Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH56774 | Soybean | nucleus | 91.21 | 89.34 |
| KRH75125 | Soybean | nucleus | 21.34 | 83.61 |
| KRH64836 | Soybean | nucleus | 17.57 | 70.0 |
| AT5G60910.1 | Thale cress | nucleus | 64.44 | 63.64 |
| Bra029347.1-P | Field mustard | nucleus | 63.18 | 62.92 |
| CDY42841 | Canola | nucleus | 63.18 | 62.92 |
| Bra035952.1-P | Field mustard | nucleus | 62.76 | 62.24 |
| CDY16832 | Canola | nucleus | 62.76 | 62.24 |
| CDY02185 | Canola | nucleus | 62.34 | 61.83 |
| KRH54740 | Soybean | nucleus | 62.76 | 61.48 |
| Bra012997.1-P | Field mustard | nucleus | 61.92 | 61.41 |
| CDY58690 | Canola | nucleus | 61.92 | 61.41 |
| CDY47002 | Canola | nucleus | 61.92 | 61.41 |
| KRH63171 | Soybean | nucleus | 61.51 | 60.25 |
| KRH07467 | Soybean | nucleus | 56.49 | 57.2 |
| VIT_17s0000g04990.t01 | Wine grape | nucleus | 58.16 | 57.2 |
| KRH45412 | Soybean | nucleus | 56.07 | 56.78 |
| KRG97386 | Soybean | nucleus | 33.89 | 56.25 |
| KRH70974 | Soybean | nucleus | 55.65 | 54.73 |
| KRH11093 | Soybean | nucleus | 17.15 | 54.67 |
| TraesCS5A01G391700.1 | Wheat | nucleus | 54.81 | 53.69 |
| GSMUA_Achr2P13650_001 | Banana | nucleus | 54.39 | 52.85 |
| KRG93701 | Soybean | nucleus | 53.56 | 52.46 |
| EER90862 | Sorghum | nucleus | 53.56 | 52.24 |
| TraesCS5B01G396600.2 | Wheat | nucleus | 54.81 | 52.19 |
| KRH18331 | Soybean | nucleus | 53.14 | 52.05 |
| KRH45099 | Soybean | nucleus | 53.97 | 52.02 |
| GSMUA_Achr7P00460_001 | Banana | nucleus | 54.39 | 52.0 |
| Os03t0752800-02 | Rice | nucleus | 53.14 | 51.63 |
| GSMUA_Achr4P23540_001 | Banana | nucleus | 53.14 | 51.21 |
| TraesCS5D01G401500.1 | Wheat | cytosol, nucleus | 54.39 | 51.18 |
| GSMUA_Achr6P00050_001 | Banana | nucleus | 51.46 | 50.83 |
| EER97510 | Sorghum | nucleus | 51.88 | 49.01 |
| GSMUA_Achr8P04330_001 | Banana | nucleus | 49.79 | 48.57 |
| Zm00001d022088_P004 | Maize | nucleus | 51.88 | 48.06 |
| TraesCS2D01G262700.1 | Wheat | nucleus | 54.39 | 47.97 |
| GSMUA_Achr3P30440_001 | Banana | nucleus | 46.03 | 47.83 |
| KRH01382 | Soybean | nucleus | 50.63 | 47.83 |
| TraesCS2A01G261200.2 | Wheat | nucleus | 54.39 | 47.45 |
| TraesCS2B01G281000.1 | Wheat | nucleus | 54.39 | 47.45 |
| Os07t0605200-01 | Rice | nucleus | 49.37 | 47.39 |
| Zm00001d018667_P003 | Maize | nucleus | 53.56 | 47.23 |
| KRH40560 | Soybean | nucleus | 30.54 | 47.1 |
| EER95753 | Sorghum | nucleus | 53.14 | 47.04 |
| Os07t0108900-02 | Rice | nucleus | 52.3 | 46.82 |
| GSMUA_Achr3P02280_001 | Banana | nucleus | 50.63 | 46.01 |
| Zm00001d013259_P002 | Maize | nucleus | 53.14 | 45.52 |
| TraesCS2B01G200800.1 | Wheat | nucleus | 50.21 | 44.94 |
| TraesCS2D01G181400.3 | Wheat | nucleus | 50.21 | 44.94 |
| TraesCS2A01G174300.3 | Wheat | nucleus | 49.79 | 44.57 |
| GSMUA_Achr3P25280_001 | Banana | nucleus | 48.95 | 43.98 |
| GSMUA_Achr10P... | Banana | nucleus | 52.3 | 43.86 |
| Zm00001d034045_P003 | Maize | nucleus | 52.3 | 42.96 |
| KRH42695 | Soybean | nucleus | 43.1 | 42.21 |
| KRH18339 | Soybean | nucleus | 43.93 | 42.17 |
| KRG93698 | Soybean | nucleus | 43.93 | 42.17 |
| HORVU2Hr1G063800.7 | Barley | nucleus, plastid | 53.97 | 42.16 |
| KRH56775 | Soybean | nucleus | 42.68 | 41.98 |
| KRH03170 | Soybean | nucleus | 42.68 | 41.98 |
| KRH45097 | Soybean | nucleus | 43.93 | 41.83 |
| KRH58800 | Soybean | nucleus | 42.68 | 41.8 |
| HORVU5Hr1G095630.3 | Barley | nucleus, plastid | 53.56 | 41.69 |
| Zm00001d007949_P001 | Maize | nucleus | 53.14 | 41.64 |
| KRH31527 | Soybean | nucleus | 42.26 | 41.56 |
| KRH01380 | Soybean | nucleus | 43.93 | 41.18 |
| KXG23502 | Sorghum | nucleus | 38.08 | 40.81 |
| KRH75123 | Soybean | nucleus | 41.84 | 40.65 |
| KRH70973 | Soybean | nucleus | 41.42 | 40.57 |
| KRH14461 | Soybean | nucleus | 17.57 | 40.38 |
| Os12t0501700-00 | Rice | nucleus | 38.49 | 39.48 |
| KRH65193 | Soybean | nucleus | 39.75 | 38.78 |
| KRH48304 | Soybean | nucleus | 39.75 | 38.78 |
| KRH09173 | Soybean | nucleus | 36.4 | 36.86 |
| Zm00001d023736_P001 | Maize | nucleus | 39.33 | 36.58 |
| KRG91419 | Soybean | nucleus | 34.73 | 36.09 |
| KRH38649 | Soybean | nucleus | 36.82 | 36.07 |
| KRH00622 | Soybean | nucleus | 35.98 | 35.98 |
| KRH35403 | Soybean | nucleus | 34.31 | 35.34 |
| KRH56460 | Soybean | nucleus | 31.38 | 33.78 |
| KRH42051 | Soybean | nucleus | 30.96 | 33.48 |
| KRH21150 | Soybean | nucleus | 33.89 | 33.33 |
| KRH74451 | Soybean | nucleus | 30.54 | 32.88 |
| KRH39494 | Soybean | nucleus | 30.13 | 32.58 |
| KRH10635 | Soybean | nucleus | 33.89 | 32.53 |
| KRH42047 | Soybean | nucleus | 32.64 | 32.37 |
| KRH42930 | Soybean | nucleus | 32.64 | 32.1 |
| KRH59043 | Soybean | nucleus | 32.22 | 31.69 |
| KRG98899 | Soybean | nucleus | 31.8 | 30.89 |
| KRH73684 | Soybean | nucleus | 31.8 | 30.89 |
| KRH46066 | Soybean | nucleus | 31.8 | 30.77 |
| KRH16883 | Soybean | nucleus | 30.54 | 30.54 |
| KRH72490 | Soybean | nucleus | 29.29 | 28.81 |
| KRH11095 | Soybean | nucleus | 16.32 | 23.35 |
| KRH66116 | Soybean | nucleus, plastid | 7.11 | 21.52 |
| KRH21716 | Soybean | nucleus | 16.74 | 20.94 |
| KRH64830 | Soybean | nucleus | 13.81 | 20.5 |
Protein Annotations
| EntrezGene:100805348 | MapMan:15.5.14 | Gene3D:3.40.1810.10 | EMBL:ACUP02010335 | ncoils:Coil | EnsemblPlantsGene:GLYMA_17G081200 |
| GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0045944 | GO:GO:0046983 | UniProt:I1MT91 | InterPro:IPR002100 | InterPro:IPR002487 | InterPro:IPR036879 |
| EnsemblPlants:KRH03173 | ProteinID:KRH03173 | ProteinID:KRH03173.1 | InterPro:MADS_MEF2-like | PFAM:PF00319 | PFAM:PF01486 |
| PRINTS:PR00404 | ScanProsite:PS00350 | PFscan:PS50066 | PFscan:PS51297 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF155 |
| SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_Kbox | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI000233F07F |
Description
hypothetical protein
Coordinates
chr17:+:6312563..6321583
Molecular Weight (calculated)
27464.9 Da
IEP (calculated)
9.604
GRAVY (calculated)
-0.835
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGRVDLKR IENKINRQVT FSKRRSGLLK KAREISVLCD ADVALIVFST KGKLFDYSNE PCMKRILERY ERYSYAERQL AGDDQAPNEN WVIEHEKLKA
101: RVEVLQRNQR NFMGEDLDSL NLRGLQSLEQ QLDSALKLIR SRKNQAMNES ISALQKKDKS LREHNNLLSK KIKDKEKELA PQEQDGLQNN MDVTSVLVTQ
201: PPESLTIGGF PEAKCNEETP TSSRPKTILP PWMPLPTNE
101: RVEVLQRNQR NFMGEDLDSL NLRGLQSLEQ QLDSALKLIR SRKNQAMNES ISALQKKDKS LREHNNLLSK KIKDKEKELA PQEQDGLQNN MDVTSVLVTQ
201: PPESLTIGGF PEAKCNEETP TSSRPKTILP PWMPLPTNE
001: MGRGRVQLKR IENKINRQVT FSKRRSGLLK KAHEISVLCD AEVALIVFSS KGKLFEYSTD SCMERILERY DRYLYSDKQL VGRDVSQSEN WVLEHAKLKA
101: RVEVLEKNKR NFMGEDLDSL SLKELQSLEH QLDAAIKSIR SRKNQAMFES ISALQKKDKA LQDHNNSLLK KIKEREKKTG QQEGQLVQCS NSSSVLLPQY
201: CVTSSRDGFV ERVGGENGGA SSLTEPNSLL PAWMLRPTTT NE
101: RVEVLEKNKR NFMGEDLDSL SLKELQSLEH QLDAAIKSIR SRKNQAMFES ISALQKKDKA LQDHNNSLLK KIKEREKKTG QQEGQLVQCS NSSSVLLPQY
201: CVTSSRDGFV ERVGGENGGA SSLTEPNSLL PAWMLRPTTT NE
Arabidopsis Description
AGL8Agamous-like MADS-box protein AGL8 [Source:UniProtKB/Swiss-Prot;Acc:Q38876]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.