Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36077 | Canola | nucleus | 75.29 | 86.88 |
| Bra011021.1-P | Field mustard | nucleus | 84.71 | 85.04 |
| CDY34564 | Canola | nucleus | 72.16 | 84.4 |
| AT1G69120.1 | Thale cress | nucleus | 77.25 | 76.95 |
| VIT_01s0011g00100.t01 | Wine grape | nucleus | 65.49 | 69.29 |
| Solyc05g056620.1.1 | Tomato | nucleus | 59.22 | 61.89 |
| PGSC0003DMT400072888 | Potato | nucleus | 59.22 | 61.89 |
| EER90862 | Sorghum | nucleus | 51.76 | 53.88 |
| GSMUA_Achr6P00050_001 | Banana | nucleus | 50.59 | 53.31 |
| GSMUA_Achr2P13650_001 | Banana | nucleus | 51.37 | 53.25 |
| TraesCS5A01G391700.1 | Wheat | nucleus | 49.8 | 52.05 |
| GSMUA_Achr7P00460_001 | Banana | nucleus | 50.59 | 51.6 |
| GSMUA_Achr4P23540_001 | Banana | nucleus | 49.41 | 50.81 |
| Os03t0752800-02 | Rice | nucleus | 48.63 | 50.41 |
| GSMUA_Achr8P04330_001 | Banana | nucleus | 48.24 | 50.2 |
| TraesCS5B01G396600.2 | Wheat | nucleus | 49.02 | 49.8 |
| AT5G60910.1 | Thale cress | nucleus | 47.06 | 49.59 |
| TraesCS5D01G401500.1 | Wheat | cytosol, nucleus | 48.63 | 48.82 |
| AT3G30260.1 | Thale cress | nucleus | 46.67 | 47.79 |
| Zm00001d018667_P003 | Maize | nucleus | 50.59 | 47.6 |
| EER97510 | Sorghum | nucleus | 47.06 | 47.43 |
| EER95753 | Sorghum | nucleus | 50.2 | 47.41 |
| Zm00001d013259_P002 | Maize | nucleus | 51.76 | 47.31 |
| TraesCS2D01G262700.1 | Wheat | nucleus | 50.2 | 47.23 |
| Os07t0108900-02 | Rice | nucleus | 49.41 | 47.19 |
| Zm00001d022088_P004 | Maize | nucleus | 47.45 | 46.9 |
| TraesCS2B01G281000.1 | Wheat | nucleus | 50.2 | 46.72 |
| TraesCS2A01G261200.2 | Wheat | nucleus | 50.2 | 46.72 |
| GSMUA_Achr3P30440_001 | Banana | nucleus | 41.96 | 46.52 |
| Os07t0605200-01 | Rice | nucleus | 44.71 | 45.78 |
| GSMUA_Achr3P02280_001 | Banana | nucleus | 46.67 | 45.25 |
| TraesCS2D01G181400.3 | Wheat | nucleus | 47.06 | 44.94 |
| TraesCS2B01G200800.1 | Wheat | nucleus | 47.06 | 44.94 |
| GSMUA_Achr10P... | Banana | nucleus | 50.2 | 44.91 |
| TraesCS2A01G174300.3 | Wheat | nucleus | 46.67 | 44.57 |
| Zm00001d034045_P003 | Maize | nucleus | 49.41 | 43.3 |
| Zm00001d007949_P001 | Maize | nucleus | 50.59 | 42.3 |
| GSMUA_Achr3P25280_001 | Banana | nucleus | 43.92 | 42.11 |
| HORVU2Hr1G063800.7 | Barley | nucleus, plastid | 49.8 | 41.5 |
| HORVU5Hr1G095630.3 | Barley | nucleus, plastid | 48.63 | 40.39 |
| AT3G02310.1 | Thale cress | nucleus | 38.43 | 39.2 |
| AT2G45650.1 | Thale cress | nucleus | 38.04 | 38.49 |
| AT1G24260.2 | Thale cress | nucleus | 37.65 | 38.25 |
| AT3G61120.1 | Thale cress | nucleus | 36.47 | 38.11 |
| AT5G15800.2 | Thale cress | nucleus | 38.04 | 37.02 |
| Os12t0501700-00 | Rice | nucleus | 33.73 | 36.91 |
| AT2G14210.2 | Thale cress | nucleus | 32.55 | 35.32 |
| AT2G03710.1 | Thale cress | nucleus | 34.51 | 34.11 |
| KXG23502 | Sorghum | nucleus | 29.8 | 34.08 |
| AT4G37940.1 | Thale cress | nucleus | 29.41 | 32.89 |
| AT3G57230.1 | Thale cress | nucleus | 30.59 | 32.5 |
| AT4G18960.1 | Thale cress | nucleus | 31.76 | 32.14 |
| AT2G42830.2 | Thale cress | nucleus | 30.98 | 31.85 |
| AT2G22630.2 | Thale cress | nucleus | 27.84 | 31.28 |
| Zm00001d023736_P001 | Maize | nucleus | 30.98 | 30.74 |
| AT3G58780.4 | Thale cress | nucleus | 30.98 | 28.11 |
| AT4G09960.4 | Thale cress | nucleus | 30.59 | 23.71 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EntrezGene:839172 | ProteinID:AAA64789.1 | ProteinID:AAC67505.1 | ProteinID:AAC67506.1 |
| ProteinID:AAC67507.1 | ProteinID:AAC67508.1 | ProteinID:AAC67509.1 | ProteinID:AAC67510.1 | ProteinID:AAC67511.1 | ProteinID:AAC67512.1 |
| ProteinID:AAC67513.1 | ProteinID:AAC67514.1 | ProteinID:AAC67515.1 | ProteinID:AAC67516.1 | ProteinID:AAC67517.1 | ProteinID:AAC67518.1 |
| ProteinID:AAC67519.1 | ProteinID:AAG50679.1 | EMBL:AB493477 | ProteinID:AEE30674.1 | ArrayExpress:AT1G26310 | EnsemblPlantsGene:AT1G26310 |
| RefSeq:AT1G26310 | TAIR:AT1G26310 | RefSeq:AT1G26310-TAIR-G | EnsemblPlants:AT1G26310.1 | TAIR:AT1G26310.1 | Symbol:CAL |
| ncoils:Coil | GO:GO:0000003 | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009911 | GO:GO:0009987 |
| GO:GO:0010582 | GO:GO:0030154 | GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR002487 |
| InterPro:IPR036879 | InterPro:MADS_MEF2-like | RefSeq:NP_564243.1 | PFAM:PF00319 | PFAM:PF01486 | PO:PO:0000037 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020100 | PO:PO:0025022 | PRINTS:PR00404 | ScanProsite:PS00350 |
| PFscan:PS50066 | PFscan:PS51297 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF244 | UniProt:Q39081 | SMART:SM00432 |
| SUPFAM:SSF55455 | InterPro:TF_Kbox | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI0000162EC7 | : |
Description
CALTranscription factor CAULIFLOWER [Source:UniProtKB/Swiss-Prot;Acc:Q39081]
Coordinates
chr1:-:9099994..9103644
Molecular Weight (calculated)
30189.2 Da
IEP (calculated)
8.305
GRAVY (calculated)
-0.873
Length
255 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGRVELKR IENKINRQVT FSKRRTGLLK KAQEISVLCD AEVSLIVFSH KGKLFEYSSE SCMEKVLERY ERYSYAERQL IAPDSHVNAQ TNWSMEYSRL
101: KAKIELLERN QRHYLGEELE PMSLKDLQNL EQQLETALKH IRSRKNQLMN ESLNHLQRKE KEIQEENSML TKQIKERENI LRTKQTQCEQ LNRSVDDVPQ
201: PQPFQHPHLY MIAHQTSPFL NMGGLYQEED QTAMRRNNLD LTLEPIYNYL GCYAA
101: KAKIELLERN QRHYLGEELE PMSLKDLQNL EQQLETALKH IRSRKNQLMN ESLNHLQRKE KEIQEENSML TKQIKERENI LRTKQTQCEQ LNRSVDDVPQ
201: PQPFQHPHLY MIAHQTSPFL NMGGLYQEED QTAMRRNNLD LTLEPIYNYL GCYAA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.