Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY33554 | Canola | nucleus | 94.53 | 94.53 |
| CDY65811 | Canola | nucleus | 94.14 | 94.14 |
| Bra038326.1-P | Field mustard | nucleus | 94.14 | 94.14 |
| CDX95960 | Canola | nucleus | 93.75 | 93.75 |
| Bra004361.1-P | Field mustard | nucleus | 66.02 | 89.42 |
| CDY04265 | Canola | nucleus | 94.53 | 87.36 |
| Bra004007.1-P | Field mustard | nucleus | 91.8 | 86.72 |
| CDY07357 | Canola | nucleus | 94.14 | 83.39 |
| AT1G26310.1 | Thale cress | nucleus | 76.95 | 77.25 |
| KRH07467 | Soybean | nucleus | 69.14 | 75.0 |
| KRH45412 | Soybean | nucleus | 67.58 | 73.31 |
| KRH70974 | Soybean | nucleus | 64.06 | 67.49 |
| Solyc05g056620.1.1 | Tomato | nucleus | 61.33 | 64.34 |
| PGSC0003DMT400072888 | Potato | nucleus | 61.33 | 64.34 |
| EER90862 | Sorghum | nucleus | 54.69 | 57.14 |
| GSMUA_Achr6P00050_001 | Banana | nucleus | 53.91 | 57.02 |
| GSMUA_Achr2P13650_001 | Banana | nucleus | 54.3 | 56.5 |
| TraesCS5A01G391700.1 | Wheat | nucleus | 52.34 | 54.92 |
| AT5G60910.1 | Thale cress | nucleus | 51.56 | 54.55 |
| GSMUA_Achr4P23540_001 | Banana | nucleus | 52.34 | 54.03 |
| Os03t0752800-02 | Rice | nucleus | 51.17 | 53.25 |
| TraesCS5B01G396600.2 | Wheat | nucleus | 51.56 | 52.59 |
| EER95753 | Sorghum | nucleus | 54.69 | 51.85 |
| EER97510 | Sorghum | nucleus | 51.17 | 51.78 |
| TraesCS5D01G401500.1 | Wheat | cytosol, nucleus | 51.17 | 51.57 |
| GSMUA_Achr8P04330_001 | Banana | nucleus | 49.22 | 51.43 |
| Os07t0108900-02 | Rice | nucleus | 53.52 | 51.31 |
| Zm00001d018667_P003 | Maize | nucleus | 54.3 | 51.29 |
| GSMUA_Achr7P00460_001 | Banana | nucleus | 50.0 | 51.2 |
| Zm00001d022088_P004 | Maize | nucleus | 51.17 | 50.78 |
| TraesCS2D01G262700.1 | Wheat | nucleus | 53.52 | 50.55 |
| TraesCS2B01G281000.1 | Wheat | nucleus | 53.52 | 50.0 |
| TraesCS2A01G261200.2 | Wheat | nucleus | 53.52 | 50.0 |
| Zm00001d013259_P002 | Maize | nucleus | 53.91 | 49.46 |
| Os07t0605200-01 | Rice | nucleus | 47.27 | 48.59 |
| GSMUA_Achr10P... | Banana | nucleus | 53.91 | 48.42 |
| GSMUA_Achr3P30440_001 | Banana | nucleus | 43.36 | 48.26 |
| TraesCS2D01G181400.3 | Wheat | nucleus | 49.22 | 47.19 |
| TraesCS2B01G200800.1 | Wheat | nucleus | 49.22 | 47.19 |
| AT3G30260.1 | Thale cress | nucleus | 45.7 | 46.99 |
| TraesCS2A01G174300.3 | Wheat | nucleus | 48.83 | 46.82 |
| Zm00001d034045_P003 | Maize | nucleus | 53.12 | 46.74 |
| GSMUA_Achr3P02280_001 | Banana | nucleus | 47.66 | 46.39 |
| Zm00001d007949_P001 | Maize | nucleus | 54.69 | 45.9 |
| HORVU2Hr1G063800.7 | Barley | nucleus, plastid | 53.12 | 44.44 |
| GSMUA_Achr3P25280_001 | Banana | nucleus | 46.09 | 44.36 |
| HORVU5Hr1G095630.3 | Barley | nucleus, plastid | 51.56 | 43.0 |
| AT1G24260.2 | Thale cress | nucleus | 38.67 | 39.44 |
| AT3G02310.1 | Thale cress | nucleus | 38.28 | 39.2 |
| AT2G45650.1 | Thale cress | nucleus | 38.28 | 38.89 |
| AT5G15800.2 | Thale cress | nucleus | 37.89 | 37.02 |
| AT3G61120.1 | Thale cress | nucleus | 34.38 | 36.07 |
| Os12t0501700-00 | Rice | nucleus | 32.42 | 35.62 |
| KXG23502 | Sorghum | nucleus | 30.86 | 35.43 |
| AT2G14210.2 | Thale cress | nucleus | 32.03 | 34.89 |
| AT2G03710.1 | Thale cress | nucleus | 35.16 | 34.88 |
| AT4G37940.1 | Thale cress | nucleus | 29.3 | 32.89 |
| AT2G42830.2 | Thale cress | nucleus | 30.86 | 31.85 |
| AT4G18960.1 | Thale cress | nucleus | 31.25 | 31.75 |
| Zm00001d023736_P001 | Maize | nucleus | 31.64 | 31.52 |
| AT3G57230.1 | Thale cress | nucleus | 28.52 | 30.42 |
| AT2G22630.2 | Thale cress | nucleus | 26.95 | 30.4 |
| AT3G58780.4 | Thale cress | nucleus | 30.47 | 27.76 |
| AT4G09960.4 | Thale cress | nucleus | 29.69 | 23.1 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EntrezGene:843244 | UniProt:A0A178W846 | ProteinID:AAF27070.1 | ProteinID:AAM28447.1 |
| ProteinID:AAM28448.1 | ProteinID:AAM28449.1 | ProteinID:AAM28450.1 | ProteinID:AAM28451.1 | ProteinID:AAM28452.1 | ProteinID:AAM28453.1 |
| ProteinID:AAM28454.1 | ProteinID:AAM28455.1 | ProteinID:AAM28456.1 | ProteinID:AAM28457.1 | ProteinID:AAM28458.1 | ProteinID:AAM28459.1 |
| ProteinID:AAM28460.1 | ProteinID:AAM28461.1 | ProteinID:AEE34887.1 | EMBL:AK175933 | Symbol:AP1 | ArrayExpress:AT1G69120 |
| EnsemblPlantsGene:AT1G69120 | RefSeq:AT1G69120 | TAIR:AT1G69120 | RefSeq:AT1G69120-TAIR-G | EnsemblPlants:AT1G69120.1 | TAIR:AT1G69120.1 |
| EMBL:AY087956 | Unigene:At.24302 | EMBL:BT004113 | EMBL:BT004951 | ncoils:Coil | GO:GO:0000003 |
| GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009653 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009933 | GO:GO:0009987 | GO:GO:0010582 |
| GO:GO:0030154 | GO:GO:0045893 | GO:GO:0045944 | GO:GO:0046982 | GO:GO:0046983 | InterPro:IPR002100 |
| InterPro:IPR002487 | InterPro:IPR036879 | InterPro:MADS_MEF2-like | RefSeq:NP_177074.1 | ProteinID:OAP14244.1 | UniProt:P35631 |
| PFAM:PF00319 | PFAM:PF01486 | PO:PO:0000037 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0004507 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0025022 | PRINTS:PR00404 | ScanProsite:PS00350 |
| PFscan:PS50066 | PFscan:PS51297 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF244 | SMART:SM00432 | SUPFAM:SSF55455 |
| InterPro:TF_Kbox | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI000000C289 | EMBL:Z16421 | SEG:seg |
Description
AP1AP1 [Source:UniProtKB/TrEMBL;Acc:A0A178W846]
Coordinates
chr1:-:25982294..25986349
Molecular Weight (calculated)
30184.3 Da
IEP (calculated)
8.576
GRAVY (calculated)
-0.892
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGRVQLKR IENKINRQVT FSKRRAGLLK KAHEISVLCD AEVALVVFSH KGKLFEYSTD SCMEKILERY ERYSYAERQL IAPESDVNTN WSMEYNRLKA
101: KIELLERNQR HYLGEDLQAM SPKELQNLEQ QLDTALKHIR TRKNQLMYES INELQKKEKA IQEQNSMLSK QIKEREKILR AQQEQWDQQN QGHNMPPPLP
201: PQQHQIQHPY MLSHQPSPFL NMGGLYQEDD PMAMRRNDLE LTLEPVYNCN LGCFAA
101: KIELLERNQR HYLGEDLQAM SPKELQNLEQ QLDTALKHIR TRKNQLMYES INELQKKEKA IQEQNSMLSK QIKEREKILR AQQEQWDQQN QGHNMPPPLP
201: PQQHQIQHPY MLSHQPSPFL NMGGLYQEDD PMAMRRNDLE LTLEPVYNCN LGCFAA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.