Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025411.1-P | Field mustard | nucleus | 60.64 | 85.8 |
| CDY19977 | Canola | nucleus | 33.73 | 82.35 |
| Bra036201.1-P | Field mustard | nucleus | 81.53 | 81.85 |
| CDY00082 | Canola | nucleus | 80.72 | 81.05 |
| CDX86353 | Canola | nucleus | 79.52 | 79.52 |
| CDY45899 | Canola | nucleus | 79.12 | 79.12 |
| CDX85287 | Canola | nucleus | 56.22 | 74.87 |
| CDY35780 | Canola | nucleus | 55.42 | 70.05 |
| VIT_14s0083g01030.t01 | Wine grape | nucleus | 51.0 | 51.42 |
| Solyc02g089210.2.1 | Tomato | nucleus | 49.0 | 48.8 |
| PGSC0003DMT400068325 | Potato | nucleus | 45.78 | 48.72 |
| GSMUA_Achr6P00050_001 | Banana | nucleus | 46.99 | 48.35 |
| PGSC0003DMT400003485 | Potato | nucleus | 46.99 | 47.37 |
| AT5G60910.1 | Thale cress | nucleus | 45.78 | 47.11 |
| Solyc02g065730.1.1 | Tomato | nucleus | 44.18 | 47.01 |
| GSMUA_Achr2P13650_001 | Banana | nucleus | 46.18 | 46.75 |
| AT1G26310.1 | Thale cress | nucleus | 47.79 | 46.67 |
| GSMUA_Achr4P23540_001 | Banana | nucleus | 46.18 | 46.37 |
| KRH18331 | Soybean | nucleus | 45.38 | 46.31 |
| KRG93701 | Soybean | nucleus | 44.98 | 45.9 |
| AT1G69120.1 | Thale cress | nucleus | 46.99 | 45.7 |
| GSMUA_Achr7P00460_001 | Banana | nucleus | 45.38 | 45.2 |
| EER97510 | Sorghum | nucleus | 45.78 | 45.06 |
| GSMUA_Achr3P30440_001 | Banana | nucleus | 41.37 | 44.78 |
| Zm00001d022088_P004 | Maize | nucleus | 45.78 | 44.19 |
| Os07t0605200-01 | Rice | nucleus | 44.18 | 44.18 |
| EER90862 | Sorghum | nucleus | 43.37 | 44.08 |
| KRH45099 | Soybean | nucleus | 43.78 | 43.95 |
| TraesCS5A01G391700.1 | Wheat | nucleus | 42.57 | 43.44 |
| GSMUA_Achr8P04330_001 | Banana | nucleus | 42.17 | 42.86 |
| Os03t0752800-02 | Rice | nucleus | 42.17 | 42.68 |
| TraesCS5B01G396600.2 | Wheat | nucleus | 42.57 | 42.23 |
| GSMUA_Achr3P02280_001 | Banana | nucleus | 44.58 | 42.21 |
| TraesCS5D01G401500.1 | Wheat | cytosol, nucleus | 42.97 | 42.13 |
| TraesCS2A01G174300.3 | Wheat | nucleus | 44.98 | 41.95 |
| TraesCS2B01G200800.1 | Wheat | nucleus | 44.98 | 41.95 |
| TraesCS2D01G181400.3 | Wheat | nucleus | 44.98 | 41.95 |
| Zm00001d018667_P003 | Maize | nucleus | 45.38 | 41.7 |
| Os07t0108900-02 | Rice | nucleus | 44.18 | 41.2 |
| EER95753 | Sorghum | nucleus | 44.58 | 41.11 |
| TraesCS2D01G262700.1 | Wheat | nucleus | 44.58 | 40.96 |
| TraesCS2B01G281000.1 | Wheat | nucleus | 44.58 | 40.51 |
| TraesCS2A01G261200.2 | Wheat | nucleus | 44.58 | 40.51 |
| GSMUA_Achr10P... | Banana | nucleus | 45.78 | 40.0 |
| KRH01382 | Soybean | nucleus | 40.56 | 39.92 |
| Zm00001d013259_P002 | Maize | nucleus | 43.78 | 39.07 |
| Os12t0501700-00 | Rice | nucleus | 36.55 | 39.06 |
| AT1G24260.2 | Thale cress | nucleus | 38.15 | 37.85 |
| GSMUA_Achr3P25280_001 | Banana | nucleus | 40.16 | 37.59 |
| AT2G45650.1 | Thale cress | nucleus | 37.75 | 37.3 |
| Zm00001d007949_P001 | Maize | nucleus | 44.58 | 36.39 |
| KXG23502 | Sorghum | nucleus | 32.53 | 36.32 |
| HORVU2Hr1G063800.7 | Barley | nucleus, plastid | 44.58 | 36.27 |
| Zm00001d034045_P003 | Maize | nucleus | 42.17 | 36.08 |
| AT3G02310.1 | Thale cress | nucleus | 35.34 | 35.2 |
| AT5G15800.2 | Thale cress | nucleus | 36.14 | 34.35 |
| Zm00001d023736_P001 | Maize | nucleus | 35.34 | 34.24 |
| HORVU5Hr1G095630.3 | Barley | nucleus, plastid | 42.17 | 34.2 |
| AT3G61120.1 | Thale cress | nucleus | 33.33 | 34.02 |
| AT2G03710.1 | Thale cress | nucleus | 34.14 | 32.95 |
| AT2G14210.2 | Thale cress | nucleus | 30.92 | 32.77 |
| AT4G37940.1 | Thale cress | nucleus | 28.11 | 30.7 |
| AT3G57230.1 | Thale cress | nucleus | 29.32 | 30.42 |
| AT2G42830.2 | Thale cress | nucleus | 29.32 | 29.44 |
| AT4G18960.1 | Thale cress | nucleus | 29.72 | 29.37 |
| AT2G22630.2 | Thale cress | nucleus | 25.7 | 28.19 |
| AT3G58780.4 | Thale cress | nucleus | 30.12 | 26.69 |
| AT4G09960.4 | Thale cress | nucleus | 30.12 | 22.8 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EntrezGene:822726 | ProteinID:AEE77628.1 | Symbol:AGL79 | ArrayExpress:AT3G30260 |
| EnsemblPlantsGene:AT3G30260 | RefSeq:AT3G30260 | TAIR:AT3G30260 | RefSeq:AT3G30260-TAIR-G | EnsemblPlants:AT3G30260.1 | TAIR:AT3G30260.1 |
| EMBL:AY141238 | ncoils:Coil | GO:GO:0000003 | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009653 | GO:GO:0009791 | GO:GO:0009987 |
| GO:GO:0010223 | GO:GO:0010228 | GO:GO:0010311 | GO:GO:0045944 | GO:GO:0046983 | GO:GO:0048366 |
| InterPro:IPR002100 | InterPro:IPR002487 | InterPro:IPR036879 | InterPro:MADS_MEF2-like | RefSeq:NP_189645.2 | PFAM:PF00319 |
| PFAM:PF01486 | PO:PO:0009005 | PRINTS:PR00404 | ScanProsite:PS00350 | PFscan:PS50066 | PFscan:PS51297 |
| PANTHER:PTHR11945 | PANTHER:PTHR11945:SF244 | UniProt:Q7X9H6 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_Kbox |
| InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI00001B24E6 | SEG:seg | : | : |
Description
AGL79AGAMOUS-like 79 [Source:UniProtKB/TrEMBL;Acc:Q7X9H6]
Coordinates
chr3:+:11908870..11913166
Molecular Weight (calculated)
28076.8 Da
IEP (calculated)
10.163
GRAVY (calculated)
-0.687
Length
249 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGRVQLRR IENKIRRQVT FSKRRTGLVK KAQEISVLCD AEVALIVFSP KGKLFEYSAG SSMERILDRY ERSAYAGQDI PTPNLDSQGE CSTECSKLLR
101: MIDVLQRSLR HLRGEEVDGL SIRDLQGVEM QLDTALKKTR SRKNQLMVES IAQLQKKEKE LKELKKQLTK KAGEREDFQT QNLSHDLASL ATPPFESPHE
201: LRRTISPPPP PLSSGDTSQR DGVGEVAAGT LIRRTNATLP HWMPQLTGE
101: MIDVLQRSLR HLRGEEVDGL SIRDLQGVEM QLDTALKKTR SRKNQLMVES IAQLQKKEKE LKELKKQLTK KAGEREDFQT QNLSHDLASL ATPPFESPHE
201: LRRTISPPPP PLSSGDTSQR DGVGEVAAGT LIRRTNATLP HWMPQLTGE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.