Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX98330 | Canola | nucleus | 69.83 | 97.98 |
| Bra003356.1-P | Field mustard | nucleus | 76.15 | 97.07 |
| CDX71922 | Canola | nucleus | 34.77 | 89.63 |
| CDY72391 | Canola | nucleus | 19.25 | 89.33 |
| CDY49254 | Canola | nucleus | 67.24 | 85.09 |
| CDX89005 | Canola | nucleus | 66.95 | 84.42 |
| CDY00589 | Canola | nucleus | 66.67 | 84.36 |
| AT3G58780.4 | Thale cress | nucleus | 68.1 | 84.34 |
| CDX79857 | Canola | nucleus | 58.91 | 84.02 |
| CDX79856 | Canola | nucleus | 21.26 | 83.15 |
| KRH14461 | Soybean | nucleus | 22.99 | 76.92 |
| KRG98899 | Soybean | nucleus | 47.7 | 67.48 |
| KRH46066 | Soybean | nucleus | 47.41 | 66.8 |
| KRH73684 | Soybean | nucleus | 46.26 | 65.45 |
| GSMUA_Achr10P... | Banana | nucleus | 40.52 | 61.57 |
| GSMUA_Achr5P06590_001 | Banana | nucleus | 30.46 | 60.57 |
| Solyc07g055920.2.1 | Tomato | nucleus | 45.98 | 59.93 |
| CDY09267 | Canola | nucleus | 42.53 | 59.44 |
| CDX78909 | Canola | nucleus | 42.82 | 59.13 |
| VIT_12s0142g00360.t01 | Wine grape | nucleus | 46.55 | 59.12 |
| PGSC0003DMT400044552 | Potato | nucleus | 42.82 | 58.66 |
| CDX98597 | Canola | nucleus | 41.95 | 58.17 |
| GSMUA_Achr6P14760_001 | Banana | nucleus | 40.52 | 55.51 |
| CDX90741 | Canola | nucleus | 36.78 | 55.41 |
| CDY60686 | Canola | cytosol, nucleus, plastid | 10.63 | 55.22 |
| Zm00001d039434_P001 | Maize | nucleus | 39.37 | 52.29 |
| EES00105 | Sorghum | nucleus | 39.94 | 51.67 |
| TraesCS5B01G115100.1 | Wheat | nucleus | 37.36 | 51.59 |
| HORVU3Hr1G026650.1 | Barley | nucleus | 39.94 | 51.29 |
| HORVU1Hr1G023620.1 | Barley | nucleus | 36.78 | 50.79 |
| TraesCS3A01G314300.1 | Wheat | nucleus | 39.66 | 50.55 |
| TraesCS1D01G262700.1 | Wheat | nucleus | 36.21 | 50.4 |
| TraesCS5D01G118200.1 | Wheat | nucleus | 36.49 | 50.4 |
| TraesCS5A01G117500.1 | Wheat | nucleus | 36.78 | 50.39 |
| TraesCS3D01G140200.2 | Wheat | nucleus | 39.66 | 50.37 |
| Zm00001d023955_P003 | Maize | nucleus | 38.22 | 50.19 |
| Os01t0201700-02 | Rice | nucleus | 39.66 | 50.0 |
| Os05t0203800-02 | Rice | nucleus | 38.79 | 49.63 |
| TraesCS1B01G273300.1 | Wheat | nucleus | 36.21 | 49.41 |
| CDY13236 | Canola | mitochondrion | 28.45 | 49.25 |
| EES15827 | Sorghum | nucleus | 37.93 | 49.07 |
| TraesCS1B01G144800.1 | Wheat | nucleus | 37.93 | 49.07 |
| TraesCS1A01G125800.1 | Wheat | nucleus | 37.64 | 48.7 |
| TraesCS1D01G127700.1 | Wheat | nucleus | 37.64 | 48.7 |
| Os12t0207000-01 | Rice | nucleus | 37.64 | 48.52 |
| Zm00001d042591_P002 | Maize | nucleus | 37.07 | 48.13 |
| CDX99406 | Canola | nucleus | 42.82 | 47.76 |
| Zm00001d041781_P001 | Maize | nucleus | 39.37 | 47.74 |
| Os01t0886200-01 | Rice | nucleus | 36.21 | 47.55 |
| EES01878 | Sorghum | nucleus | 37.64 | 47.29 |
| TraesCS1A01G262700.1 | Wheat | endoplasmic reticulum | 36.78 | 46.55 |
| CDY65347 | Canola | nucleus | 20.98 | 46.2 |
| CDY01574 | Canola | nucleus | 16.09 | 45.53 |
| CDY48451 | Canola | nucleus | 19.83 | 45.1 |
| TraesCS3B01G157500.4 | Wheat | nucleus | 39.94 | 44.84 |
| GSMUA_Achr10P... | Banana | nucleus | 41.09 | 44.83 |
| CDY60297 | Canola | nucleus | 37.07 | 44.18 |
| CDY19977 | Canola | nucleus | 12.64 | 43.14 |
| HORVU1Hr1G029220.1 | Barley | nucleus | 38.51 | 41.1 |
| OQU77603 | Sorghum | nucleus | 34.2 | 40.75 |
| Zm00001d037737_P001 | Maize | nucleus | 35.06 | 39.87 |
| Zm00001d008882_P001 | Maize | nucleus | 35.92 | 37.99 |
| CDY71878 | Canola | endoplasmic reticulum | 27.59 | 36.5 |
| CDY11824 | Canola | nucleus | 24.43 | 34.69 |
| CDY66153 | Canola | nucleus | 24.43 | 34.69 |
| CDY26462 | Canola | nucleus | 25.29 | 34.65 |
| CDY43239 | Canola | nucleus | 24.71 | 34.4 |
| CDX72465 | Canola | nucleus | 23.56 | 34.17 |
| CDY49287 | Canola | nucleus | 23.56 | 34.17 |
| CDY15724 | Canola | nucleus | 24.71 | 34.13 |
| CDY57524 | Canola | nucleus | 24.43 | 34.0 |
| CDX69345 | Canola | nucleus | 22.13 | 33.92 |
| CDY18911 | Canola | nucleus | 22.99 | 33.76 |
| CDX69036 | Canola | nucleus | 23.28 | 33.75 |
| CDX75412 | Canola | nucleus | 23.28 | 33.75 |
| CDY34718 | Canola | nucleus | 24.43 | 33.73 |
| CDX69499 | Canola | nucleus | 25.57 | 33.71 |
| CDY27603 | Canola | nucleus | 24.43 | 33.6 |
| CDX78653 | Canola | nucleus | 25.0 | 33.59 |
| CDY34564 | Canola | nucleus | 20.98 | 33.49 |
| CDY36077 | Canola | nucleus | 21.26 | 33.48 |
| CDX84935 | Canola | nucleus | 24.14 | 33.47 |
| CDX70651 | Canola | nucleus | 24.71 | 33.2 |
| CDX90394 | Canola | nucleus | 21.84 | 33.19 |
| CDY25613 | Canola | nucleus | 21.55 | 32.89 |
| CDX75686 | Canola | nucleus | 21.55 | 32.75 |
| CDX89496 | Canola | nucleus | 21.55 | 32.75 |
| CDY53885 | Canola | nucleus | 24.14 | 32.68 |
| CDX74754 | Canola | nucleus | 23.85 | 32.42 |
| CDY02185 | Canola | nucleus | 22.41 | 32.37 |
| CDY03905 | Canola | nucleus | 25.0 | 32.22 |
| CDY42841 | Canola | nucleus | 22.13 | 32.08 |
| CDY16832 | Canola | nucleus | 22.13 | 31.95 |
| CDY18912 | Canola | nucleus | 22.13 | 31.95 |
| CDY58690 | Canola | nucleus | 22.13 | 31.95 |
| CDY47002 | Canola | nucleus | 21.84 | 31.54 |
| CDY04164 | Canola | nucleus | 22.99 | 31.01 |
| CDX89097 | Canola | nucleus | 21.26 | 30.08 |
| CDY02978 | Canola | nucleus | 22.13 | 30.08 |
| CDY51202 | Canola | nucleus | 22.13 | 29.96 |
| CDY45899 | Canola | nucleus | 21.26 | 29.72 |
| CDX86353 | Canola | nucleus | 20.98 | 29.32 |
| CDY00082 | Canola | nucleus | 20.69 | 29.03 |
| CDY65811 | Canola | nucleus | 21.26 | 28.91 |
| CDY33554 | Canola | nucleus | 20.98 | 28.52 |
| CDX95960 | Canola | nucleus | 20.69 | 28.12 |
| CDY04265 | Canola | nucleus | 22.13 | 27.8 |
| CDY07357 | Canola | nucleus | 22.13 | 26.64 |
| CDY33113 | Canola | nucleus | 22.99 | 25.89 |
| CDX71166 | Canola | nucleus | 22.13 | 22.13 |
| CDX85287 | Canola | nucleus | 10.92 | 20.32 |
| CDY42485 | Canola | nucleus | 21.84 | 20.11 |
| CDY35780 | Canola | nucleus | 10.92 | 19.29 |
| CDY45709 | Canola | nucleus | 7.47 | 15.03 |
| CDY49686 | Canola | nucleus | 7.47 | 15.03 |
| CDY65346 | Canola | cytosol | 0.86 | 12.0 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | GO:A0A078BT24 | EnsemblPlants:CDX67765 | ProteinID:CDX67765 | ProteinID:CDX67765.1 |
| ncoils:Coil | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00098954001 | InterPro:IPR002100 | InterPro:IPR002487 |
| InterPro:IPR036879 | InterPro:MADS_MEF2-like | PFAM:PF00319 | PFAM:PF01486 | PRINTS:PR00404 | ScanProsite:PS00350 |
| PFscan:PS50066 | PFscan:PS51297 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF150 | SMART:SM00432 | SUPFAM:SSF55455 |
| InterPro:TF_Kbox | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI0004EEB23A | SEG:seg | : |
Description
BnaA07g18050D
Coordinates
chrLK031787:+:2153183..2159609
Molecular Weight (calculated)
39773.7 Da
IEP (calculated)
9.559
GRAVY (calculated)
-0.639
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MIMTIRMIGH HLMDSLISCS LIKLSSHHFF SFLDPWSQIG LLKIRLTAKR GPTQEGKDKY DVLGLEFSVE HVIKGCKSGF PTKNKLYGTK IEERIKIEES
101: MEEGGSSHDA ESSKKLVRGK IEIKRIENTT SRQVTFCKRR NGLLKKAYEL SVLCDAEVAL VIFSTRGRLY EYANNSVKGT IERYKKACSD AVNPPSVTEA
201: NTQYYQQEAS KLRRQIRDIQ NSNRHIVGES LGSLNFKELK NLEGRLEKGI SRVRSKKNEL LMAEIEYMQK REMELQHDNM YLRAKISQGA RLNPEQQDSS
301: VIQGTAVYES GLSSHDQSQH YNRNYIPVNL LEPNQQFSGQ DQPPLQLV
101: MEEGGSSHDA ESSKKLVRGK IEIKRIENTT SRQVTFCKRR NGLLKKAYEL SVLCDAEVAL VIFSTRGRLY EYANNSVKGT IERYKKACSD AVNPPSVTEA
201: NTQYYQQEAS KLRRQIRDIQ NSNRHIVGES LGSLNFKELK NLEGRLEKGI SRVRSKKNEL LMAEIEYMQK REMELQHDNM YLRAKISQGA RLNPEQQDSS
301: VIQGTAVYES GLSSHDQSQH YNRNYIPVNL LEPNQQFSGQ DQPPLQLV
001: MSYIGSMEEG GSSHDAESSK KLGRGKIEIK RIENTTNRQV TFCKRRNGLL KKAYELSVLC DAEVALVIFS TRGRLYEYAN NSVRGTIERY KKACSDAVNP
101: PSVTEANTQY YQQEASKLRR QIRDIQNSNR HIVGESLGSL NFKELKNLEG RLEKGISRVR SKKNELLVAE IEYMQKREME LQHNNMYLRA KIAEGARLNP
201: DQQESSVIQG TTVYESGVSS HDQSQHYNRN YIPVNLLEPN QQFSGQDQPP LQLV
101: PSVTEANTQY YQQEASKLRR QIRDIQNSNR HIVGESLGSL NFKELKNLEG RLEKGISRVR SKKNELLVAE IEYMQKREME LQHNNMYLRA KIAEGARLNP
201: DQQESSVIQG TTVYESGVSS HDQSQHYNRN YIPVNLLEPN QQFSGQDQPP LQLV
Arabidopsis Description
SHP1K-box region and MADS-box transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LM26]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.