEIK RIENSTNRQV TFCKRRNGLL KKAYELSVLC DAEVALIVFS TRGRLYEYAN NNIRSTIERY KKACSDSTNT STVQEINAAY YQQESAKLRQ
101: QIQTIQNSNR NLMGDSLSSL SVKELKQVEN RLEKAISRIR SKKHELLLVE IENAQKREIE LDNENIYLRT KVAEVERYQQ HHHQMVSGSE INAIEALASR
201: NYFAHSIMTA GSGSGNGGSY SDPDKKILHL G
101: QIQTIQNSNR NLMGDSLSSL SVKELKQVEN RLEKAISRIR SKKHELLLVE IENAQKREIE LDNENIYLRT KVAEVERYQQ HHHQMVSGSE INAIEALASR
201: NYFAHSIMTA GSGSGNGGSY SDPDKKILHL G
Arabidopsis Description
STKK-box region and MADS-box transcription factor family protein [Source:TAIR;Acc:AT4G09960]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.