Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G391700.1 | Wheat | nucleus | 75.57 | 95.08 |
| TraesCS5B01G396600.2 | Wheat | nucleus | 76.55 | 93.63 |
| TraesCS5D01G401500.1 | Wheat | cytosol, nucleus | 76.55 | 92.52 |
| KRH75125 | Soybean | nucleus | 17.59 | 88.52 |
| EER90862 | Sorghum | nucleus | 65.8 | 82.45 |
| Os03t0752800-02 | Rice | nucleus | 57.65 | 71.95 |
| Zm00001d013259_P002 | Maize | nucleus | 64.5 | 70.97 |
| Zm00001d034045_P003 | Maize | nucleus | 61.56 | 64.95 |
| CDY19977 | Canola | nucleus | 20.52 | 61.76 |
| Bra004361.1-P | Field mustard | nucleus | 37.78 | 61.38 |
| VIT_01s0011g00100.t01 | Wine grape | nucleus | 45.6 | 58.09 |
| HORVU2Hr1G063800.7 | Barley | nucleus, plastid | 57.65 | 57.84 |
| KRH07467 | Soybean | nucleus | 43.97 | 57.2 |
| VIT_17s0000g04990.t01 | Wine grape | nucleus | 45.28 | 57.2 |
| Solyc06g069430.2.1 | Tomato | nucleus | 45.6 | 57.14 |
| CDY36077 | Canola | nucleus | 40.72 | 56.56 |
| CDY34564 | Canola | nucleus | 40.07 | 56.42 |
| PGSC0003DMT400010451 | Potato | nucleus | 45.93 | 56.4 |
| Solyc03g114830.2.1 | Tomato | nucleus | 45.28 | 56.28 |
| PGSC0003DMT400063313 | Potato | nucleus | 45.28 | 56.05 |
| KRH45412 | Soybean | nucleus | 43.0 | 55.93 |
| KRH70974 | Soybean | nucleus | 43.97 | 55.56 |
| Bra025411.1-P | Field mustard | nucleus | 31.6 | 55.11 |
| KRH63171 | Soybean | nucleus | 43.32 | 54.51 |
| VIT_14s0083g01030.t01 | Wine grape | nucleus | 43.65 | 54.25 |
| KRH54740 | Soybean | nucleus | 43.0 | 54.1 |
| KRH03173 | Soybean | nucleus | 41.69 | 53.56 |
| Solyc05g056620.1.1 | Tomato | nucleus | 42.35 | 53.28 |
| PGSC0003DMT400072888 | Potato | nucleus | 42.02 | 52.87 |
| KRH56774 | Soybean | nucleus | 42.02 | 52.87 |
| CDY58690 | Canola | nucleus | 41.37 | 52.7 |
| AT5G60910.1 | Thale cress | nucleus | 41.37 | 52.48 |
| CDY02185 | Canola | nucleus | 41.04 | 52.28 |
| CDY42841 | Canola | nucleus | 40.72 | 52.08 |
| Bra029347.1-P | Field mustard | nucleus | 40.72 | 52.08 |
| Bra012997.1-P | Field mustard | nucleus | 40.72 | 51.87 |
| AT1G69120.1 | Thale cress | nucleus | 43.0 | 51.56 |
| Bra035952.1-P | Field mustard | nucleus | 40.39 | 51.45 |
| CDY16832 | Canola | nucleus | 40.39 | 51.45 |
| CDY47002 | Canola | nucleus | 40.39 | 51.45 |
| PGSC0003DMT400068325 | Potato | nucleus | 38.44 | 50.43 |
| Bra038326.1-P | Field mustard | nucleus | 41.69 | 50.0 |
| CDX95960 | Canola | nucleus | 41.69 | 50.0 |
| CDY65811 | Canola | nucleus | 41.69 | 50.0 |
| CDY33554 | Canola | nucleus | 41.37 | 49.61 |
| Bra011021.1-P | Field mustard | nucleus | 41.04 | 49.61 |
| PGSC0003DMT400003485 | Potato | nucleus | 39.74 | 49.39 |
| Solyc02g065730.1.1 | Tomato | nucleus | 37.13 | 48.72 |
| AT1G26310.1 | Thale cress | nucleus | 40.39 | 48.63 |
| Solyc02g089210.2.1 | Tomato | nucleus | 39.41 | 48.4 |
| Bra004007.1-P | Field mustard | nucleus | 42.35 | 47.97 |
| CDY04265 | Canola | nucleus | 43.0 | 47.65 |
| KRH45099 | Soybean | nucleus | 38.11 | 47.18 |
| KRG93701 | Soybean | nucleus | 37.46 | 47.13 |
| CDY07357 | Canola | nucleus | 43.32 | 46.02 |
| KRH18331 | Soybean | nucleus | 36.16 | 45.49 |
| KRH01382 | Soybean | nucleus | 36.81 | 44.66 |
| Bra036201.1-P | Field mustard | nucleus | 35.5 | 43.95 |
| CDY00082 | Canola | nucleus | 35.5 | 43.95 |
| AT3G30260.1 | Thale cress | nucleus | 34.2 | 42.17 |
| CDX86353 | Canola | nucleus | 34.2 | 42.17 |
| CDY45899 | Canola | nucleus | 33.88 | 41.77 |
| HORVU5Hr1G076400.1 | Barley | nucleus | 33.88 | 41.27 |
| HORVU5Hr1G095710.1 | Barley | nucleus | 31.6 | 40.93 |
| HORVU0Hr1G032300.1 | Barley | nucleus | 34.85 | 40.07 |
| HORVU6Hr1G066140.9 | Barley | nucleus | 34.85 | 39.93 |
| HORVU7Hr1G054220.3 | Barley | nucleus | 33.22 | 39.84 |
| HORVU5Hr1G000370.3 | Barley | nucleus | 26.06 | 38.65 |
| HORVU7Hr1G025700.6 | Barley | nucleus | 34.2 | 38.04 |
| HORVU5Hr1G000480.1 | Barley | nucleus | 23.13 | 37.37 |
| HORVU6Hr1G073040.2 | Barley | nucleus | 28.01 | 35.68 |
| HORVU7Hr1G023940.2 | Barley | nucleus | 25.08 | 33.48 |
| HORVU1Hr1G023620.1 | Barley | nucleus | 27.04 | 32.94 |
| CDX85287 | Canola | nucleus | 19.54 | 32.09 |
| HORVU4Hr1G067680.14 | Barley | nucleus | 29.32 | 31.69 |
| HORVU1Hr1G008290.4 | Barley | nucleus | 24.1 | 30.83 |
| HORVU3Hr1G026650.1 | Barley | nucleus | 26.06 | 29.52 |
| CDY35780 | Canola | nucleus | 18.57 | 28.93 |
| HORVU7Hr1G024000.2 | Barley | nucleus | 24.76 | 28.46 |
| HORVU1Hr1G008300.3 | Barley | nucleus | 24.76 | 26.76 |
| HORVU2Hr1G080490.1 | Barley | nucleus, plastid | 26.38 | 26.47 |
| HORVU1Hr1G029220.1 | Barley | nucleus | 26.71 | 25.15 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | UniProt:A0A287SDC6 | ncoils:Coil | GO:GO:0000977 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 |
| EnsemblPlantsGene:HORVU5Hr1G095630 | EnsemblPlants:HORVU5Hr1G095630.3 | InterPro:IPR002100 | InterPro:IPR002487 | InterPro:IPR036879 | InterPro:MADS_MEF2-like |
| PFAM:PF00319 | PFAM:PF01486 | PRINTS:PR00404 | ScanProsite:PS00350 | PFscan:PS50066 | PFscan:PS51297 |
| PANTHER:PTHR11945 | PANTHER:PTHR11945:SF275 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_Kbox | InterPro:TF_MADSbox |
| InterPro:TF_MADSbox_sf | UniParc:UPI000B461267 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr5H:-:599122941..599133084
Molecular Weight (calculated)
34557.4 Da
IEP (calculated)
9.423
GRAVY (calculated)
-0.634
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: FKTPSHRPAG TLIWLSPLPS HFTQPPDSHG SATSPPPAPL GVAVAVARSL ARCCRCWPGP RAEMGRGKVQ LKRIENKINR QVTFSKRRSG LLKKAHEISV
101: LCDAEVGLII FSTKGKLYEF STESCMDKIL ERYERYSYAE KVLVSSESEI QGNWCHEYRK LKAKVETIQK CQKHLMGEDL ESLNLKELQQ LEQQLESSLK
201: HIRARKNQLM HESISELQKK ERSLQEENKV LQKELVEKQK AQAAQQDQTQ PQTSSSSSSF MMRDAPPVAD TSNHPAAAGE RAEDVAVQPQ VPLRTALPLW
301: MVSHING
101: LCDAEVGLII FSTKGKLYEF STESCMDKIL ERYERYSYAE KVLVSSESEI QGNWCHEYRK LKAKVETIQK CQKHLMGEDL ESLNLKELQQ LEQQLESSLK
201: HIRARKNQLM HESISELQKK ERSLQEENKV LQKELVEKQK AQAAQQDQTQ PQTSSSSSSF MMRDAPPVAD TSNHPAAAGE RAEDVAVQPQ VPLRTALPLW
301: MVSHING
001: MGRGRVQLKR IENKINRQVT FSKRRAGLLK KAHEISVLCD AEVALVVFSH KGKLFEYSTD SCMEKILERY ERYSYAERQL IAPESDVNTN WSMEYNRLKA
101: KIELLERNQR HYLGEDLQAM SPKELQNLEQ QLDTALKHIR TRKNQLMYES INELQKKEKA IQEQNSMLSK QIKEREKILR AQQEQWDQQN QGHNMPPPLP
201: PQQHQIQHPY MLSHQPSPFL NMGGLYQEDD PMAMRRNDLE LTLEPVYNCN LGCFAA
101: KIELLERNQR HYLGEDLQAM SPKELQNLEQ QLDTALKHIR TRKNQLMYES INELQKKEKA IQEQNSMLSK QIKEREKILR AQQEQWDQQN QGHNMPPPLP
201: PQQHQIQHPY MLSHQPSPFL NMGGLYQEDD PMAMRRNDLE LTLEPVYNCN LGCFAA
Arabidopsis Description
AP1AP1 [Source:UniProtKB/TrEMBL;Acc:A0A178W846]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.