Factsheet for Bra004361.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000392.1-P
Bra000393.1-P
Bra004007.1-P
Bra004361.1-P
Bra004927.1-P
Bra004928.1-P
Bra009436.1-P
Bra009911.1-P
Bra010623.1-P
Bra011509.1-P
Bra011797.1-P
Bra017376.1-P
Bra017638.1-P
Bra019221.1-P
Bra020524.1-P
Bra020525.1-P
Bra020550.1-P
Bra020552.1-P
Bra020600.1-P
Bra021470.1-P
Bra024372.1-P
Bra025126.1-P
Bra026543.1-P
Bra029424.1-P
Bra030228.1-P
Bra031905.1-P
Bra032192.1-P
Bra036931.1-P
Bra038326.1-P
Bra038511.1-P
Bra039170.1-P
Bra039324.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G69120.1	Bra009911.1-P	AT1G31630.1	15805477
AT1G69120.1	Bra020524.1-P	AT1G31630.1	15805477
AT1G69120.1	Bra020525.1-P	AT1G31630.1	15805477
AT1G69120.1	Bra020550.1-P	AT1G31630.1	15805477
AT1G69120.1	Bra020552.1-P	AT1G31630.1	15805477
AT1G69120.1	Bra009911.1-P	AT1G31640.1	15805477
AT1G69120.1	Bra020524.1-P	AT1G31640.1	15805477
AT1G69120.1	Bra020525.1-P	AT1G31640.1	15805477
AT1G69120.1	Bra020550.1-P	AT1G31640.1	15805477
AT1G69120.1	Bra020552.1-P	AT1G31640.1	15805477
AT1G69120.1	Bra032192.1-P	AT1G43850.1	16854969
AT1G69120.1	Bra036931.1-P	AT1G43850.1	16854969
AT1G69120.1	Bra009436.1-P	AT1G46408.1	15805477
AT1G69120.1	Bra020600.1-P	AT1G48150.1	15805477
AT1G69120.1	Bra004007.1-P	AT1G69120.1	15604664
AT1G69120.1	Bra004361.1-P	AT1G69120.1	15604664
AT1G69120.1	Bra038326.1-P	AT1G69120.1	15604664
AT1G69120.1	Bra017376.1-P	AT2G03710.1	15805477
AT1G69120.1	Bra025126.1-P	AT2G03710.1	15805477
AT1G69120.1	Bra026543.1-P	AT2G03710.1	15805477
AT1G69120.1	Bra030228.1-P	AT2G22540.1	11439126
AT1G69120.1	Bra038511.1-P	AT2G22540.1	11439126
AT1G69120.1	Bra030228.1-P	AT2G22540.1	15805477
AT1G69120.1	Bra038511.1-P	AT2G22540.1	15805477
AT1G69120.1	Bra000392.1-P	AT2G45650.1	15805477
AT1G69120.1	Bra004927.1-P	AT2G45650.1	15805477
AT1G69120.1	Bra000393.1-P	AT2G45660.1	11439126
AT1G69120.1	Bra004928.1-P	AT2G45660.1	11439126
AT1G69120.1	Bra039324.1-P	AT2G45660.1	11439126
AT1G69120.1	Bra000393.1-P	AT2G45660.1	15805477
AT1G69120.1	Bra004928.1-P	AT2G45660.1	15805477
AT1G69120.1	Bra039324.1-P	AT2G45660.1	15805477
AT1G69120.1	Bra021470.1-P	AT3G02310.1	15604664
AT1G69120.1	Bra039170.1-P	AT3G02310.1	15604664
AT1G69120.1	Bra011509.1-P	AT3G57230.1	15805477
AT1G69120.1	Bra017638.1-P	AT3G57230.1	15805477
AT1G69120.1	Bra029424.1-P	AT4G11880.1	15805477
AT1G69120.1	Bra019221.1-P	AT4G24540.1	11439126
AT1G69120.1	Bra019221.1-P	AT4G24540.1	15805477
AT1G69120.1	Bra010623.1-P	AT4G37940.1	15805477
AT1G69120.1	Bra011797.1-P	AT4G37940.1	15805477
AT1G69120.1	Bra020600.1-P	AT5G27130.1	15805477
AT1G69120.1	Bra024372.1-P	AT5G65260.1	11439126
AT1G69120.1	Bra031905.1-P	AT5G65260.1	11439126

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33554	Canola	nucleus	92.06	67.97
CDX95960	Canola	nucleus	91.53	67.58
AT1G69120.1	Thale cress	nucleus	89.42	66.02
Bra038326.1-P	Field mustard	nucleus	88.89	65.62
Bra004007.1-P	Field mustard	nucleus	86.77	60.52
KRH07467	Soybean	nucleus	75.13	60.17
KRH45412	Soybean	nucleus	74.6	59.75
Bra025411.1-P	Field mustard	nucleus	54.5	58.52
Bra011021.1-P	Field mustard	nucleus	76.72	57.09
KRH70974	Soybean	nucleus	69.31	53.91
Solyc05g056620.1.1	Tomato	nucleus	67.72	52.46
PGSC0003DMT400072888	Potato	nucleus	67.72	52.46
EER90862	Sorghum	nucleus	64.02	49.39
GSMUA_Achr6P00050_001	Banana	nucleus	62.96	49.17
GSMUA_Achr2P13650_001	Banana	nucleus	63.49	48.78
TraesCS5A01G391700.1	Wheat	nucleus	62.43	48.36
Bra029347.1-P	Field mustard	nucleus	61.38	48.33
Bra035952.1-P	Field mustard	nucleus	60.85	47.72
GSMUA_Achr4P23540_001	Banana	nucleus	62.43	47.58
Os03t0752800-02	Rice	nucleus	61.9	47.56
Bra012997.1-P	Field mustard	nucleus	60.32	47.3
TraesCS5B01G396600.2	Wheat	nucleus	61.9	46.61
GSMUA_Achr8P04330_001	Banana	nucleus	60.32	46.53
GSMUA_Achr3P30440_001	Banana	nucleus	56.08	46.09
TraesCS5D01G401500.1	Wheat	cytosol, nucleus	61.9	46.06
EER97510	Sorghum	nucleus	61.38	45.85
GSMUA_Achr7P00460_001	Banana	nucleus	60.32	45.6
Zm00001d022088_P004	Maize	nucleus	60.32	44.19
Zm00001d013259_P002	Maize	nucleus	64.55	43.73
EER95753	Sorghum	nucleus	62.43	43.7
Zm00001d018667_P003	Maize	nucleus	62.43	43.54
Os07t0108900-02	Rice	nucleus	61.38	43.45
TraesCS2D01G262700.1	Wheat	nucleus	61.9	43.17
GSMUA_Achr10P...	Banana	nucleus	64.55	42.81
TraesCS2A01G261200.2	Wheat	nucleus	61.9	42.7
TraesCS2B01G281000.1	Wheat	nucleus	61.9	42.7
GSMUA_Achr3P02280_001	Banana	nucleus	59.26	42.59
Os07t0605200-01	Rice	nucleus	56.08	42.57
TraesCS2B01G200800.1	Wheat	nucleus	58.73	41.57
TraesCS2A01G174300.3	Wheat	nucleus	58.73	41.57
TraesCS2D01G181400.3	Wheat	nucleus	58.73	41.57
GSMUA_Achr3P25280_001	Banana	nucleus	57.14	40.6
Bra036201.1-P	Field mustard	nucleus	52.91	40.32
Zm00001d034045_P003	Maize	nucleus	61.9	40.21
Zm00001d007949_P001	Maize	nucleus	62.43	38.69
HORVU2Hr1G063800.7	Barley	nucleus, plastid	61.9	38.24
HORVU5Hr1G095630.3	Barley	nucleus, plastid	61.38	37.78
Bra010955.1-P	Field mustard	nucleus	48.15	37.3
Bra030032.1-P	Field mustard	nucleus	49.21	36.9
Bra008674.1-P	Field mustard	nucleus	48.68	36.51
Bra006322.1-P	Field mustard	nucleus	48.15	36.4
Bra021470.1-P	Field mustard	nucleus	48.15	36.11
Bra039170.1-P	Field mustard	nucleus	47.62	36.0
Bra032814.1-P	Field mustard	nucleus	48.15	35.97
Bra004927.1-P	Field mustard	nucleus	43.39	33.88
Bra014454.1-P	Field mustard	nucleus	40.74	33.48
Bra025126.1-P	Field mustard	nucleus	45.5	33.46
Bra000392.1-P	Field mustard	nucleus	44.97	33.07
Os12t0501700-00	Rice	nucleus	40.21	32.62
Bra026543.1-P	Field mustard	nucleus	46.03	32.34
KXG23502	Sorghum	nucleus	38.1	32.29
Bra010623.1-P	Field mustard	nucleus	34.39	30.37
Bra011797.1-P	Field mustard	nucleus	36.51	30.26
Bra030222.1-P	Field mustard	nucleus	35.98	29.96
Bra037895.1-P	Field mustard	nucleus	35.98	29.57
Zm00001d023736_P001	Maize	nucleus	39.15	28.79
Bra039921.1-P	Field mustard	nucleus	34.39	28.63
Bra013364.1-P	Field mustard	nucleus	38.1	28.57
Bra012564.1-P	Field mustard	nucleus	37.57	28.29
Bra004716.1-P	Field mustard	nucleus	36.51	28.28
Bra007419.1-P	Field mustard	nucleus	36.51	28.16
Bra000696.1-P	Field mustard	nucleus	34.39	28.14
Bra017638.1-P	Field mustard	nucleus	35.45	27.92
Bra014552.1-P	Field mustard	nucleus	36.51	27.82
Bra017376.1-P	Field mustard	nucleus	34.39	26.75
Bra003356.1-P	Field mustard	nucleus	34.39	23.81
Bra040719.1-P	Field mustard	nucleus	20.63	22.94
Bra011509.1-P	Field mustard	nucleus	33.33	21.72

Protein Annotations

MapMan:15.5.14	Gene3D:3.40.1810.10	EnsemblPlantsGene:Bra004361	EnsemblPlants:Bra004361.1	EnsemblPlants:Bra004361.1-P	ncoils:Coil
GO:GO:0000977	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0045944	GO:GO:0046983	InterPro:IPR002100	InterPro:IPR002487	InterPro:IPR036879	UniProt:M4CJH7
InterPro:MADS_MEF2-like	PFAM:PF00319	PFAM:PF01486	PRINTS:PR00404	ScanProsite:PS00350	PFscan:PS50066
PFscan:PS51297	PANTHER:PTHR11945	PANTHER:PTHR11945:SF244	SMART:SM00432	SUPFAM:SSF55455	InterPro:TF_Kbox
InterPro:TF_MADSbox	InterPro:TF_MADSbox_sf	UniParc:UPI000254182D	:	:	:

Description

AT1G69120 (E=6e-092) AP1, AGL7 | AP1 (APETALA1); DNA binding / protein binding / protein heterodimerization/ transcription activator/ transcription factor

Coordinates

chrA07:-:18224463..18227022

Molecular Weight (calculated)

22516.2 Da

IEP (calculated)

9.592

GRAVY (calculated)

-0.671

Length

189 amino acids

Sequence
(BLAST)

001: MGRGRVQLKR IENKINRQVT FSKRRAGLFK KAHEISVLCD AEVALVVFSH KGKLFEYSTD SCMEKILERY ERYSYAERQL IAPESDVNTN WSMEYNRLKA
101: KIELLERNQR HYLGEDLQAM SPKELQNLEQ QLDTALKHIR SRKNQLMYDS VNELQRKEKA IQEQNSMLSK QVTFVLIYIW STCFPLHYY

Best Arabidopsis Sequence Match ( AT1G69120.2 )
(BLAST)

001: MGRGRVQLKR IENKINRQVT FSKRRAGLLK KAHEISVLCD AEVALVVFSH KGKLFEYSTD SCMEKILERY ERYSYAERQL IAPESDVNTN WSMEYNRLKA
101: KIELLERNQR HYLGEDLQAM SPKELQNLEQ QLDTALKHIR TRKNQLMYES INELQKKEKA IQEQNSMLSK QIKEREKILR AQQEQWDQQN QGHNMPPPLP
201: PQQHQIQHPY MLSHQPSPFL NMGLMQWSPN EQTY

Arabidopsis Description

AP1AP1 [Source:UniProtKB/TrEMBL;Acc:A0A178W846]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.