Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040719.1-P | Field mustard | nucleus | 46.26 | 94.71 |
| CDY48451 | Canola | nucleus | 40.8 | 92.81 |
| AT2G14210.2 | Thale cress | nucleus | 57.47 | 85.11 |
| KRH42051 | Soybean | nucleus | 36.78 | 57.92 |
| KRH10635 | Soybean | nucleus | 41.38 | 57.83 |
| CDX69345 | Canola | nucleus | 36.78 | 56.39 |
| CDY25613 | Canola | nucleus | 36.78 | 56.14 |
| CDX75686 | Canola | nucleus | 36.78 | 55.9 |
| CDX90394 | Canola | nucleus | 36.78 | 55.9 |
| CDX89496 | Canola | nucleus | 36.49 | 55.46 |
| CDY72391 | Canola | nucleus | 11.49 | 53.33 |
| CDX75412 | Canola | nucleus | 36.78 | 53.33 |
| CDX72465 | Canola | nucleus | 36.49 | 52.92 |
| CDY60686 | Canola | cytosol, nucleus, plastid | 10.06 | 52.24 |
| CDX69036 | Canola | nucleus | 35.92 | 52.08 |
| CDY49287 | Canola | nucleus | 35.63 | 51.67 |
| KRH21716 | Soybean | nucleus | 25.86 | 47.12 |
| CDX79856 | Canola | nucleus | 11.78 | 46.07 |
| CDX71922 | Canola | nucleus | 16.67 | 42.96 |
| CDY19977 | Canola | nucleus | 12.07 | 41.18 |
| CDX90741 | Canola | nucleus | 22.13 | 33.33 |
| CDY36077 | Canola | nucleus | 20.69 | 32.58 |
| CDY26462 | Canola | nucleus | 23.56 | 32.28 |
| CDY09267 | Canola | nucleus | 22.99 | 32.13 |
| CDY34564 | Canola | nucleus | 20.11 | 32.11 |
| CDX98597 | Canola | nucleus | 22.99 | 31.87 |
| CDY34718 | Canola | nucleus | 22.99 | 31.75 |
| CDX78909 | Canola | nucleus | 22.99 | 31.75 |
| CDY57524 | Canola | nucleus | 22.7 | 31.6 |
| CDY43239 | Canola | nucleus | 22.7 | 31.6 |
| CDY66153 | Canola | nucleus | 22.13 | 31.43 |
| CDY11824 | Canola | nucleus | 22.13 | 31.43 |
| CDX79857 | Canola | nucleus | 21.84 | 31.15 |
| CDY47002 | Canola | nucleus | 21.55 | 31.12 |
| CDY58690 | Canola | nucleus | 21.55 | 31.12 |
| CDX84935 | Canola | nucleus | 22.41 | 31.08 |
| CDY15724 | Canola | nucleus | 22.41 | 30.95 |
| CDY27603 | Canola | nucleus | 22.41 | 30.83 |
| CDY18911 | Canola | nucleus | 20.98 | 30.8 |
| CDX69499 | Canola | nucleus | 23.28 | 30.68 |
| CDX98330 | Canola | nucleus | 21.84 | 30.65 |
| CDX78653 | Canola | nucleus | 22.7 | 30.5 |
| CDY16832 | Canola | nucleus | 20.98 | 30.29 |
| CDY02185 | Canola | nucleus | 20.98 | 30.29 |
| CDX70651 | Canola | nucleus | 22.41 | 30.12 |
| CDX89097 | Canola | nucleus | 21.26 | 30.08 |
| CDY42841 | Canola | nucleus | 20.69 | 30.0 |
| CDY18912 | Canola | nucleus | 20.69 | 29.88 |
| CDY65811 | Canola | nucleus | 21.84 | 29.69 |
| CDY33554 | Canola | nucleus | 21.55 | 29.3 |
| CDX95960 | Canola | nucleus | 21.55 | 29.3 |
| CDY04164 | Canola | nucleus | 21.55 | 29.07 |
| CDX74754 | Canola | nucleus | 21.26 | 28.91 |
| CDY02978 | Canola | nucleus | 21.26 | 28.91 |
| CDY03905 | Canola | nucleus | 22.41 | 28.89 |
| CDY51202 | Canola | nucleus | 21.26 | 28.79 |
| CDY49254 | Canola | nucleus | 22.41 | 28.36 |
| CDX86353 | Canola | nucleus | 20.11 | 28.11 |
| CDY00082 | Canola | nucleus | 19.83 | 27.82 |
| CDY04265 | Canola | nucleus | 21.84 | 27.44 |
| CDY45899 | Canola | nucleus | 19.25 | 26.91 |
| CDY65347 | Canola | nucleus | 12.07 | 26.58 |
| CDY00589 | Canola | nucleus | 20.98 | 26.55 |
| CDY53885 | Canola | nucleus | 19.54 | 26.46 |
| CDX89005 | Canola | nucleus | 20.98 | 26.45 |
| CDY07357 | Canola | nucleus | 21.84 | 26.3 |
| CDX99406 | Canola | nucleus | 22.99 | 25.64 |
| CDY60297 | Canola | nucleus | 20.69 | 24.66 |
| CDY33113 | Canola | nucleus | 21.55 | 24.27 |
| CDY13236 | Canola | mitochondrion | 12.93 | 22.39 |
| CDX67765 | Canola | nucleus | 22.13 | 22.13 |
| CDY45709 | Canola | nucleus | 9.77 | 19.65 |
| CDY49686 | Canola | nucleus | 9.48 | 19.08 |
| CDY42485 | Canola | nucleus | 20.69 | 19.05 |
| CDX85287 | Canola | nucleus | 10.06 | 18.72 |
| CDY71878 | Canola | endoplasmic reticulum | 13.79 | 18.25 |
| CDY01574 | Canola | nucleus | 6.32 | 17.89 |
| CDY35780 | Canola | nucleus | 8.91 | 15.74 |
| KRH66116 | Soybean | nucleus, plastid | 2.59 | 11.39 |
| CDY65346 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | GO:A0A078C2A2 | EnsemblPlants:CDX71166 | ProteinID:CDX71166 | ProteinID:CDX71166.1 |
| ncoils:Coil | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0045944 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00144676001 | InterPro:IPR002100 | InterPro:IPR002487 | InterPro:IPR036879 |
| InterPro:MADS_MEF2-like | PFAM:PF00319 | PFAM:PF01486 | PRINTS:PR00404 | ScanProsite:PS00350 | PFscan:PS50066 |
| PFscan:PS51297 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF263 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_Kbox |
| InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI0004EDFC6F | SEG:seg | : | : |
Description
BnaC07g04450D
Coordinates
chrLK031792:+:320086..330666
Molecular Weight (calculated)
39551.9 Da
IEP (calculated)
9.545
GRAVY (calculated)
-0.593
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGKIVIRR IDDSTSRQVT FSKRRSGLLK KAKELSILCD AEVGVIIFSS TGKLYDFASN SSMKSIIGRY NKVKEEQHQL LNHASEIKFW QREVATLQQQ
101: LRYLQQCHRK LIGEELSGMN ANDLQNLEDQ LEKSLKGVRL KKPSTFSLEQ NHKLLNDDGD IMDGPHRPGQ GILLQANTEL LLSASVIQIG KHVQTSSALF
201: MYIDILNCMN TCLMQNQSSH LPQMQKFHSA GKAEFDLLLE KPQKGTIGRV NKITCCQDED QLLMDQIREL NLKGQIIQKE NQELHSRVDI MRKENIKLQK
301: KCQVHGNPNA IEGNSSVDRA TNRNETYAPP QLQLIQLQPP REKSIKLG
101: LRYLQQCHRK LIGEELSGMN ANDLQNLEDQ LEKSLKGVRL KKPSTFSLEQ NHKLLNDDGD IMDGPHRPGQ GILLQANTEL LLSASVIQIG KHVQTSSALF
201: MYIDILNCMN TCLMQNQSSH LPQMQKFHSA GKAEFDLLLE KPQKGTIGRV NKITCCQDED QLLMDQIREL NLKGQIIQKE NQELHSRVDI MRKENIKLQK
301: KCQVHGNPNA IEGNSSVDRA TNRNETYAPP QLQLIQLQPP REKSIKLG
001: MGRGKIVIRR IDNSTSRQVT FSKRRSGLLK KAKELSILCD AEVGVIIFSS TGKLYDYASN SSMKTIIERY NRVKEEQHQL LNHASEIKFW QREVASLQQQ
101: LQYLQECHRK LVGEELSGMN ANDLQNLEDQ LVTSLKGVRL KKDQLMTNEI RELNRKGQII QKENHELQNI VDIMRKENIK LQKKVHGRTN AIEGNSSVDP
201: ISNGTTTYAP PQLQLIQLQP APREKSIRLG LQLS
101: LQYLQECHRK LVGEELSGMN ANDLQNLEDQ LVTSLKGVRL KKDQLMTNEI RELNRKGQII QKENHELQNI VDIMRKENIK LQKKVHGRTN AIEGNSSVDP
201: ISNGTTTYAP PQLQLIQLQP APREKSIRLG LQLS
Arabidopsis Description
ANR1AGAMOUS-like 44 [Source:TAIR;Acc:AT2G14210]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.