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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra000392.1-P
Bra002480.1-P
Bra002611.1-P
Bra004007.1-P
Bra004361.1-P
Bra004927.1-P
Bra007829.1-P
Bra009436.1-P
Bra009911.1-P
Bra011938.1-P
Bra015643.1-P
Bra017376.1-P
Bra018296.1-P
Bra020242.1-P
Bra020245.1-P
Bra020246.1-P
Bra020247.1-P
Bra020524.1-P
Bra020525.1-P
Bra020550.1-P
Bra020552.1-P
Bra020600.1-P
Bra022341.1-P
Bra025126.1-P
Bra026543.1-P
Bra031864.1-P
Bra032057.1-P
Bra033467.1-P
Bra035685.1-P
Bra037571.1-P
Bra038326.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G31630.1 Bra011938.1-P AT1G01530.1 15805477
AT1G31630.1 Bra035685.1-P AT1G01530.1 15805477
AT1G31630.1 Bra011938.1-P AT1G65360.1 15805477
AT1G31630.1 Bra035685.1-P AT1G65360.1 15805477
AT1G31630.1 Bra004007.1-P AT1G69120.1 15805477
AT1G31630.1 Bra004361.1-P AT1G69120.1 15805477
AT1G31630.1 Bra038326.1-P AT1G69120.1 15805477
AT1G31630.1 Bra017376.1-P AT2G03710.1 15805477
AT1G31630.1 Bra025126.1-P AT2G03710.1 15805477
AT1G31630.1 Bra026543.1-P AT2G03710.1 15805477
AT1G31630.1 Bra007829.1-P AT2G24840.1 18713950
AT1G31630.1 Bra032057.1-P AT2G24840.1 18713950
AT1G31630.1 Bra000392.1-P AT2G45650.1 15805477
AT1G31630.1 Bra004927.1-P AT2G45650.1 15805477
AT1G31630.1 Bra011938.1-P AT4G36590.1 15805477
AT1G31630.1 Bra035685.1-P AT4G36590.1 15805477
AT1G31630.1 Bra009911.1-P AT5G27960.1 15805477
AT1G31630.1 Bra020524.1-P AT5G27960.1 15805477
AT1G31630.1 Bra020525.1-P AT5G27960.1 15805477
AT1G31630.1 Bra020550.1-P AT5G27960.1 15805477
AT1G31630.1 Bra020552.1-P AT5G27960.1 15805477
AT1G31630.1 Bra002611.1-P AT5G58890.1 15805477
AT1G31630.1 Bra002480.1-P AT5G60440.1 15805477
AT1G31630.1 Bra020242.1-P AT5G60440.1 15805477
AT1G31630.1 Bra020245.1-P AT5G60440.1 15805477
AT1G31630.1 Bra020246.1-P AT5G60440.1 15805477
AT1G31630.1 Bra020247.1-P AT5G60440.1 15805477
AT1G31640.1 Bra011938.1-P AT1G65360.1 15805477
AT1G31640.1 Bra035685.1-P AT1G65360.1 15805477
AT1G31640.1 Bra004007.1-P AT1G69120.1 15805477
AT1G31640.1 Bra004361.1-P AT1G69120.1 15805477
AT1G31640.1 Bra038326.1-P AT1G69120.1 15805477
AT1G31640.1 Bra017376.1-P AT2G03710.1 15805477
AT1G31640.1 Bra025126.1-P AT2G03710.1 15805477
AT1G31640.1 Bra026543.1-P AT2G03710.1 15805477
AT1G31640.1 Bra000392.1-P AT2G45650.1 15805477
AT1G31640.1 Bra004927.1-P AT2G45650.1 15805477
AT1G31640.1 Bra022341.1-P AT3G18650.1 15805477
AT1G31640.1 Bra037571.1-P AT3G18650.1 15805477
AT1G31640.1 Bra009911.1-P AT5G27960.1 15805477
AT1G31640.1 Bra020524.1-P AT5G27960.1 15805477
AT1G31640.1 Bra020525.1-P AT5G27960.1 15805477
AT1G31640.1 Bra020550.1-P AT5G27960.1 15805477
AT1G31640.1 Bra020552.1-P AT5G27960.1 15805477
AT1G31640.1 Bra002480.1-P AT5G60440.1 15805477
AT1G31640.1 Bra020242.1-P AT5G60440.1 15805477
AT1G31640.1 Bra020245.1-P AT5G60440.1 15805477
AT1G31640.1 Bra020246.1-P AT5G60440.1 15805477
AT1G31640.1 Bra020247.1-P AT5G60440.1 15805477
AT1G31640.1 Bra031864.1-P AT5G65330.1 15805477
AT1G65300.1 Bra011938.1-P AT1G01530.1 15805477
AT1G65300.1 Bra035685.1-P AT1G01530.1 15805477
AT1G65300.1 Bra007829.1-P AT2G24840.1 18713950
AT1G65300.1 Bra032057.1-P AT2G24840.1 18713950
AT1G65300.1 Bra018296.1-P AT3G51920.1 17360592
AT1G65300.1 Bra033467.1-P AT3G51920.1 17360592
AT1G65300.1 Bra011938.1-P AT4G36590.1 15805477
AT1G65300.1 Bra035685.1-P AT4G36590.1 15805477
AT1G65300.1 Bra002480.1-P AT5G60440.1 15805477
AT1G65300.1 Bra020242.1-P AT5G60440.1 15805477
AT1G65300.1 Bra020245.1-P AT5G60440.1 15805477
AT1G65300.1 Bra020246.1-P AT5G60440.1 15805477
AT1G65300.1 Bra020247.1-P AT5G60440.1 15805477
AT1G65330.1 Bra011938.1-P AT1G01530.1 15805477
AT1G65330.1 Bra035685.1-P AT1G01530.1 15805477
AT1G65330.1 Bra009436.1-P AT1G46408.1 15805477
AT1G65330.1 Bra007829.1-P AT2G24840.1 18713950
AT1G65330.1 Bra032057.1-P AT2G24840.1 18713950
AT1G65330.1 Bra011938.1-P AT4G36590.1 15805477
AT1G65330.1 Bra035685.1-P AT4G36590.1 15805477
AT1G65330.1 Bra009436.1-P AT5G04640.1 15805477
AT1G65330.1 Bra020600.1-P AT5G27130.1 15805477
AT1G65330.1 Bra002480.1-P AT5G60440.1 15805477
AT1G65330.1 Bra020242.1-P AT5G60440.1 15805477
AT1G65330.1 Bra020245.1-P AT5G60440.1 15805477
AT1G65330.1 Bra020246.1-P AT5G60440.1 15805477
AT1G65330.1 Bra020247.1-P AT5G60440.1 15805477
AT5G26650.1 Bra011938.1-P AT1G01530.1 15805477
AT5G26650.1 Bra035685.1-P AT1G01530.1 15805477
AT5G26650.1 Bra002480.1-P AT5G60440.1 15805477
AT5G26650.1 Bra020242.1-P AT5G60440.1 15805477
AT5G26650.1 Bra020245.1-P AT5G60440.1 15805477
AT5G26650.1 Bra020246.1-P AT5G60440.1 15805477
AT5G26650.1 Bra020247.1-P AT5G60440.1 15805477
AT5G27960.1 Bra009911.1-P AT1G31630.1 15805477
AT5G27960.1 Bra020524.1-P AT1G31630.1 15805477
AT5G27960.1 Bra020525.1-P AT1G31630.1 15805477
AT5G27960.1 Bra020550.1-P AT1G31630.1 15805477
AT5G27960.1 Bra020552.1-P AT1G31630.1 15805477
AT5G27960.1 Bra009911.1-P AT1G31640.1 15805477
AT5G27960.1 Bra020524.1-P AT1G31640.1 15805477
AT5G27960.1 Bra020525.1-P AT1G31640.1 15805477
AT5G27960.1 Bra020550.1-P AT1G31640.1 15805477
AT5G27960.1 Bra020552.1-P AT1G31640.1 15805477
AT5G27960.1 Bra009436.1-P AT1G46408.1 15805477
AT5G27960.1 Bra020600.1-P AT1G48150.1 15805477
AT5G27960.1 Bra015643.1-P AT1G77980.1 15805477
AT5G27960.1 Bra011938.1-P AT4G36590.1 15805477
AT5G27960.1 Bra035685.1-P AT4G36590.1 15805477
AT5G27960.1 Bra002480.1-P AT5G60440.1 15805477
AT5G27960.1 Bra020242.1-P AT5G60440.1 15805477
AT5G27960.1 Bra020245.1-P AT5G60440.1 15805477
AT5G27960.1 Bra020246.1-P AT5G60440.1 15805477
AT5G27960.1 Bra020247.1-P AT5G60440.1 15805477
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY67043 Canola nucleus 95.26 92.58
Bra020552.1-P Field mustard nucleus 75.53 84.16
Bra020524.1-P Field mustard nucleus 61.05 64.44
Bra020525.1-P Field mustard nucleus 65.53 63.04
Bra009911.1-P Field mustard mitochondrion, nucleus 43.16 45.05
GSMUA_Achr2P18410_001 Banana nucleus 3.95 36.59
AT5G27960.1 Thale cress nucleus 29.47 35.0
AT5G26650.1 Thale cress nucleus 33.42 34.7
AT1G65330.1 Thale cress nucleus 25.0 34.05
AT1G65300.1 Thale cress nucleus 24.47 33.45
AT5G26580.1 Thale cress nucleus 29.74 32.75
AT5G35120.1 Thale cress cytosol 9.21 32.71
AT1G59930.1 Thale cress cytosol 10.79 31.06
AT1G31630.1 Thale cress mitochondrion 27.37 30.68
Bra020555.1-P Field mustard nucleus 16.84 29.63
KXG28893 Sorghum nucleus 12.37 27.98
TraesCS3D01G138400.1 Wheat cytosol 13.95 27.89
TraesCS3B01G155200.1 Wheat cytosol 13.95 27.18
KXG28892 Sorghum nucleus 13.16 27.03
PGSC0003DMT400003073 Potato cytosol 7.63 26.85
Bra009913.1-P Field mustard nucleus 14.21 26.6
TraesCS6A01G020500.1 Wheat mitochondrion, nucleus 10.79 26.28
Bra024521.1-P Field mustard mitochondrion 11.05 25.93
HORVU6Hr1G003730.1 Barley nucleus 5.79 25.88
Bra005166.1-P Field mustard mitochondrion, nucleus 8.42 25.6
GSMUA_Achr3P05500_001 Banana nucleus 14.74 25.34
AT1G31640.1 Thale cress mitochondrion 30.79 25.22
TraesCS3A01G137500.1 Wheat cytosol 13.16 25.13
OQU83806 Sorghum nucleus 11.32 24.57
Bra018490.1-P Field mustard nucleus 18.68 24.48
Bra041022.1-P Field mustard nucleus 21.32 24.25
Bra029469.1-P Field mustard nucleus 19.21 24.01
GSMUA_Achr3P24560_001 Banana nucleus 14.47 23.71
GSMUA_Achr3P08500_001 Banana nucleus 14.21 23.48
Bra012335.1-P Field mustard mitochondrion 10.0 23.46
EES10067 Sorghum mitochondrion 12.63 23.3
HORVU7Hr1G121600.1 Barley nucleus 11.32 23.24
TraesCS7B01G484600.1 Wheat nucleus 10.0 23.17
TraesCS7D01G550500.1 Wheat nucleus 11.05 22.7
KXG28889 Sorghum nucleus 14.74 22.4
GSMUA_AchrUn_... Banana nucleus 13.68 22.32
TraesCS6D01G024000.1 Wheat mitochondrion, nucleus 10.79 22.28
GSMUA_Achr8P06150_001 Banana nucleus 14.21 22.04
TraesCS7A01G559500.1 Wheat nucleus 11.05 21.99
GSMUA_Achr2P18400_001 Banana nucleus 13.42 21.98
KXG32310 Sorghum nucleus 13.95 21.9
Zm00001d048894_P001 Maize mitochondrion 14.21 21.86
EES06917 Sorghum mitochondrion, nucleus 14.74 21.62
TraesCS7B01G484000.1 Wheat nucleus 10.53 21.62
TraesCS6B01G027900.1 Wheat nucleus 12.89 21.59
TraesCS7D01G548500.1 Wheat plastid 13.16 21.28
TraesCS6B01G391600.1 Wheat nucleus 13.68 21.22
TraesCS6B01G391700.1 Wheat nucleus 13.68 21.22
Zm00001d013792_P001 Maize mitochondrion, nucleus 15.53 21.22
Bra039404.1-P Field mustard nucleus 16.84 21.19
TraesCS6D01G023800.1 Wheat mitochondrion 12.63 21.15
TraesCS7A01G561000.1 Wheat nucleus 12.89 20.94
TraesCS6A01G020900.1 Wheat mitochondrion 11.58 20.85
TraesCS6A01G022700.1 Wheat mitochondrion 12.37 20.7
TraesCS6D01G024300.1 Wheat mitochondrion 12.37 20.7
HORVU6Hr1G085540.1 Barley mitochondrion 12.37 20.52
TraesCS7B01G485400.1 Wheat nucleus 12.63 20.51
TraesCS6B01G028100.1 Wheat mitochondrion 10.0 20.21
TraesCS6D01G341700.1 Wheat nucleus 12.63 19.92
TraesCS6D01G342000.1 Wheat nucleus 12.63 19.92
TraesCS6B01G028300.1 Wheat mitochondrion 11.05 19.91
Bra035448.1-P Field mustard nucleus 13.68 19.7
OQU83804 Sorghum mitochondrion 12.11 19.57
TraesCS3A01G312600.1 Wheat nucleus 12.89 19.52
TraesCS3B01G159600.1 Wheat nucleus 12.89 19.52
HORVU2Hr1G022060.1 Barley nucleus, plastid 10.53 19.51
KXG28888 Sorghum nucleus 12.89 19.22
KXG28890 Sorghum mitochondrion 12.89 19.22
TraesCS6A01G358900.1 Wheat nucleus 11.84 19.07
TraesCS6D01G341800.1 Wheat mitochondrion, nucleus 12.37 18.95
Bra035449.1-P Field mustard nucleus 13.16 18.94
Os03t0582400-01 Rice nucleus 12.37 18.88
TraesCS2B01G171700.1 Wheat mitochondrion 9.47 18.85
TraesCS6A01G359100.1 Wheat mitochondrion 12.89 18.77
TraesCS6D01G342100.1 Wheat mitochondrion 12.89 18.77
TraesCS7D01G550600.1 Wheat nucleus 11.84 18.67
Zm00001d016791_P001 Maize mitochondrion 13.95 18.47
TraesCS6B01G391800.1 Wheat mitochondrion 12.63 18.39
TraesCS7D01G551000.1 Wheat nucleus 11.32 18.22
KXG38099 Sorghum plastid 15.0 18.1
TraesCS7B01G484500.1 Wheat nucleus 11.32 17.84
HORVU6Hr1G085570.1 Barley mitochondrion, nucleus 12.11 17.69
EER91288 Sorghum mitochondrion, nucleus 14.47 17.52
TraesCS6A01G359700.1 Wheat nucleus 9.74 16.3
TraesCS7B01G484100.1 Wheat mitochondrion, nucleus 10.0 15.77
Bra040248.1-P Field mustard nucleus 17.11 15.74
TraesCS7A01G551000.1 Wheat nucleus 12.37 15.02
TraesCS7D01G536700.1 Wheat nucleus 12.37 15.02
TraesCS2D01G128000.1 Wheat nucleus 8.16 14.62
TraesCS2D01G150900.1 Wheat mitochondrion 11.58 14.33
TraesCS6D01G342700.1 Wheat nucleus 10.53 12.95
TraesCS2B01G146100.1 Wheat nucleus 11.58 12.12
TraesCS6B01G392600.1 Wheat nucleus 9.74 11.94
TraesCS2A01G146400.1 Wheat mitochondrion 11.05 11.8
HORVU6Hr1G085670.1 Barley nucleus 9.74 11.14
TraesCS7A01G398800.1 Wheat nucleus 9.21 10.87
TraesCS7B01G299400.1 Wheat nucleus 9.21 10.84
TraesCS7D01G393000.1 Wheat nucleus 8.95 10.53
PGSC0003DMT400089615 Potato cytosol 5.26 8.4
Protein Annotations
MapMan:15.5.14Gene3D:3.40.1810.10EnsemblPlantsGene:Bra020550EnsemblPlants:Bra020550.1EnsemblPlants:Bra020550.1-PGO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0046983InterPro:IPR002100InterPro:IPR036879
UniProt:M4DVK6PFAM:PF00319PRINTS:PR00404PFscan:PS50066PANTHER:PTHR11945PANTHER:PTHR11945:SF355
SMART:SM00432SUPFAM:SSF55455InterPro:TF_MADSboxInterPro:TF_MADSbox_sfUniParc:UPI0002546C8BSEG:seg
Description
AT1G65330 (E=1e-030) PHE1, AGL37 | PHE1 (PHERES1); DNA binding / transcription factor
Coordinates
chrA02:-:24640247..24641389
Molecular Weight (calculated)
42856.0 Da
IEP (calculated)
4.788
GRAVY (calculated)
-0.782
Length
380 amino acids
Sequence
(BLAST)
001: MPRGRIKIEP MTNSAAMNQT FRKRKKGLLK KANELSTLYG VKVCAVINSC DSTEPPEFWP SKEGAEAVHS AFMGVLPEER CKRMYDQERH LEERIQKGQD
101: RVMRLHTENR EIELTEVMFD LLKGKTLMPD QYGDPSFMRD LNLFIGDYVK NISHRIEFLE ANGEPVPPNV AATDASGPVV GDANPFVVET EGLVSNPTEA
201: YDHMRQYDGM DMSVNEQALG GFNDHVHHQE PFQYQTPTNF YDQTQPMFYG SSQGMDMNHQ EPFQYQGPAN FDDQTQPMFY GSSQDKYTGL NHDQGQSSNQ
301: YPNSNQSFMS LLMGQPQQMS DVEEPARVAS MGDNNNGYHQ LLVTSQMPST TTTTTTTTAA ATDLSGHRIN NGWPTRFGLD
Best Arabidopsis Sequence Match ( AT5G26650.1 )
(BLAST)
001: MKKVKLSLIA NERSRKTSFI KRKDGIFKKL HELSTLCGVQ ACALIYSPFI PVPESWPSRE GAKKVASRFL EMPPTARTKK MMDQETYLME RITKAKEQLK
101: NLAAENRELQ VRRFMFDCVE GKMSQYHYDA KDLQDLQSCI NLYLDQLNGR IESIKENGES LLSSVSPFPT RIGVDEIGDE SFSDSPIHAT TGVVDTLNAT
201: NPHVLTGDMT PFLDADATAV TASSRFFDHI PYENMNMSQN LHEPFQHLVP TNVCDFFQNQ NMNQVQYQAP NNLFNQIQRE FYNINLNLNL NLNSNQYLNQ
301: QQSFMNPMVE QHMNHVGGRE SIPFVDGNCY NYHQLPSNQL PAVDHASTSY MPSTTGVYDP YINNNL
Arabidopsis Description
AGL36Agamous-like MADS-box protein AGL36 [Source:UniProtKB/Swiss-Prot;Acc:Q7XJK6]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.