Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH64836 | Soybean | nucleus | 53.85 | 93.33 |
| KRH11093 | Soybean | nucleus | 61.54 | 85.33 |
| KRH75125 | Soybean | nucleus | 42.31 | 72.13 |
| GSMUA_Achr5P06590_001 | Banana | nucleus | 69.23 | 41.14 |
| KRH73684 | Soybean | nucleus | 96.15 | 40.65 |
| KRG98899 | Soybean | nucleus | 87.5 | 36.99 |
| KRH46066 | Soybean | nucleus | 87.5 | 36.84 |
| KRG97386 | Soybean | nucleus | 50.0 | 36.11 |
| CDX79857 | Canola | nucleus | 78.85 | 33.61 |
| Bra004716.1-P | Field mustard | nucleus | 78.85 | 33.61 |
| PGSC0003DMT400044552 | Potato | nucleus | 80.77 | 33.07 |
| KRH21150 | Soybean | nucleus | 75.96 | 32.51 |
| CDX98330 | Canola | nucleus | 76.92 | 32.26 |
| Bra014552.1-P | Field mustard | nucleus | 76.92 | 32.26 |
| KRH40560 | Soybean | nucleus | 48.08 | 32.26 |
| AT2G42830.2 | Thale cress | nucleus | 76.92 | 32.26 |
| Bra007419.1-P | Field mustard | nucleus | 75.96 | 32.24 |
| KRH42930 | Soybean | nucleus | 74.04 | 31.69 |
| Solyc07g055920.2.1 | Tomato | nucleus | 80.77 | 31.46 |
| GSMUA_Achr10P... | Banana | nucleus | 69.23 | 31.44 |
| KRH56460 | Soybean | nucleus | 66.35 | 31.08 |
| KRH59043 | Soybean | nucleus | 72.12 | 30.86 |
| AT3G58780.4 | Thale cress | nucleus | 79.81 | 29.54 |
| Bra003356.1-P | Field mustard | nucleus | 76.92 | 29.3 |
| CDY49254 | Canola | nucleus | 75.96 | 28.73 |
| CDX89005 | Canola | nucleus | 75.96 | 28.62 |
| CDY00589 | Canola | nucleus | 75.0 | 28.36 |
| VIT_12s0142g00360.t01 | Wine grape | nucleus | 74.04 | 28.1 |
| GSMUA_Achr6P14760_001 | Banana | nucleus | 68.27 | 27.95 |
| Zm00001d039434_P001 | Maize | nucleus | 70.19 | 27.86 |
| Os05t0203800-02 | Rice | nucleus | 72.12 | 27.57 |
| TraesCS5D01G118200.1 | Wheat | nucleus | 66.35 | 27.38 |
| TraesCS5B01G115100.1 | Wheat | nucleus | 66.35 | 27.38 |
| TraesCS5A01G117500.1 | Wheat | nucleus | 66.35 | 27.17 |
| TraesCS1D01G127700.1 | Wheat | nucleus | 70.19 | 27.14 |
| TraesCS1A01G125800.1 | Wheat | nucleus | 70.19 | 27.14 |
| TraesCS1B01G144800.1 | Wheat | nucleus | 70.19 | 27.14 |
| EES00105 | Sorghum | nucleus | 70.19 | 27.14 |
| HORVU1Hr1G023620.1 | Barley | nucleus | 65.38 | 26.98 |
| HORVU3Hr1G026650.1 | Barley | nucleus | 70.19 | 26.94 |
| Os01t0201700-02 | Rice | nucleus | 70.19 | 26.45 |
| TraesCS1D01G262700.1 | Wheat | nucleus | 63.46 | 26.4 |
| TraesCS3A01G314300.1 | Wheat | nucleus | 69.23 | 26.37 |
| TraesCS3D01G140200.2 | Wheat | nucleus | 69.23 | 26.28 |
| Zm00001d023955_P003 | Maize | nucleus | 66.35 | 26.04 |
| TraesCS1B01G273300.1 | Wheat | nucleus | 63.46 | 25.88 |
| Os12t0207000-01 | Rice | nucleus | 65.38 | 25.19 |
| Zm00001d041781_P001 | Maize | nucleus | 68.27 | 24.74 |
| EES15827 | Sorghum | nucleus | 63.46 | 24.54 |
| TraesCS1A01G262700.1 | Wheat | endoplasmic reticulum | 64.42 | 24.36 |
| Zm00001d042591_P002 | Maize | nucleus | 62.5 | 24.25 |
| EES01878 | Sorghum | nucleus | 63.46 | 23.83 |
| Os01t0886200-01 | Rice | nucleus | 60.58 | 23.77 |
| OQU77603 | Sorghum | nucleus | 65.38 | 23.29 |
| GSMUA_Achr10P... | Banana | nucleus | 71.15 | 23.2 |
| HORVU1Hr1G029220.1 | Barley | nucleus | 72.12 | 23.01 |
| CDX67765 | Canola | nucleus | 76.92 | 22.99 |
| TraesCS3B01G157500.4 | Wheat | nucleus | 68.27 | 22.9 |
| Zm00001d037737_P001 | Maize | nucleus | 67.31 | 22.88 |
| Zm00001d008882_P001 | Maize | nucleus | 71.15 | 22.49 |
| KRH42051 | Soybean | nucleus | 47.12 | 22.17 |
| KRH58800 | Soybean | nucleus | 50.96 | 21.72 |
| KRH42695 | Soybean | nucleus | 50.96 | 21.72 |
| KRH31527 | Soybean | nucleus | 50.0 | 21.4 |
| KRH00622 | Soybean | nucleus | 49.04 | 21.34 |
| KRH65193 | Soybean | nucleus | 50.0 | 21.22 |
| KRH48304 | Soybean | nucleus | 50.0 | 21.22 |
| KRH70973 | Soybean | nucleus | 49.04 | 20.9 |
| KRH39494 | Soybean | nucleus | 44.23 | 20.81 |
| KRH42047 | Soybean | nucleus | 48.08 | 20.75 |
| KRH75123 | Soybean | nucleus | 49.04 | 20.73 |
| KRH74451 | Soybean | nucleus | 44.23 | 20.72 |
| KRH56775 | Soybean | nucleus | 48.08 | 20.58 |
| KRH03170 | Soybean | nucleus | 48.08 | 20.58 |
| KRH10635 | Soybean | nucleus | 49.04 | 20.48 |
| KRH45412 | Soybean | nucleus | 46.15 | 20.34 |
| KRH07467 | Soybean | nucleus | 46.15 | 20.34 |
| KRH45097 | Soybean | nucleus | 49.04 | 20.32 |
| KRH18339 | Soybean | nucleus | 48.08 | 20.08 |
| KRG93698 | Soybean | nucleus | 48.08 | 20.08 |
| KRH01380 | Soybean | nucleus | 49.04 | 20.0 |
| KRG91419 | Soybean | nucleus | 44.23 | 20.0 |
| KRH35403 | Soybean | nucleus | 44.23 | 19.83 |
| KRH16883 | Soybean | nucleus | 45.19 | 19.67 |
| KRH72490 | Soybean | nucleus | 45.19 | 19.34 |
| KRH09173 | Soybean | nucleus | 43.27 | 19.07 |
| KRH70974 | Soybean | nucleus | 44.23 | 18.93 |
| KRH38649 | Soybean | nucleus | 42.31 | 18.03 |
| KRH56774 | Soybean | nucleus | 41.35 | 17.62 |
| KRH54740 | Soybean | nucleus | 41.35 | 17.62 |
| KRH03173 | Soybean | nucleus | 40.38 | 17.57 |
| KRH63171 | Soybean | nucleus | 40.38 | 17.21 |
| KRH45099 | Soybean | nucleus | 40.38 | 16.94 |
| KRG93701 | Soybean | nucleus | 39.42 | 16.8 |
| KRH18331 | Soybean | nucleus | 38.46 | 16.39 |
| KRH01382 | Soybean | nucleus | 39.42 | 16.21 |
| KRH11095 | Soybean | nucleus | 15.38 | 9.58 |
| KRH64830 | Soybean | nucleus | 11.54 | 7.45 |
| KRH21716 | Soybean | nucleus | 5.77 | 3.14 |
| KRH66116 | Soybean | nucleus, plastid | 0.0 | 0.0 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | UniProt:A0A0R0G8B9 | EMBL:ACUP02008502 | ncoils:Coil | EnsemblPlantsGene:GLYMA_14G027200 |
| GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 |
| GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | ProteinID:KRH14460.1 | EnsemblPlants:KRH14461 | ProteinID:KRH14461 |
| ProteinID:KRH14461.1 | InterPro:MADS_MEF2-like | PFAM:PF00319 | PRINTS:PR00404 | ScanProsite:PS00350 | PFscan:PS50066 |
| PANTHER:PTHR11945 | PANTHER:PTHR11945:SF150 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf |
| UniParc:UPI0006EDA649 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr14:+:1967656..1971891
Molecular Weight (calculated)
11650.8 Da
IEP (calculated)
9.567
GRAVY (calculated)
-0.660
Length
104 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFPNEAIPE GCSQKKTGRG KIEIKRIENT TNRQVTFCKR RNGLLKKAYE LSVLCDAEVA LVVFSSRGRL YEYANNSVRG TIDRYKKACA ASTNPESVSE
101: ANTQ
101: ANTQ
001: MEGGASNEVA ESSKKIGRGK IEIKRIENTT NRQVTFCKRR NGLLKKAYEL SVLCDAEVAL VIFSTRGRLY EYANNSVRGT IERYKKACSD AVNPPTITEA
101: NTQYYQQEAS KLRRQIRDIQ NLNRHILGES LGSLNFKELK NLESRLEKGI SRVRSKKHEM LVAEIEYMQK REIELQNDNM YLRSKITERT GLQQQESSVI
201: HQGTVYESGV TSSHQSGQYN RNYIAVNLLE PNQNSSNQDQ PPLQLV
101: NTQYYQQEAS KLRRQIRDIQ NLNRHILGES LGSLNFKELK NLESRLEKGI SRVRSKKHEM LVAEIEYMQK REIELQNDNM YLRSKITERT GLQQQESSVI
201: HQGTVYESGV TSSHQSGQYN RNYIAVNLLE PNQNSSNQDQ PPLQLV
Arabidopsis Description
SHP2K-box region and MADS-box transcription factor family protein [Source:TAIR;Acc:AT2G42830]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.