Factsheet for Os02t0682200-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0201700-02
Os01t0886200-01
Os01t0922800-01
Os02t0579600-00
Os02t0731200-01
Os02t0761000-01
Os03t0122600-01
Os03t0186600-01
Os03t0582400-01
Os03t0752800-02
Os04t0304400-01
Os05t0203800-02
Os06t0108500-01
Os06t0217300-01
Os06t0223300-01
Os06t0347700-00
Os07t0108900-02
Os07t0605200-01
Os08t0431900-00
Os08t0494100-02
Os08t0531900-01
Os10t0536100-01
Os12t0207000-01
Os12t0501700-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G45650.1	Os03t0582400-01	AT1G31630.1	15805477
AT2G45650.1	Os03t0582400-01	AT1G31640.1	15805477
AT2G45650.1	Os03t0752800-02	AT1G69120.1	15805477
AT2G45650.1	Os07t0108900-02	AT1G69120.1	15805477
AT2G45650.1	Os07t0605200-01	AT1G69120.1	15805477
AT2G45650.1	Os12t0501700-00	AT1G69120.1	15805477
AT2G45650.1	Os06t0223300-01	AT1G77980.1	15805477
AT2G45650.1	Os08t0494100-02	AT1G77980.1	15805477
AT2G45650.1	Os02t0761000-01	AT2G22540.1	15805477
AT2G45650.1	Os03t0186600-01	AT2G22540.1	15805477
AT2G45650.1	Os06t0217300-01	AT2G22540.1	15805477
AT2G45650.1	Os01t0922800-01	AT2G45660.1	15805477
AT2G45650.1	Os03t0122600-01	AT2G45660.1	15805477
AT2G45650.1	Os06t0108500-01	AT2G45660.1	15805477
AT2G45650.1	Os08t0531900-01	AT2G45660.1	15805477
AT2G45650.1	Os10t0536100-01	AT2G45660.1	15805477
AT2G45650.1	Os02t0579600-00	AT3G57230.1	15805477
AT2G45650.1	Os02t0731200-01	AT3G57230.1	15805477
AT2G45650.1	Os04t0304400-01	AT3G57230.1	15805477
AT2G45650.1	Os06t0347700-00	AT3G57230.1	15805477
AT2G45650.1	Os08t0431900-00	AT3G57230.1	15805477
AT2G45650.1	Os01t0201700-02	AT4G18960.1	9418042
AT2G45650.1	Os01t0886200-01	AT4G18960.1	9418042
AT2G45650.1	Os05t0203800-02	AT4G18960.1	9418042
AT2G45650.1	Os12t0207000-01	AT4G18960.1	9418042
AT2G45650.1	Os02t0761000-01	AT4G24540.1	15805477
AT2G45650.1	Os03t0186600-01	AT4G24540.1	15805477
AT2G45650.1	Os06t0217300-01	AT4G24540.1	15805477
AT2G45650.1	Os03t0752800-02	AT5G60910.1	15805477
AT2G45650.1	Os07t0108900-02	AT5G60910.1	15805477
AT2G45650.1	Os07t0605200-01	AT5G60910.1	15805477
AT2G45650.1	Os12t0501700-00	AT5G60910.1	15805477
AT3G61120.1	Os01t0922800-01	AT2G45660.1	15805477
AT3G61120.1	Os03t0122600-01	AT2G45660.1	15805477
AT3G61120.1	Os06t0108500-01	AT2G45660.1	15805477
AT3G61120.1	Os08t0531900-01	AT2G45660.1	15805477
AT3G61120.1	Os10t0536100-01	AT2G45660.1	15805477
AT3G61120.1	Os01t0201700-02	AT4G18960.1	15805477
AT3G61120.1	Os01t0886200-01	AT4G18960.1	15805477
AT3G61120.1	Os05t0203800-02	AT4G18960.1	15805477
AT3G61120.1	Os12t0207000-01	AT4G18960.1	15805477

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES07448	Sorghum	nucleus	87.2	85.49
HORVU0Hr1G032300.1	Barley	nucleus	88.8	83.15
HORVU6Hr1G066140.9	Barley	nucleus	88.8	82.84
TraesCS6B01G286400.1	Wheat	nucleus	80.8	77.99
CDY60686	Canola	cytosol, nucleus, plastid	20.4	76.12
GSMUA_Achr4P30120_001	Banana	nucleus	71.2	75.74
TraesCS6D01G240200.3	Wheat	nucleus	81.6	75.0
GSMUA_Achr2P10250_001	Banana	nucleus	71.2	73.55
GSMUA_Achr1P00750_001	Banana	nucleus	71.2	73.55
VIT_15s0048g01270.t01	Wine grape	nucleus	71.6	73.36
Os04t0580700-01	Rice	nucleus	74.0	72.83
Zm00001d051465_P002	Maize	nucleus	85.2	72.7
TraesCS6A01G259000.2	Wheat	nucleus	82.0	70.69
Solyc01g093960.2.1	Tomato	nucleus	68.4	67.86
PGSC0003DMT400000383	Potato	nucleus	69.2	67.84
KRH48304	Soybean	nucleus	66.0	67.35
KRH65193	Soybean	nucleus	64.8	66.12
Zm00001d017614_P003	Maize	nucleus	68.4	61.73
AT2G45650.1	Thale cress	nucleus	60.8	60.32
CDY18911	Canola	nucleus	54.8	57.81
CDY18912	Canola	nucleus	55.2	57.26
Bra004927.1-P	Field mustard	nucleus	55.2	57.02
CDX74754	Canola	nucleus	57.6	56.25
Bra000392.1-P	Field mustard	nucleus	54.8	53.31
CDY53885	Canola	nucleus	54.8	53.31
Os06t0162800-01	Rice	nucleus	46.4	51.56
Os09t0507200-01	Rice	nucleus	50.4	50.81
Os08t0531700-01	Rice	nucleus	50.4	50.6
AT3G61120.1	Thale cress	nucleus	48.8	50.0
Os03t0215400-01	Rice	nucleus	49.6	48.25
CDX89097	Canola	nucleus	46.4	47.15
Bra014454.1-P	Field mustard	nucleus	43.2	46.96
Os03t0753100-01	Rice	nucleus	44.8	46.86
Os08t0431900-00	Rice	nucleus	29.6	46.54
Os03t0752800-02	Rice	nucleus	45.6	46.34
Os07t0605200-01	Rice	nucleus	43.6	43.78
Os06t0347700-00	Rice	nucleus	24.4	41.5
Os07t0108900-02	Rice	nucleus	43.6	40.82
Os01t0201700-02	Rice	nucleus	37.2	33.7
Os02t0731200-01	Rice	nucleus	32.4	33.61
Os05t0203800-02	Rice	nucleus	36.4	33.46
Os12t0207000-01	Rice	nucleus	36.0	33.33
Os02t0579600-00	Rice	nucleus	32.0	33.33
Os04t0304400-01	Rice	nucleus	30.0	33.04
Os12t0501700-00	Rice	nucleus	30.4	32.62
Os01t0886200-01	Rice	nucleus	34.4	32.45
CDY42485	Canola	nucleus	47.6	31.48

Protein Annotations

MapMan:15.5.14	Gene3D:3.40.1810.10	EntrezGene:4330328	EMBL:AK069103	ProteinID:BAD27830.1	ProteinID:BAF09663.1
ProteinID:BAS80308.1	ncoils:Coil	ProteinID:EEE57586.1	EMBL:FJ666318	GO:GO:0000003	GO:GO:0000977
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009553
GO:GO:0009653	GO:GO:0009791	GO:GO:0009908	GO:GO:0009987	GO:GO:0010022	GO:GO:0010093
GO:GO:0010094	GO:GO:0010582	GO:GO:0030154	GO:GO:0040007	GO:GO:0045893	GO:GO:0045944
GO:GO:0046983	GO:GO:0048316	GO:GO:0048437	GO:GO:0048449	GO:GO:0048455	GO:GO:0048457
GO:GO:0048459	GO:GO:0048509	GO:GO:0048833	GO:GO:0080060	GO:GO:0080112	InterPro:IPR002100
InterPro:IPR002487	InterPro:IPR036879	InterPro:MADS_MEF2-like	EnsemblPlantsGene:Os02g0682200	EnsemblPlants:Os02t0682200-01	PFAM:PF00319
PFAM:PF01486	PRINTS:PR00404	ScanProsite:PS00350	PFscan:PS50066	PFscan:PS51297	PANTHER:PTHR11945
PANTHER:PTHR11945:SF146	UniProt:Q6EU39	SMART:SM00432	SUPFAM:SSF55455	InterPro:TF_Kbox	InterPro:TF_MADSbox
InterPro:TF_MADSbox_sf	EMBL:U78782	UniParc:UPI00000A6A5E	RefSeq:XP_015623947.1	:	:

Description

MOSAIC FLORAL ORGANS 1MADS-box transcription factor, Regulation of floral organ identity and meristem fate, Endosperm development (Os02t0682200-01)

Coordinates

chr2:+:27875979..27883946

Molecular Weight (calculated)

28439.0 Da

IEP (calculated)

9.327

GRAVY (calculated)

-0.646

Length

250 amino acids

Sequence
(BLAST)

001: MGRGRVELKR IENKINRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSS RGKLYEFGSA GITKTLERYQ HCCYNAQDSN NALSETQSWY HEMSKLKAKF
101: EALQRTQRHL LGEDLGPLSV KELQQLEKQL ECALSQARQR KTQLMMEQVE ELRRKERQLG EINRQLKHKL EVEGSTSNYR AMQQASWAQG AVVENGAAYV
201: QPPPHSAAMD SEPTLQIGYP HQFVPAEANT IQRSTAPAGA ENNFMLGWVL

Best Arabidopsis Sequence Match ( AT2G45650.1 )
(BLAST)

001: MGRGRVEMKR IENKINRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSS RGKLYEFGSV GIESTIERYN RCYNCSLSNN KPEETTQSWC QEVTKLKSKY
101: ESLVRTNRNL LGEDLGEMGV KELQALERQL EAALTATRQR KTQVMMEEME DLRKKERQLG DINKQLKIKF ETEGHAFKTF QDLWANSAAS VAGDPNNSEF
201: PVEPSHPNVL DCNTEPFLQI GFQQHYYVQG EGSSVSKSNV AGETNFVQGW VL

Arabidopsis Description

AGL6AGAMOUS-like protein 6 [Source:UniProtKB/TrEMBL;Acc:Q1PEU3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.