Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH75125 | Soybean | nucleus | 20.48 | 83.61 |
| EER97510 | Sorghum | nucleus | 78.31 | 77.08 |
| Zm00001d022088_P004 | Maize | nucleus | 76.31 | 73.64 |
| TraesCS2D01G181400.3 | Wheat | nucleus | 77.51 | 72.28 |
| TraesCS2B01G200800.1 | Wheat | nucleus | 77.51 | 72.28 |
| TraesCS2A01G174300.3 | Wheat | nucleus | 77.11 | 71.91 |
| CDY19977 | Canola | nucleus | 26.91 | 65.69 |
| Bra025411.1-P | Field mustard | nucleus | 42.17 | 59.66 |
| Bra004361.1-P | Field mustard | nucleus | 42.57 | 56.08 |
| VIT_01s0011g00100.t01 | Wine grape | nucleus | 51.81 | 53.53 |
| Os03t0752800-02 | Rice | nucleus | 52.61 | 53.25 |
| Solyc03g114830.2.1 | Tomato | nucleus | 52.61 | 53.04 |
| KRH63171 | Soybean | nucleus | 51.41 | 52.46 |
| VIT_14s0083g01030.t01 | Wine grape | nucleus | 51.81 | 52.23 |
| PGSC0003DMT400063313 | Potato | nucleus | 51.81 | 52.02 |
| KRH54740 | Soybean | nucleus | 50.6 | 51.64 |
| VIT_17s0000g04990.t01 | Wine grape | nucleus | 49.8 | 51.03 |
| Solyc02g089210.2.1 | Tomato | nucleus | 51.0 | 50.8 |
| Solyc06g069430.2.1 | Tomato | nucleus | 49.8 | 50.61 |
| CDY34564 | Canola | nucleus | 44.18 | 50.46 |
| KRH07467 | Soybean | nucleus | 47.79 | 50.42 |
| PGSC0003DMT400003485 | Potato | nucleus | 49.4 | 49.8 |
| CDY36077 | Canola | nucleus | 44.18 | 49.77 |
| PGSC0003DMT400010451 | Potato | nucleus | 49.8 | 49.6 |
| PGSC0003DMT400072888 | Potato | nucleus | 48.59 | 49.59 |
| Solyc05g056620.1.1 | Tomato | nucleus | 48.59 | 49.59 |
| KRH45412 | Soybean | nucleus | 46.99 | 49.58 |
| Bra035952.1-P | Field mustard | nucleus | 47.79 | 49.38 |
| CDY16832 | Canola | nucleus | 47.79 | 49.38 |
| KRH03173 | Soybean | nucleus | 47.39 | 49.37 |
| AT5G60910.1 | Thale cress | nucleus | 47.79 | 49.17 |
| Bra029347.1-P | Field mustard | nucleus | 46.99 | 48.75 |
| CDY42841 | Canola | nucleus | 46.99 | 48.75 |
| PGSC0003DMT400068325 | Potato | nucleus | 45.38 | 48.29 |
| CDY58690 | Canola | nucleus | 46.59 | 48.13 |
| GSMUA_Achr3P02280_001 | Banana | nucleus | 50.6 | 47.91 |
| CDY47002 | Canola | nucleus | 46.18 | 47.72 |
| Os07t0108900-02 | Rice | nucleus | 51.0 | 47.57 |
| KRH56774 | Soybean | nucleus | 46.59 | 47.54 |
| Bra012997.1-P | Field mustard | nucleus | 45.78 | 47.3 |
| CDY02185 | Canola | nucleus | 45.78 | 47.3 |
| Bra038326.1-P | Field mustard | nucleus | 48.59 | 47.27 |
| AT1G69120.1 | Thale cress | nucleus | 48.59 | 47.27 |
| CDY65811 | Canola | nucleus | 48.59 | 47.27 |
| Solyc02g065730.1.1 | Tomato | nucleus | 44.18 | 47.01 |
| KRH70974 | Soybean | nucleus | 45.78 | 46.91 |
| CDX95960 | Canola | nucleus | 47.79 | 46.48 |
| CDY00082 | Canola | nucleus | 46.18 | 46.37 |
| KRH45099 | Soybean | nucleus | 46.18 | 46.37 |
| CDY33554 | Canola | nucleus | 47.39 | 46.09 |
| Bra036201.1-P | Field mustard | nucleus | 45.78 | 45.97 |
| Os08t0431900-00 | Rice | nucleus | 29.32 | 45.91 |
| KRG93701 | Soybean | nucleus | 44.98 | 45.9 |
| CDX86353 | Canola | nucleus | 45.78 | 45.78 |
| GSMUA_Achr10P... | Banana | nucleus | 51.81 | 45.26 |
| Os06t0347700-00 | Rice | nucleus | 26.51 | 44.9 |
| AT1G26310.1 | Thale cress | nucleus | 45.78 | 44.71 |
| CDY45899 | Canola | nucleus | 44.58 | 44.58 |
| Bra011021.1-P | Field mustard | nucleus | 45.38 | 44.49 |
| AT3G30260.1 | Thale cress | nucleus | 44.18 | 44.18 |
| Os02t0682200-01 | Rice | nucleus | 43.78 | 43.6 |
| Bra004007.1-P | Field mustard | nucleus | 47.39 | 43.54 |
| KRH18331 | Soybean | nucleus | 42.57 | 43.44 |
| CDY04265 | Canola | nucleus | 48.19 | 43.32 |
| Os06t0162800-01 | Rice | nucleus | 38.96 | 43.11 |
| KRH01382 | Soybean | nucleus | 43.78 | 43.08 |
| Os08t0531700-01 | Rice | nucleus | 42.17 | 42.17 |
| CDY07357 | Canola | nucleus | 48.59 | 41.87 |
| Os03t0753100-01 | Rice | nucleus | 40.16 | 41.84 |
| Os09t0507200-01 | Rice | nucleus | 41.37 | 41.53 |
| Os04t0580700-01 | Rice | nucleus | 42.17 | 41.34 |
| Os12t0501700-00 | Rice | nucleus | 38.15 | 40.77 |
| Os03t0215400-01 | Rice | nucleus | 39.76 | 38.52 |
| Os04t0304400-01 | Rice | nucleus | 34.54 | 37.89 |
| Os02t0731200-01 | Rice | nucleus | 34.14 | 35.27 |
| Os02t0579600-00 | Rice | nucleus | 33.73 | 35.0 |
| CDX85287 | Canola | nucleus | 25.3 | 33.69 |
| Os01t0886200-01 | Rice | nucleus | 33.33 | 31.32 |
| CDY35780 | Canola | nucleus | 23.69 | 29.95 |
| Os05t0203800-02 | Rice | nucleus | 32.53 | 29.78 |
| Os12t0207000-01 | Rice | nucleus | 31.73 | 29.26 |
| Os01t0201700-02 | Rice | nucleus | 32.13 | 28.99 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EntrezGene:4343851 | EMBL:AF091458 | EMBL:AJ011675 | ProteinID:BAC83880.1 |
| ProteinID:BAF22139.1 | ProteinID:BAT02559.1 | ncoils:Coil | ProteinID:EEE67551.1 | GO:GO:0000003 | GO:GO:0000977 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009791 |
| GO:GO:0009908 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 |
| InterPro:IPR002487 | InterPro:IPR036879 | InterPro:MADS_MEF2-like | EnsemblPlantsGene:Os07g0605200 | EnsemblPlants:Os07t0605200-01 | PFAM:PF00319 |
| PFAM:PF01486 | PRINTS:PR00404 | PFscan:PS50066 | PFscan:PS51297 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF345 |
| UniProt:Q0D4T4 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_Kbox | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf |
| UniParc:UPI00000AAB6A | RefSeq:XP_015647484.1 | SEG:seg | : | : | : |
Description
MADS BOX GENE 18APETALA1 (AP1)/ FRUITFULL (FUL)-like MADS box transcription factor, Specification of inflorescence meristem identity (Os07t0605200-01)
Coordinates
chr7:+:24788476..24793679
Molecular Weight (calculated)
28286.4 Da
IEP (calculated)
9.293
GRAVY (calculated)
-0.935
Length
249 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGPVQLRR IENKINRQVT FSKRRNGLLK KAHEISVLCD ADVALIVFST KGKLYEFSSH SSMEGILERY QRYSFDERAV LEPNTEDQEN WGDEYGILKS
101: KLDALQKSQR QLLGEQLDTL TIKELQQLEH QLEYSLKHIR SKKNQLLFES ISELQKKEKS LKNQNNVLQK LMETEKEKNN AIINTNREEQ NGATPSTSSP
201: TPVTAPDPIP TTNNSQSQPR GSGESEAQPS PAQAGNSKLP PWMLRTSHT
101: KLDALQKSQR QLLGEQLDTL TIKELQQLEH QLEYSLKHIR SKKNQLLFES ISELQKKEKS LKNQNNVLQK LMETEKEKNN AIINTNREEQ NGATPSTSSP
201: TPVTAPDPIP TTNNSQSQPR GSGESEAQPS PAQAGNSKLP PWMLRTSHT
001: MGRGRVQLKR IENKINRQVT FSKRRSGLLK KAHEISVLCD AEVALIVFSS KGKLFEYSTD SCMERILERY DRYLYSDKQL VGRDVSQSEN WVLEHAKLKA
101: RVEVLEKNKR NFMGEDLDSL SLKELQSLEH QLDAAIKSIR SRKNQAMFES ISALQKKDKA LQDHNNSLLK KIKEREKKTG QQEGQLVQCS NSSSVLLPQY
201: CVTSSRDGFV ERVGGENGGA SSLTEPNSLL PAWMLRPTTT NE
101: RVEVLEKNKR NFMGEDLDSL SLKELQSLEH QLDAAIKSIR SRKNQAMFES ISALQKKDKA LQDHNNSLLK KIKEREKKTG QQEGQLVQCS NSSSVLLPQY
201: CVTSSRDGFV ERVGGENGGA SSLTEPNSLL PAWMLRPTTT NE
Arabidopsis Description
AGL8Agamous-like MADS-box protein AGL8 [Source:UniProtKB/Swiss-Prot;Acc:Q38876]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.