Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH38649 | Soybean | nucleus | 91.53 | 88.52 |
| KRH75125 | Soybean | nucleus | 20.34 | 78.69 |
| KRH64836 | Soybean | nucleus | 18.22 | 71.67 |
| KRG91419 | Soybean | nucleus | 59.32 | 60.87 |
| KRH35403 | Soybean | nucleus | 59.75 | 60.78 |
| KRG97386 | Soybean | nucleus | 34.32 | 56.25 |
| KRH11093 | Soybean | nucleus | 17.8 | 56.0 |
| KRH40560 | Soybean | nucleus | 35.17 | 53.55 |
| VIT_16s0022g02330.t01 | Wine grape | nucleus | 47.46 | 44.98 |
| KRH48304 | Soybean | nucleus | 45.76 | 44.08 |
| KRH65193 | Soybean | nucleus | 45.34 | 43.67 |
| KRH14461 | Soybean | nucleus | 19.07 | 43.27 |
| KRH00622 | Soybean | nucleus | 43.22 | 42.68 |
| KRH42695 | Soybean | nucleus | 43.64 | 42.21 |
| KRG93698 | Soybean | nucleus | 44.49 | 42.17 |
| KRH18339 | Soybean | nucleus | 44.49 | 42.17 |
| KRH58800 | Soybean | nucleus | 43.22 | 41.8 |
| KRH31527 | Soybean | nucleus | 42.37 | 41.15 |
| KRH45097 | Soybean | nucleus | 43.64 | 41.04 |
| KRH70973 | Soybean | nucleus | 41.95 | 40.57 |
| KRH01380 | Soybean | nucleus | 43.64 | 40.39 |
| KRH75123 | Soybean | nucleus | 41.53 | 39.84 |
| KRH56775 | Soybean | nucleus | 39.83 | 38.68 |
| KRH54740 | Soybean | nucleus | 39.83 | 38.52 |
| KRH03170 | Soybean | nucleus | 39.41 | 38.27 |
| KRH07467 | Soybean | nucleus | 37.71 | 37.71 |
| KRH63171 | Soybean | nucleus | 38.98 | 37.7 |
| KRH45412 | Soybean | nucleus | 37.29 | 37.29 |
| KRH03173 | Soybean | nucleus | 36.86 | 36.4 |
| KRH56460 | Soybean | nucleus | 33.9 | 36.04 |
| KRH70974 | Soybean | nucleus | 36.86 | 35.8 |
| KRH45099 | Soybean | nucleus | 37.29 | 35.48 |
| KRH56774 | Soybean | nucleus | 36.44 | 35.25 |
| KRH18331 | Soybean | nucleus | 36.02 | 34.84 |
| KRH74451 | Soybean | nucleus | 32.2 | 34.23 |
| KRG93701 | Soybean | nucleus | 35.17 | 34.02 |
| KRH01382 | Soybean | nucleus | 36.44 | 33.99 |
| KRH16883 | Soybean | nucleus | 33.47 | 33.05 |
| KRH39494 | Soybean | nucleus | 30.93 | 33.03 |
| KRH42051 | Soybean | nucleus | 30.51 | 32.58 |
| KRH21150 | Soybean | nucleus | 33.05 | 32.1 |
| KRH10635 | Soybean | nucleus | 33.47 | 31.73 |
| KRG98899 | Soybean | nucleus | 33.05 | 31.71 |
| KRH73684 | Soybean | nucleus | 33.05 | 31.71 |
| KRH46066 | Soybean | nucleus | 33.05 | 31.58 |
| KRH42930 | Soybean | nucleus | 31.78 | 30.86 |
| KRH72490 | Soybean | nucleus | 31.78 | 30.86 |
| KRH42047 | Soybean | nucleus | 31.36 | 30.71 |
| KRH59043 | Soybean | nucleus | 30.51 | 29.63 |
| KRH64830 | Soybean | nucleus | 16.1 | 23.6 |
| KRH11095 | Soybean | nucleus | 16.1 | 22.75 |
| KRH21716 | Soybean | nucleus | 16.1 | 19.9 |
| KRH66116 | Soybean | nucleus, plastid | 2.54 | 7.59 |
Protein Annotations
| EntrezGene:100779279 | MapMan:15.5.14 | Gene3D:3.40.1810.10 | EMBL:ACUP02010272 | ncoils:Coil | EnsemblPlantsGene:GLYMA_16G200700 |
| GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0045944 | GO:GO:0046983 | UniProt:I1MQ50 | InterPro:IPR002100 | InterPro:IPR002487 | InterPro:IPR036879 |
| EnsemblPlants:KRH09173 | ProteinID:KRH09173 | ProteinID:KRH09173.1 | InterPro:MADS_MEF2-like | PFAM:PF00319 | PFAM:PF01486 |
| PRINTS:PR00404 | ScanProsite:PS00350 | PFscan:PS50066 | PFscan:PS51297 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF146 |
| SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_Kbox | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI000233B05F |
Description
hypothetical protein
Coordinates
chr16:-:36180127..36187318
Molecular Weight (calculated)
27567.5 Da
IEP (calculated)
9.062
GRAVY (calculated)
-0.887
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGRVVLER IENKINRQVT FSKRRSGLLK KAFELSVLCD AEVALIIFSS RGKLFQYSST DINKIIERYR QCRYSKSQTD DSLEHDSQSS YHEFLKLRAK
101: YESLELTQRH FQGEELEPLS FKDLQSLEKQ LDITLALTRQ HQTKKLLARA DELREKVHKL EDLNKQLESK EKDEFSSFIL DNNNYIQVHA TQGDQFESGT
201: TLNTCRFQRQ DSKEKAIDTK TDGSQSSHNK NKGWLL
101: YESLELTQRH FQGEELEPLS FKDLQSLEKQ LDITLALTRQ HQTKKLLARA DELREKVHKL EDLNKQLESK EKDEFSSFIL DNNNYIQVHA TQGDQFESGT
201: TLNTCRFQRQ DSKEKAIDTK TDGSQSSHNK NKGWLL
001: MGRGRVEMKR IENKINRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSS RGKLYEFGSV GIESTIERYN RCYNCSLSNN KPEETTQSWC QEVTKLKSKY
101: ESLVRTNRNL LGEDLGEMGV KELQALERQL EAALTATRQR KTQVMMEEME DLRKKERQLG DINKQLKIKF ETEGHAFKTF QDLWANSAAS VAGDPNNSEF
201: PVEPSHPNVL DCNTEPFLQI GFQQHYYVQG EGSSVSKSNV AGETNFVQGW VL
101: ESLVRTNRNL LGEDLGEMGV KELQALERQL EAALTATRQR KTQVMMEEME DLRKKERQLG DINKQLKIKF ETEGHAFKTF QDLWANSAAS VAGDPNNSEF
201: PVEPSHPNVL DCNTEPFLQI GFQQHYYVQG EGSSVSKSNV AGETNFVQGW VL
Arabidopsis Description
AGL6AGAMOUS-like protein 6 [Source:UniProtKB/TrEMBL;Acc:Q1PEU3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.