Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH18331 | Soybean | nucleus | 93.44 | 93.44 |
| KRH75125 | Soybean | nucleus | 20.08 | 80.33 |
| KRH45099 | Soybean | nucleus | 69.26 | 68.15 |
| CDY19977 | Canola | nucleus | 26.64 | 63.73 |
| KRH64836 | Soybean | nucleus | 15.57 | 63.33 |
| KRH01382 | Soybean | nucleus | 64.75 | 62.45 |
| Bra025411.1-P | Field mustard | nucleus | 42.62 | 59.09 |
| VIT_14s0083g01030.t01 | Wine grape | nucleus | 58.61 | 57.89 |
| KRH03173 | Soybean | nucleus | 52.46 | 53.56 |
| PGSC0003DMT400068325 | Potato | nucleus | 50.41 | 52.56 |
| KRH56774 | Soybean | nucleus | 52.05 | 52.05 |
| PGSC0003DMT400003485 | Potato | nucleus | 51.64 | 51.01 |
| KRH07467 | Soybean | nucleus | 49.18 | 50.85 |
| Solyc02g065730.1.1 | Tomato | nucleus | 48.36 | 50.43 |
| GSMUA_Achr2P13650_001 | Banana | nucleus | 50.82 | 50.41 |
| Solyc02g089210.2.1 | Tomato | nucleus | 51.64 | 50.4 |
| KRH45412 | Soybean | nucleus | 48.36 | 50.0 |
| KRG97386 | Soybean | nucleus | 29.51 | 50.0 |
| KRH11093 | Soybean | nucleus | 15.16 | 49.33 |
| GSMUA_Achr6P00050_001 | Banana | nucleus | 48.77 | 49.17 |
| GSMUA_Achr7P00460_001 | Banana | nucleus | 50.0 | 48.8 |
| KRH54740 | Soybean | nucleus | 48.77 | 48.77 |
| KRH63171 | Soybean | nucleus | 48.77 | 48.77 |
| TraesCS5A01G391700.1 | Wheat | nucleus | 48.36 | 48.36 |
| KRH70974 | Soybean | nucleus | 47.95 | 48.15 |
| GSMUA_Achr4P23540_001 | Banana | nucleus | 48.77 | 47.98 |
| EER90862 | Sorghum | nucleus | 47.95 | 47.76 |
| GSMUA_Achr8P04330_001 | Banana | nucleus | 47.95 | 47.76 |
| KRH40560 | Soybean | nucleus | 29.92 | 47.1 |
| KRH66116 | Soybean | nucleus, plastid | 15.16 | 46.84 |
| CDY00082 | Canola | nucleus | 47.54 | 46.77 |
| TraesCS5B01G396600.2 | Wheat | nucleus | 47.95 | 46.61 |
| CDX86353 | Canola | nucleus | 47.13 | 46.18 |
| TraesCS5D01G401500.1 | Wheat | cytosol, nucleus | 47.95 | 46.06 |
| Bra036201.1-P | Field mustard | nucleus | 46.72 | 45.97 |
| EER97510 | Sorghum | nucleus | 47.13 | 45.45 |
| Os03t0752800-02 | Rice | nucleus | 45.49 | 45.12 |
| AT3G30260.1 | Thale cress | nucleus | 45.9 | 44.98 |
| Os07t0605200-01 | Rice | nucleus | 45.9 | 44.98 |
| Zm00001d022088_P004 | Maize | nucleus | 46.72 | 44.19 |
| CDY45899 | Canola | nucleus | 44.67 | 43.78 |
| GSMUA_Achr3P30440_001 | Banana | nucleus | 40.98 | 43.48 |
| GSMUA_Achr3P02280_001 | Banana | nucleus | 46.31 | 42.97 |
| Zm00001d013259_P002 | Maize | nucleus | 48.36 | 42.29 |
| TraesCS2D01G262700.1 | Wheat | nucleus | 46.72 | 42.07 |
| TraesCS2B01G281000.1 | Wheat | nucleus | 47.13 | 41.97 |
| TraesCS2B01G200800.1 | Wheat | nucleus | 45.9 | 41.95 |
| TraesCS2D01G181400.3 | Wheat | nucleus | 45.9 | 41.95 |
| Zm00001d018667_P003 | Maize | nucleus | 46.31 | 41.7 |
| TraesCS2A01G261200.2 | Wheat | nucleus | 46.72 | 41.61 |
| Os07t0108900-02 | Rice | nucleus | 45.49 | 41.57 |
| TraesCS2A01G174300.3 | Wheat | nucleus | 45.49 | 41.57 |
| EER95753 | Sorghum | nucleus | 45.08 | 40.74 |
| GSMUA_Achr10P... | Banana | nucleus | 47.13 | 40.35 |
| Os12t0501700-00 | Rice | nucleus | 38.52 | 40.34 |
| GSMUA_Achr3P25280_001 | Banana | nucleus | 43.03 | 39.47 |
| KRH14461 | Soybean | nucleus | 16.8 | 39.42 |
| Zm00001d034045_P003 | Maize | nucleus | 46.72 | 39.18 |
| KRH03170 | Soybean | nucleus | 38.93 | 39.09 |
| KRH56775 | Soybean | nucleus | 38.11 | 38.27 |
| KXG23502 | Sorghum | nucleus | 34.84 | 38.12 |
| KRH45097 | Soybean | nucleus | 38.93 | 37.85 |
| KRH58800 | Soybean | nucleus | 37.7 | 37.7 |
| KRH42695 | Soybean | nucleus | 37.7 | 37.7 |
| KRH65193 | Soybean | nucleus | 37.7 | 37.55 |
| HORVU5Hr1G095630.3 | Barley | nucleus, plastid | 47.13 | 37.46 |
| KRH18339 | Soybean | nucleus | 38.11 | 37.35 |
| KRG93698 | Soybean | nucleus | 38.11 | 37.35 |
| KRH01380 | Soybean | nucleus | 38.93 | 37.25 |
| KRH48304 | Soybean | nucleus | 37.3 | 37.14 |
| Zm00001d007949_P001 | Maize | nucleus | 46.31 | 37.05 |
| HORVU2Hr1G063800.7 | Barley | nucleus, plastid | 46.31 | 36.93 |
| KRH75123 | Soybean | nucleus | 36.89 | 36.59 |
| KRH70973 | Soybean | nucleus | 36.48 | 36.48 |
| KRH31527 | Soybean | nucleus | 36.07 | 36.21 |
| KRH00622 | Soybean | nucleus | 35.25 | 35.98 |
| KRH09173 | Soybean | nucleus | 34.02 | 35.17 |
| Zm00001d023736_P001 | Maize | nucleus | 36.48 | 34.63 |
| KRH38649 | Soybean | nucleus | 34.02 | 34.02 |
| CDX85287 | Canola | nucleus | 25.82 | 33.69 |
| KRH39494 | Soybean | nucleus | 30.33 | 33.48 |
| KRH56460 | Soybean | nucleus | 29.92 | 32.88 |
| KRH74451 | Soybean | nucleus | 29.92 | 32.88 |
| KRH42051 | Soybean | nucleus | 29.51 | 32.58 |
| KRH35403 | Soybean | nucleus | 30.33 | 31.9 |
| KRG91419 | Soybean | nucleus | 29.92 | 31.74 |
| KRH10635 | Soybean | nucleus | 31.97 | 31.33 |
| KRH21150 | Soybean | nucleus | 30.74 | 30.86 |
| KRH42930 | Soybean | nucleus | 30.33 | 30.45 |
| KRH16883 | Soybean | nucleus | 29.1 | 29.71 |
| KRH73684 | Soybean | nucleus | 29.92 | 29.67 |
| KRG98899 | Soybean | nucleus | 29.92 | 29.67 |
| KRH59043 | Soybean | nucleus | 29.51 | 29.63 |
| KRH42047 | Soybean | nucleus | 29.1 | 29.46 |
| CDY35780 | Canola | nucleus | 23.77 | 29.44 |
| KRH46066 | Soybean | nucleus | 29.51 | 29.15 |
| KRH72490 | Soybean | nucleus | 27.87 | 27.98 |
| KRH11095 | Soybean | nucleus | 15.98 | 23.35 |
| KRH64830 | Soybean | nucleus | 13.93 | 21.12 |
| KRH21716 | Soybean | nucleus | 16.39 | 20.94 |
Protein Annotations
| EntrezGene:100820188 | MapMan:15.5.14 | Gene3D:3.40.1810.10 | UniProt:A0A0R0EIM6 | EMBL:ACUP02011614 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_19G034600 | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR002487 | InterPro:IPR036879 |
| EnsemblPlants:KRG93701 | ProteinID:KRG93701 | ProteinID:KRG93701.1 | InterPro:MADS_MEF2-like | PFAM:PF00319 | PFAM:PF01486 |
| PRINTS:PR00404 | ScanProsite:PS00350 | PFscan:PS50066 | PFscan:PS51297 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF241 |
| SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_Kbox | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI0001E24230 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr19:+:4531976..4549417
Molecular Weight (calculated)
27960.8 Da
IEP (calculated)
9.775
GRAVY (calculated)
-0.647
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGRVQLKQ IENKISRQVT FSKRRTGLRK KANEISVLCD AQVALIVFNA KGKLFEYSSE SSMENVLERY ERHTHIGKLV GDGDESQGNW SLQCFKLTGK
101: VEVLERNLRN FVGEDLDPLN LRELQSLEHQ LETAIKRIRT RKNQVMNESI SDLQKKARQL QEQNGILTKK IKEKGKEVVE RPHCGPETLG LTCPPELQRQ
201: QRVFPSLTLC ETLQAGHLEE VVEARTVPTA STHIPPWMLH PFTR
101: VEVLERNLRN FVGEDLDPLN LRELQSLEHQ LETAIKRIRT RKNQVMNESI SDLQKKARQL QEQNGILTKK IKEKGKEVVE RPHCGPETLG LTCPPELQRQ
201: QRVFPSLTLC ETLQAGHLEE VVEARTVPTA STHIPPWMLH PFTR
001: MGRGRVQLRR IENKIRRQVT FSKRRTGLVK KAQEISVLCD AEVALIVFSP KGKLFEYSAG SSMERILDRY ERSAYAGQDI PTPNLDSQGE CSTECSKLLR
101: MIDVLQRSLR HLRGEEVDGL SIRDLQGVEM QLDTALKKTR SRKNQLMVES IAQLQKKEKE LKELKKQLTK KAGEREDFQT QNLSHDLASL ATPPFESPHE
201: LRRTISPPPP PLSSGDTSQR DGVGEVAAGT LIRRTNATLP HWMPQLTGE
101: MIDVLQRSLR HLRGEEVDGL SIRDLQGVEM QLDTALKKTR SRKNQLMVES IAQLQKKEKE LKELKKQLTK KAGEREDFQT QNLSHDLASL ATPPFESPHE
201: LRRTISPPPP PLSSGDTSQR DGVGEVAAGT LIRRTNATLP HWMPQLTGE
Arabidopsis Description
AGL79AGAMOUS-like 79 [Source:UniProtKB/TrEMBL;Acc:Q7X9H6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.