Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH45412 | Soybean | nucleus | 97.03 | 97.03 |
| KRH75125 | Soybean | nucleus | 25.0 | 96.72 |
| KRH70974 | Soybean | nucleus | 83.9 | 81.48 |
| Bra004361.1-P | Field mustard | nucleus | 60.17 | 75.13 |
| KRH64836 | Soybean | nucleus | 17.8 | 70.0 |
| AT1G69120.1 | Thale cress | nucleus | 75.0 | 69.14 |
| Solyc05g056620.1.1 | Tomato | nucleus | 71.19 | 68.85 |
| PGSC0003DMT400072888 | Potato | nucleus | 71.19 | 68.85 |
| Bra038326.1-P | Field mustard | nucleus | 73.73 | 67.97 |
| CDY65811 | Canola | nucleus | 73.73 | 67.97 |
| CDY33554 | Canola | nucleus | 73.31 | 67.58 |
| CDX95960 | Canola | nucleus | 72.88 | 67.19 |
| Bra004007.1-P | Field mustard | nucleus | 72.88 | 63.47 |
| CDY04265 | Canola | nucleus | 73.73 | 62.82 |
| KRG97386 | Soybean | nucleus | 37.29 | 61.11 |
| KRH63171 | Soybean | nucleus | 63.14 | 61.07 |
| CDY07357 | Canola | nucleus | 74.15 | 60.55 |
| KRH54740 | Soybean | nucleus | 62.29 | 60.25 |
| KRH11093 | Soybean | nucleus | 18.22 | 57.33 |
| EER90862 | Sorghum | nucleus | 59.32 | 57.14 |
| KRH03173 | Soybean | nucleus | 57.2 | 56.49 |
| TraesCS5A01G391700.1 | Wheat | nucleus | 58.05 | 56.15 |
| GSMUA_Achr2P13650_001 | Banana | nucleus | 58.05 | 55.69 |
| GSMUA_Achr4P23540_001 | Banana | nucleus | 58.47 | 55.65 |
| GSMUA_Achr6P00050_001 | Banana | nucleus | 56.78 | 55.37 |
| KRH56774 | Soybean | nucleus | 57.2 | 55.33 |
| Os03t0752800-02 | Rice | nucleus | 56.36 | 54.06 |
| TraesCS5B01G396600.2 | Wheat | nucleus | 57.2 | 53.78 |
| GSMUA_Achr7P00460_001 | Banana | nucleus | 56.78 | 53.6 |
| TraesCS2D01G262700.1 | Wheat | nucleus | 61.02 | 53.14 |
| KRH40560 | Soybean | nucleus | 34.75 | 52.9 |
| TraesCS5D01G401500.1 | Wheat | cytosol, nucleus | 56.78 | 52.76 |
| EER95753 | Sorghum | nucleus | 60.17 | 52.59 |
| TraesCS2B01G281000.1 | Wheat | nucleus | 61.02 | 52.55 |
| TraesCS2A01G261200.2 | Wheat | nucleus | 61.02 | 52.55 |
| Os07t0108900-02 | Rice | nucleus | 58.9 | 52.06 |
| Zm00001d018667_P003 | Maize | nucleus | 59.75 | 52.03 |
| GSMUA_Achr8P04330_001 | Banana | nucleus | 53.81 | 51.84 |
| GSMUA_Achr10P... | Banana | nucleus | 61.86 | 51.23 |
| KRH45099 | Soybean | nucleus | 53.81 | 51.21 |
| EER97510 | Sorghum | nucleus | 54.66 | 50.99 |
| Zm00001d013259_P002 | Maize | nucleus | 58.9 | 49.82 |
| KRH18331 | Soybean | nucleus | 51.27 | 49.59 |
| Zm00001d022088_P004 | Maize | nucleus | 53.81 | 49.22 |
| KRG93701 | Soybean | nucleus | 50.85 | 49.18 |
| GSMUA_Achr3P30440_001 | Banana | nucleus | 47.88 | 49.13 |
| GSMUA_Achr3P02280_001 | Banana | nucleus | 53.81 | 48.29 |
| Os07t0605200-01 | Rice | nucleus | 50.42 | 47.79 |
| Zm00001d034045_P003 | Maize | nucleus | 57.63 | 46.74 |
| Zm00001d007949_P001 | Maize | nucleus | 60.17 | 46.56 |
| HORVU2Hr1G063800.7 | Barley | nucleus, plastid | 60.17 | 46.41 |
| KRH14461 | Soybean | nucleus | 20.34 | 46.15 |
| TraesCS2D01G181400.3 | Wheat | nucleus | 52.12 | 46.07 |
| TraesCS2B01G200800.1 | Wheat | nucleus | 52.12 | 46.07 |
| TraesCS2A01G174300.3 | Wheat | nucleus | 51.69 | 45.69 |
| GSMUA_Achr3P25280_001 | Banana | nucleus | 50.85 | 45.11 |
| KRH01382 | Soybean | nucleus | 48.31 | 45.06 |
| HORVU5Hr1G095630.3 | Barley | nucleus, plastid | 57.2 | 43.97 |
| KRH31527 | Soybean | nucleus | 44.07 | 42.8 |
| KRH42695 | Soybean | nucleus | 44.07 | 42.62 |
| KRH58800 | Soybean | nucleus | 44.07 | 42.62 |
| KRH03170 | Soybean | nucleus | 43.64 | 42.39 |
| KRH48304 | Soybean | nucleus | 42.8 | 41.22 |
| KRH56775 | Soybean | nucleus | 42.37 | 41.15 |
| KRH45097 | Soybean | nucleus | 43.22 | 40.64 |
| KRG93698 | Soybean | nucleus | 42.37 | 40.16 |
| KRH18339 | Soybean | nucleus | 42.37 | 40.16 |
| KRH65193 | Soybean | nucleus | 41.53 | 40.0 |
| KRH01380 | Soybean | nucleus | 43.22 | 40.0 |
| KRH70973 | Soybean | nucleus | 41.1 | 39.75 |
| KRH00622 | Soybean | nucleus | 40.25 | 39.75 |
| KRH75123 | Soybean | nucleus | 40.68 | 39.02 |
| KRH09173 | Soybean | nucleus | 37.71 | 37.71 |
| Os12t0501700-00 | Rice | nucleus | 36.44 | 36.91 |
| KRH38649 | Soybean | nucleus | 37.71 | 36.48 |
| KXG23502 | Sorghum | nucleus | 34.32 | 36.32 |
| KRH56460 | Soybean | nucleus | 33.9 | 36.04 |
| KRH21150 | Soybean | nucleus | 36.44 | 35.39 |
| KRH73684 | Soybean | nucleus | 36.86 | 35.37 |
| KRG91419 | Soybean | nucleus | 34.32 | 35.22 |
| KRG98899 | Soybean | nucleus | 36.44 | 34.96 |
| KRH46066 | Soybean | nucleus | 36.44 | 34.82 |
| KRH74451 | Soybean | nucleus | 32.63 | 34.68 |
| KRH35403 | Soybean | nucleus | 33.9 | 34.48 |
| KRH42930 | Soybean | nucleus | 35.17 | 34.16 |
| KRH42051 | Soybean | nucleus | 31.78 | 33.94 |
| KRH39494 | Soybean | nucleus | 31.78 | 33.94 |
| Zm00001d023736_P001 | Maize | nucleus | 36.86 | 33.85 |
| KRH10635 | Soybean | nucleus | 35.59 | 33.73 |
| KRH42047 | Soybean | nucleus | 33.9 | 33.2 |
| KRH59043 | Soybean | nucleus | 33.9 | 32.92 |
| KRH16883 | Soybean | nucleus | 32.63 | 32.22 |
| KRH72490 | Soybean | nucleus | 31.78 | 30.86 |
| KRH11095 | Soybean | nucleus | 18.22 | 25.75 |
| KRH64830 | Soybean | nucleus | 16.1 | 23.6 |
| KRH21716 | Soybean | nucleus | 18.64 | 23.04 |
| KRH66116 | Soybean | nucleus, plastid | 4.66 | 13.92 |
Protein Annotations
| EntrezGene:100810129 | MapMan:15.5.14 | Gene3D:3.40.1810.10 | EMBL:ACUP02010017 | ncoils:Coil | EnsemblPlantsGene:GLYMA_16G091300 |
| GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0045944 | GO:GO:0046983 | UniProt:I1MMB6 | InterPro:IPR002100 | InterPro:IPR002487 | InterPro:IPR036879 |
| EnsemblPlants:KRH07467 | ProteinID:KRH07467 | ProteinID:KRH07467.1 | InterPro:MADS_MEF2-like | PFAM:PF00319 | PFAM:PF01486 |
| PRINTS:PR00404 | ScanProsite:PS00350 | PFscan:PS50066 | PFscan:PS51297 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF244 |
| SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_Kbox | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI000233B1C0 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr16:+:14155790..14161854
Molecular Weight (calculated)
27456.0 Da
IEP (calculated)
9.066
GRAVY (calculated)
-0.707
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGRVQLKR IENKINRQVT FSKRRAGLLK KAHEISVLCD AEVALIVFSH KGKLFEYATD SCMEKILERY ERYAYAERQL VANDSESQGN WTIEYTRLKA
101: KIDLLQRNHR HYMGEDLGSM SLKELQSLEQ QLDTALKQIR TRRNQLMYES ISELQKKEKV IQEQNNMLAK KIKEKEKVAA QQAQWEHPNH GVNASFLLPQ
201: PLLNMGGNYR EEASEVGRNE LDLTLEPLYS CHLGCF
101: KIDLLQRNHR HYMGEDLGSM SLKELQSLEQ QLDTALKQIR TRRNQLMYES ISELQKKEKV IQEQNNMLAK KIKEKEKVAA QQAQWEHPNH GVNASFLLPQ
201: PLLNMGGNYR EEASEVGRNE LDLTLEPLYS CHLGCF
001: MGRGRVQLKR IENKINRQVT FSKRRAGLLK KAHEISVLCD AEVALVVFSH KGKLFEYSTD SCMEKILERY ERYSYAERQL IAPESDVNTN WSMEYNRLKA
101: KIELLERNQR HYLGEDLQAM SPKELQNLEQ QLDTALKHIR TRKNQLMYES INELQKKEKA IQEQNSMLSK QIKEREKILR AQQEQWDQQN QGHNMPPPLP
201: PQQHQIQHPY MLSHQPSPFL NMGGLYQEDD PMAMRRNDLE LTLEPVYNCN LGCFAA
101: KIELLERNQR HYLGEDLQAM SPKELQNLEQ QLDTALKHIR TRKNQLMYES INELQKKEKA IQEQNSMLSK QIKEREKILR AQQEQWDQQN QGHNMPPPLP
201: PQQHQIQHPY MLSHQPSPFL NMGGLYQEDD PMAMRRNDLE LTLEPVYNCN LGCFAA
Arabidopsis Description
AP1AP1 [Source:UniProtKB/TrEMBL;Acc:A0A178W846]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.