Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90741 | Canola | nucleus | 68.99 | 47.19 |
| CDY71878 | Canola | endoplasmic reticulum | 72.15 | 43.35 |
| CDY13236 | Canola | mitochondrion | 46.2 | 36.32 |
| CDY60297 | Canola | nucleus | 63.29 | 34.25 |
| CDX79857 | Canola | nucleus | 48.73 | 31.56 |
| CDX98597 | Canola | nucleus | 48.1 | 30.28 |
| CDY09267 | Canola | nucleus | 47.47 | 30.12 |
| CDX78909 | Canola | nucleus | 47.47 | 29.76 |
| CDX98330 | Canola | nucleus | 45.57 | 29.03 |
| CDY01574 | Canola | nucleus | 22.15 | 28.46 |
| CDY49254 | Canola | nucleus | 46.2 | 26.55 |
| CDX71922 | Canola | nucleus | 22.15 | 25.93 |
| CDX89005 | Canola | nucleus | 44.3 | 25.36 |
| CDY00589 | Canola | nucleus | 42.41 | 24.36 |
| CDX99406 | Canola | nucleus | 47.47 | 24.04 |
| CDY48451 | Canola | nucleus | 21.52 | 22.22 |
| CDX67765 | Canola | nucleus | 46.2 | 20.98 |
| CDY25613 | Canola | nucleus | 29.75 | 20.61 |
| CDX89496 | Canola | nucleus | 29.75 | 20.52 |
| Solyc03g019710.2.1 | Tomato | nucleus | 22.78 | 20.34 |
| CDX69345 | Canola | nucleus | 29.11 | 20.26 |
| CDX75686 | Canola | nucleus | 29.11 | 20.09 |
| PGSC0003DMT400039313 | Potato | nucleus | 25.32 | 20.0 |
| CDX90394 | Canola | nucleus | 28.48 | 19.65 |
| CDX85287 | Canola | nucleus | 22.78 | 19.25 |
| CDX72465 | Canola | nucleus | 29.11 | 19.17 |
| CDY49287 | Canola | nucleus | 28.48 | 18.75 |
| CDX69036 | Canola | nucleus | 28.48 | 18.75 |
| CDX75412 | Canola | nucleus | 28.48 | 18.75 |
| CDY66153 | Canola | nucleus | 27.22 | 17.55 |
| CDY11824 | Canola | nucleus | 27.22 | 17.55 |
| CDY02185 | Canola | nucleus | 26.58 | 17.43 |
| CDY58690 | Canola | nucleus | 26.58 | 17.43 |
| CDY16832 | Canola | nucleus | 26.58 | 17.43 |
| CDX86353 | Canola | nucleus | 27.22 | 17.27 |
| CDY42841 | Canola | nucleus | 25.95 | 17.08 |
| CDY15724 | Canola | nucleus | 27.22 | 17.06 |
| VIT_17s0000g01230.t01 | Wine grape | nucleus | 25.32 | 17.02 |
| CDY47002 | Canola | nucleus | 25.95 | 17.01 |
| CDY18911 | Canola | nucleus | 25.32 | 16.88 |
| CDX74754 | Canola | nucleus | 27.22 | 16.8 |
| CDY35780 | Canola | nucleus | 20.89 | 16.75 |
| CDY36077 | Canola | nucleus | 23.42 | 16.74 |
| CDY34564 | Canola | nucleus | 22.78 | 16.51 |
| CDY53885 | Canola | nucleus | 26.58 | 16.34 |
| CDX84935 | Canola | nucleus | 25.95 | 16.33 |
| CDY27603 | Canola | nucleus | 25.95 | 16.21 |
| CDY18912 | Canola | nucleus | 24.68 | 16.18 |
| CDY00082 | Canola | nucleus | 25.32 | 16.13 |
| CDY45899 | Canola | nucleus | 25.32 | 16.06 |
| CDY43239 | Canola | nucleus | 25.32 | 16.0 |
| CDY03905 | Canola | nucleus | 27.22 | 15.93 |
| CDY34718 | Canola | nucleus | 24.68 | 15.48 |
| CDX89097 | Canola | nucleus | 24.05 | 15.45 |
| CDY26462 | Canola | nucleus | 24.68 | 15.35 |
| CDY57524 | Canola | nucleus | 24.05 | 15.2 |
| CDY04164 | Canola | nucleus | 24.68 | 15.12 |
| CDX78653 | Canola | nucleus | 24.68 | 15.06 |
| CDY65811 | Canola | nucleus | 24.05 | 14.84 |
| CDX69499 | Canola | nucleus | 24.68 | 14.77 |
| CDX70651 | Canola | nucleus | 24.05 | 14.67 |
| CDX95960 | Canola | nucleus | 23.42 | 14.45 |
| CDY33554 | Canola | nucleus | 23.42 | 14.45 |
| CDY02978 | Canola | nucleus | 22.78 | 14.06 |
| CDY51202 | Canola | nucleus | 22.78 | 14.01 |
| CDY04265 | Canola | nucleus | 24.05 | 13.72 |
| CDY49686 | Canola | nucleus | 14.56 | 13.29 |
| CDY45709 | Canola | nucleus | 14.56 | 13.29 |
| CDY07357 | Canola | nucleus | 24.05 | 13.15 |
| CDY19977 | Canola | nucleus | 8.23 | 12.75 |
| CDY33113 | Canola | nucleus | 24.05 | 12.3 |
| CDX71166 | Canola | nucleus | 26.58 | 12.07 |
| CDY42485 | Canola | nucleus | 24.05 | 10.05 |
| CDY60686 | Canola | cytosol, nucleus, plastid | 3.8 | 8.96 |
| CDX79856 | Canola | nucleus | 4.43 | 7.87 |
| CDY72391 | Canola | nucleus | 2.53 | 5.33 |
| CDY65346 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:35.1 | GO:A0A078JJ18 | UniProt:A0A078JJ18 | EnsemblPlants:CDY65347 | ProteinID:CDY65347 | ProteinID:CDY65347.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00045663001 | InterPro:IPR002487 | PFAM:PF01486 | PFscan:PS51297 | PANTHER:PTHR11945 |
| PANTHER:PTHR11945:SF150 | InterPro:TF_Kbox | UniParc:UPI0004EECC29 | : | : | : |
Description
BnaCnng46740DBnaCnng46740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JJ18]
Coordinates
chrLK034750:-:342..1450
Molecular Weight (calculated)
18560.1 Da
IEP (calculated)
8.820
GRAVY (calculated)
-0.687
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MLWPIQILYI NLTKHMVTST LFVPSELDGS FFRDSIRSTI ERYKKASDNT NTHSVQEINA AYYQQESAKL RQQIQTIQNS NRHLMGDSLS ALSVKELKQV
101: ENRLEKAISR IRSKNHELLL AEIENLQKRE IELDNESVYL RTKIAEVERF QQHYHQNG
101: ENRLEKAISR IRSKNHELLL AEIENLQKRE IELDNESVYL RTKIAEVERF QQHYHQNG
001: MGRGKIEIKR IENSTNRQVT FCKRRNGLLK KAYELSVLCD AEVALIVFST RGRLYEYANN NIRSTIERYK KACSDSTNTS TVQEINAAYY QQESAKLRQQ
101: IQTIQNSNRN LMGDSLSSLS VKELKQVENR LEKAISRIRS KKHELLLVEI ENAQKREIEL DNENIYLRTK VAEVERYQQH HHQMVSGSEI NAIEALASRN
201: YFAHSIMTAG SGSGNGGSYS DPDKKILHLG
101: IQTIQNSNRN LMGDSLSSLS VKELKQVENR LEKAISRIRS KKHELLLVEI ENAQKREIEL DNENIYLRTK VAEVERYQQH HHQMVSGSEI NAIEALASRN
201: YFAHSIMTAG SGSGNGGSYS DPDKKILHLG
Arabidopsis Description
STKK-box region and MADS-box transcription factor family protein [Source:TAIR;Acc:AT4G09960]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.