Factsheet for GSMUA_Achr3P05500_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr1P00750_001
GSMUA_Achr1P04700_001
GSMUA_Achr1P14070_001
GSMUA_Achr1P27230_001
GSMUA_Achr2P01120_001
GSMUA_Achr2P06250_001
GSMUA_Achr2P10250_001
GSMUA_Achr2P12680_001
GSMUA_Achr2P13650_001
GSMUA_Achr2P18400_001
GSMUA_Achr2P18410_001
GSMUA_Achr3P02280_001
GSMUA_Achr3P04450_001
GSMUA_Achr3P05500_001
GSMUA_Achr3P08500_001
GSMUA_Achr3P09330_001
GSMUA_Achr3P15930_001
GSMUA_Achr3P24560_001
GSMUA_Achr3P25040_001
GSMUA_Achr3P25280_001
GSMUA_Achr3P25390_001
GSMUA_Achr3P30440_001
GSMUA_Achr4P14460_001
GSMUA_Achr4P22570_001
GSMUA_Achr4P23540_001
GSMUA_Achr4P28260_001
GSMUA_Achr4P30120_001
GSMUA_Achr5P01940_001
GSMUA_Achr5P01990_001
GSMUA_Achr5P07820_001
GSMUA_Achr5P09010_001
GSMUA_Achr5P27590_001
GSMUA_Achr6P00050_001
GSMUA_Achr6P15990_001
GSMUA_Achr6P23670_001
GSMUA_Achr6P24410_001
GSMUA_Achr7P00460_001
GSMUA_Achr7P01390_001
GSMUA_Achr7P26700_001
GSMUA_Achr8P04330_001
GSMUA_Achr8P05790_001
GSMUA_Achr8P06150_001
GSMUA_Achr8P28100_001
GSMUA_Achr9P13010_001
GSMUA_Achr9P17280_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G31630.1	GSMUA_Achr4P28260_001	AT1G01530.1	15805477
AT1G31630.1	GSMUA_Achr5P01940_001	AT1G01530.1	15805477
AT1G31630.1	GSMUA_Achr5P01990_001	AT1G01530.1	15805477
AT1G31630.1	GSMUA_Achr4P28260_001	AT1G65360.1	15805477
AT1G31630.1	GSMUA_Achr5P01940_001	AT1G65360.1	15805477
AT1G31630.1	GSMUA_Achr5P01990_001	AT1G65360.1	15805477
AT1G31630.1	GSMUA_Achr10P...	AT1G69120.1	15805477
AT1G31630.1	GSMUA_Achr2P13650_001	AT1G69120.1	15805477
AT1G31630.1	GSMUA_Achr3P02280_001	AT1G69120.1	15805477
AT1G31630.1	GSMUA_Achr3P25280_001	AT1G69120.1	15805477
AT1G31630.1	GSMUA_Achr3P30440_001	AT1G69120.1	15805477
AT1G31630.1	GSMUA_Achr4P23540_001	AT1G69120.1	15805477
AT1G31630.1	GSMUA_Achr6P00050_001	AT1G69120.1	15805477
AT1G31630.1	GSMUA_Achr7P00460_001	AT1G69120.1	15805477
AT1G31630.1	GSMUA_Achr8P04330_001	AT1G69120.1	15805477
AT1G31630.1	GSMUA_Achr2P06250_001	AT2G03710.1	15805477
AT1G31630.1	GSMUA_Achr3P15930_001	AT2G03710.1	15805477
AT1G31630.1	GSMUA_Achr4P14460_001	AT2G03710.1	15805477
AT1G31630.1	GSMUA_Achr7P26700_001	AT2G03710.1	15805477
AT1G31630.1	GSMUA_Achr8P28100_001	AT2G03710.1	15805477
AT1G31630.1	GSMUA_Achr4P28260_001	AT2G24840.1	18713950
AT1G31630.1	GSMUA_Achr5P01940_001	AT2G24840.1	18713950
AT1G31630.1	GSMUA_Achr5P01990_001	AT2G24840.1	18713950
AT1G31630.1	GSMUA_Achr1P00750_001	AT2G45650.1	15805477
AT1G31630.1	GSMUA_Achr2P10250_001	AT2G45650.1	15805477
AT1G31630.1	GSMUA_Achr4P30120_001	AT2G45650.1	15805477
AT1G31630.1	GSMUA_Achr4P28260_001	AT4G36590.1	15805477
AT1G31630.1	GSMUA_Achr5P01940_001	AT4G36590.1	15805477
AT1G31630.1	GSMUA_Achr5P01990_001	AT4G36590.1	15805477
AT1G31630.1	GSMUA_Achr2P18400_001	AT5G27960.1	15805477
AT1G31630.1	GSMUA_Achr2P18410_001	AT5G27960.1	15805477
AT1G31630.1	GSMUA_Achr3P05500_001	AT5G27960.1	15805477
AT1G31630.1	GSMUA_Achr3P08500_001	AT5G27960.1	15805477
AT1G31630.1	GSMUA_Achr3P24560_001	AT5G27960.1	15805477
AT1G31630.1	GSMUA_Achr8P06150_001	AT5G27960.1	15805477
AT1G31630.1	GSMUA_AchrUn_...	AT5G27960.1	15805477
AT1G31630.1	GSMUA_Achr4P28260_001	AT5G60440.1	15805477
AT1G31630.1	GSMUA_Achr5P01940_001	AT5G60440.1	15805477
AT1G31630.1	GSMUA_Achr5P01990_001	AT5G60440.1	15805477
AT1G31640.1	GSMUA_Achr4P28260_001	AT1G65360.1	15805477
AT1G31640.1	GSMUA_Achr5P01940_001	AT1G65360.1	15805477
AT1G31640.1	GSMUA_Achr5P01990_001	AT1G65360.1	15805477
AT1G31640.1	GSMUA_Achr10P...	AT1G69120.1	15805477
AT1G31640.1	GSMUA_Achr2P13650_001	AT1G69120.1	15805477
AT1G31640.1	GSMUA_Achr3P02280_001	AT1G69120.1	15805477
AT1G31640.1	GSMUA_Achr3P25280_001	AT1G69120.1	15805477
AT1G31640.1	GSMUA_Achr3P30440_001	AT1G69120.1	15805477
AT1G31640.1	GSMUA_Achr4P23540_001	AT1G69120.1	15805477
AT1G31640.1	GSMUA_Achr6P00050_001	AT1G69120.1	15805477
AT1G31640.1	GSMUA_Achr7P00460_001	AT1G69120.1	15805477
AT1G31640.1	GSMUA_Achr8P04330_001	AT1G69120.1	15805477
AT1G31640.1	GSMUA_Achr2P06250_001	AT2G03710.1	15805477
AT1G31640.1	GSMUA_Achr3P15930_001	AT2G03710.1	15805477
AT1G31640.1	GSMUA_Achr4P14460_001	AT2G03710.1	15805477
AT1G31640.1	GSMUA_Achr7P26700_001	AT2G03710.1	15805477
AT1G31640.1	GSMUA_Achr8P28100_001	AT2G03710.1	15805477
AT1G31640.1	GSMUA_Achr1P00750_001	AT2G45650.1	15805477
AT1G31640.1	GSMUA_Achr2P10250_001	AT2G45650.1	15805477
AT1G31640.1	GSMUA_Achr4P30120_001	AT2G45650.1	15805477
AT1G31640.1	GSMUA_Achr2P18400_001	AT5G27960.1	15805477
AT1G31640.1	GSMUA_Achr2P18410_001	AT5G27960.1	15805477
AT1G31640.1	GSMUA_Achr3P05500_001	AT5G27960.1	15805477
AT1G31640.1	GSMUA_Achr3P08500_001	AT5G27960.1	15805477
AT1G31640.1	GSMUA_Achr3P24560_001	AT5G27960.1	15805477
AT1G31640.1	GSMUA_Achr8P06150_001	AT5G27960.1	15805477
AT1G31640.1	GSMUA_AchrUn_...	AT5G27960.1	15805477
AT1G31640.1	GSMUA_Achr4P28260_001	AT5G60440.1	15805477
AT1G31640.1	GSMUA_Achr5P01940_001	AT5G60440.1	15805477
AT1G31640.1	GSMUA_Achr5P01990_001	AT5G60440.1	15805477
AT1G65300.1	GSMUA_Achr4P28260_001	AT1G01530.1	15805477
AT1G65300.1	GSMUA_Achr5P01940_001	AT1G01530.1	15805477
AT1G65300.1	GSMUA_Achr5P01990_001	AT1G01530.1	15805477
AT1G65300.1	GSMUA_Achr4P28260_001	AT2G24840.1	18713950
AT1G65300.1	GSMUA_Achr5P01940_001	AT2G24840.1	18713950
AT1G65300.1	GSMUA_Achr5P01990_001	AT2G24840.1	18713950
AT1G65300.1	GSMUA_Achr4P28260_001	AT4G36590.1	15805477
AT1G65300.1	GSMUA_Achr5P01940_001	AT4G36590.1	15805477
AT1G65300.1	GSMUA_Achr5P01990_001	AT4G36590.1	15805477
AT1G65300.1	GSMUA_Achr4P28260_001	AT5G60440.1	15805477
AT1G65300.1	GSMUA_Achr5P01940_001	AT5G60440.1	15805477
AT1G65300.1	GSMUA_Achr5P01990_001	AT5G60440.1	15805477
AT1G65330.1	GSMUA_Achr4P28260_001	AT1G01530.1	15805477
AT1G65330.1	GSMUA_Achr5P01940_001	AT1G01530.1	15805477
AT1G65330.1	GSMUA_Achr5P01990_001	AT1G01530.1	15805477
AT1G65330.1	GSMUA_Achr4P28260_001	AT2G24840.1	18713950
AT1G65330.1	GSMUA_Achr5P01940_001	AT2G24840.1	18713950
AT1G65330.1	GSMUA_Achr5P01990_001	AT2G24840.1	18713950
AT1G65330.1	GSMUA_Achr4P28260_001	AT4G36590.1	15805477
AT1G65330.1	GSMUA_Achr5P01940_001	AT4G36590.1	15805477
AT1G65330.1	GSMUA_Achr5P01990_001	AT4G36590.1	15805477
AT1G65330.1	GSMUA_Achr4P28260_001	AT5G60440.1	15805477
AT1G65330.1	GSMUA_Achr5P01940_001	AT5G60440.1	15805477
AT1G65330.1	GSMUA_Achr5P01990_001	AT5G60440.1	15805477
AT3G05860.1	GSMUA_Achr4P28260_001	AT4G36590.1	15805477
AT3G05860.1	GSMUA_Achr5P01940_001	AT4G36590.1	15805477
AT3G05860.1	GSMUA_Achr5P01990_001	AT4G36590.1	15805477
AT5G26650.1	GSMUA_Achr4P28260_001	AT1G01530.1	15805477
AT5G26650.1	GSMUA_Achr5P01940_001	AT1G01530.1	15805477
AT5G26650.1	GSMUA_Achr5P01990_001	AT1G01530.1	15805477
AT5G26650.1	GSMUA_Achr4P28260_001	AT5G60440.1	15805477
AT5G26650.1	GSMUA_Achr5P01940_001	AT5G60440.1	15805477
AT5G26650.1	GSMUA_Achr5P01990_001	AT5G60440.1	15805477
AT5G27960.1	GSMUA_Achr2P18400_001	AT1G31630.1	15805477
AT5G27960.1	GSMUA_Achr2P18410_001	AT1G31630.1	15805477
AT5G27960.1	GSMUA_Achr3P05500_001	AT1G31630.1	15805477
AT5G27960.1	GSMUA_Achr3P08500_001	AT1G31630.1	15805477
AT5G27960.1	GSMUA_Achr3P24560_001	AT1G31630.1	15805477
AT5G27960.1	GSMUA_Achr8P06150_001	AT1G31630.1	15805477
AT5G27960.1	GSMUA_AchrUn_...	AT1G31630.1	15805477
AT5G27960.1	GSMUA_Achr2P18400_001	AT1G31640.1	15805477
AT5G27960.1	GSMUA_Achr2P18410_001	AT1G31640.1	15805477
AT5G27960.1	GSMUA_Achr3P05500_001	AT1G31640.1	15805477
AT5G27960.1	GSMUA_Achr3P08500_001	AT1G31640.1	15805477
AT5G27960.1	GSMUA_Achr3P24560_001	AT1G31640.1	15805477
AT5G27960.1	GSMUA_Achr8P06150_001	AT1G31640.1	15805477
AT5G27960.1	GSMUA_AchrUn_...	AT1G31640.1	15805477
AT5G27960.1	GSMUA_Achr3P04450_001	AT1G77980.1	15805477
AT5G27960.1	GSMUA_Achr9P13010_001	AT1G77980.1	15805477
AT5G27960.1	GSMUA_Achr4P28260_001	AT4G36590.1	15805477
AT5G27960.1	GSMUA_Achr5P01940_001	AT4G36590.1	15805477
AT5G27960.1	GSMUA_Achr5P01990_001	AT4G36590.1	15805477
AT5G27960.1	GSMUA_Achr4P28260_001	AT5G60440.1	15805477
AT5G27960.1	GSMUA_Achr5P01940_001	AT5G60440.1	15805477
AT5G27960.1	GSMUA_Achr5P01990_001	AT5G60440.1	15805477
AT5G48670.1	GSMUA_Achr4P28260_001	AT2G24840.1	18599653
AT5G48670.1	GSMUA_Achr5P01940_001	AT2G24840.1	18599653
AT5G48670.1	GSMUA_Achr5P01990_001	AT2G24840.1	18599653
AT5G48670.1	GSMUA_Achr4P28260_001	AT2G24840.1	18713950
AT5G48670.1	GSMUA_Achr5P01940_001	AT2G24840.1	18713950
AT5G48670.1	GSMUA_Achr5P01990_001	AT2G24840.1	18713950
AT5G48670.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT5G48670.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT5G48670.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT5G48670.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT5G48670.1	GSMUA_Achr11P...	AT2G41090.1	17360592
AT5G48670.1	GSMUA_Achr2P01120_001	AT2G41090.1	17360592
AT5G48670.1	GSMUA_Achr3P09330_001	AT2G41090.1	17360592
AT5G48670.1	GSMUA_Achr3P25040_001	AT2G41090.1	17360592
AT5G48670.1	GSMUA_Achr5P07820_001	AT2G41090.1	17360592
AT5G48670.1	GSMUA_Achr5P27590_001	AT2G41090.1	17360592
AT5G48670.1	GSMUA_Achr6P15990_001	AT2G41090.1	17360592
AT5G48670.1	GSMUA_Achr6P23670_001	AT2G41090.1	17360592
AT5G48670.1	GSMUA_Achr8P05790_001	AT2G41090.1	17360592
AT5G48670.1	GSMUA_Achr9P17280_001	AT2G41090.1	17360592
AT5G48670.1	GSMUA_Achr10P...	AT2G41100.1	17360592
AT5G48670.1	GSMUA_Achr10P...	AT2G41100.1	17360592
AT5G48670.1	GSMUA_Achr10P...	AT2G41100.1	17360592
AT5G48670.1	GSMUA_Achr10P...	AT2G41100.1	17360592
AT5G48670.1	GSMUA_Achr11P...	AT2G41100.1	17360592
AT5G48670.1	GSMUA_Achr2P01120_001	AT2G41100.1	17360592
AT5G48670.1	GSMUA_Achr3P09330_001	AT2G41100.1	17360592
AT5G48670.1	GSMUA_Achr3P25040_001	AT2G41100.1	17360592
AT5G48670.1	GSMUA_Achr5P07820_001	AT2G41100.1	17360592
AT5G48670.1	GSMUA_Achr5P27590_001	AT2G41100.1	17360592
AT5G48670.1	GSMUA_Achr6P15990_001	AT2G41100.1	17360592
AT5G48670.1	GSMUA_Achr6P23670_001	AT2G41100.1	17360592
AT5G48670.1	GSMUA_Achr8P05790_001	AT2G41100.1	17360592
AT5G48670.1	GSMUA_Achr9P17280_001	AT2G41100.1	17360592
AT5G48670.1	GSMUA_Achr1P04700_001	AT4G14640.1	17360592
AT5G48670.1	GSMUA_Achr1P14070_001	AT4G14640.1	17360592
AT5G48670.1	GSMUA_Achr1P27230_001	AT4G14640.1	17360592
AT5G48670.1	GSMUA_Achr2P12680_001	AT4G14640.1	17360592
AT5G48670.1	GSMUA_Achr3P25390_001	AT4G14640.1	17360592
AT5G48670.1	GSMUA_Achr4P22570_001	AT4G14640.1	17360592
AT5G48670.1	GSMUA_Achr5P09010_001	AT4G14640.1	17360592
AT5G48670.1	GSMUA_Achr6P24410_001	AT4G14640.1	17360592
AT5G48670.1	GSMUA_Achr7P01390_001	AT4G14640.1	17360592
AT5G48670.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT5G48670.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT5G48670.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT5G48670.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT5G48670.1	GSMUA_Achr11P...	AT5G21274.1	17360592
AT5G48670.1	GSMUA_Achr2P01120_001	AT5G21274.1	17360592
AT5G48670.1	GSMUA_Achr3P09330_001	AT5G21274.1	17360592
AT5G48670.1	GSMUA_Achr3P25040_001	AT5G21274.1	17360592
AT5G48670.1	GSMUA_Achr5P07820_001	AT5G21274.1	17360592
AT5G48670.1	GSMUA_Achr5P27590_001	AT5G21274.1	17360592
AT5G48670.1	GSMUA_Achr6P15990_001	AT5G21274.1	17360592
AT5G48670.1	GSMUA_Achr6P23670_001	AT5G21274.1	17360592
AT5G48670.1	GSMUA_Achr8P05790_001	AT5G21274.1	17360592
AT5G48670.1	GSMUA_Achr9P17280_001	AT5G21274.1	17360592
AT5G48670.1	GSMUA_Achr4P28260_001	AT5G60440.1	15805477
AT5G48670.1	GSMUA_Achr5P01940_001	AT5G60440.1	15805477
AT5G48670.1	GSMUA_Achr5P01990_001	AT5G60440.1	15805477

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P18410_001	Banana	nucleus	13.57	73.17
GSMUA_Achr3P08500_001	Banana	nucleus	61.99	59.57
GSMUA_AchrUn_...	Banana	nucleus	54.3	51.5
GSMUA_Achr2P18400_001	Banana	nucleus	52.94	50.43
KRG88863	Soybean	mitochondrion, nucleus	29.41	46.43
VIT_14s0060g00300.t01	Wine grape	nucleus	44.8	41.95
KRG89836	Soybean	nucleus	28.05	41.61
KRG97962	Soybean	nucleus	44.34	41.0
Solyc01g102260.2.1	Tomato	nucleus	46.15	40.96
KRG98150	Soybean	mitochondrion, nucleus	30.77	40.72
AT5G27810.1	Thale cress	cytosol, nucleus, plastid	21.72	40.34
KRH30919	Soybean	nucleus	43.44	39.67
KRH33740	Soybean	nucleus	28.51	39.62
CDY33537	Canola	nucleus	34.39	38.78
GSMUA_Achr3P24560_001	Banana	nucleus	40.27	38.36
KRG98152	Soybean	nucleus	32.13	37.37
KRH66114	Soybean	nucleus	33.03	36.87
KRH72060	Soybean	nucleus	28.05	36.26
KRH30476	Soybean	nucleus	24.43	36.0
KRH30113	Soybean	nucleus	27.15	35.09
Bra024521.1-P	Field mustard	mitochondrion	25.34	34.57
CDY04801	Canola	mitochondrion, nucleus	25.34	34.57
CDY21372	Canola	mitochondrion	25.34	34.57
KRH30119	Soybean	cytosol	24.89	34.16
PGSC0003DMT400086956	Potato	nucleus	22.62	34.01
KRG98149	Soybean	nucleus	32.58	33.8
Bra012335.1-P	Field mustard	mitochondrion	24.43	33.33
CDY25744	Canola	mitochondrion	24.43	33.33
AT1G22590.2	Thale cress	mitochondrion, nucleus	24.43	33.13
Bra005166.1-P	Field mustard	mitochondrion, nucleus	18.55	32.8
GSMUA_Achr8P06150_001	Banana	nucleus	36.2	32.65
PGSC0003DMT400089787	Potato	cytosol	25.34	32.18
KRH30473	Soybean	mitochondrion, nucleus	32.13	32.13
KRH30472	Soybean	nucleus	30.77	32.08
AT5G26630.1	Thale cress	nucleus	30.77	31.19
CDX80580	Canola	nucleus	28.51	31.19
CDY64992	Canola	mitochondrion, nucleus	21.72	31.17
Bra020555.1-P	Field mustard	nucleus	30.32	31.02
CDY05540	Canola	nucleus	30.32	31.02
KRG98148	Soybean	nucleus	32.13	31.0
CDY71896	Canola	nucleus	23.98	30.81
KRH66052	Soybean	mitochondrion, nucleus	31.22	30.67
CDY25000	Canola	nucleus	29.86	30.56
PGSC0003DMT400003073	Potato	cytosol	14.93	30.56
KRG88915	Soybean	mitochondrion, nucleus	28.51	30.43
KRG98143	Soybean	nucleus	28.51	29.86
CDX88234	Canola	nucleus	24.43	29.51
Bra018490.1-P	Field mustard	nucleus	38.01	28.97
CDX97329	Canola	nucleus	38.01	28.97
Bra029469.1-P	Field mustard	nucleus	39.37	28.62
CDY60402	Canola	nucleus	39.37	28.62
Bra009913.1-P	Field mustard	nucleus	26.24	28.57
KRG98142	Soybean	nucleus	34.39	28.46
KRH72066	Soybean	mitochondrion, nucleus	25.79	27.67
KRG98147	Soybean	mitochondrion, nucleus	32.13	27.63
AT5G48670.1	Thale cress	nucleus	39.82	27.41
PGSC0003DMT400089454	Potato	nucleus	28.05	25.31
AT3G05860.1	Thale cress	nucleus	28.96	24.62
KRH30471	Soybean	nucleus	32.13	23.43
CDY27735	Canola	nucleus	28.05	23.22
CDY05207	Canola	nucleus	34.39	22.75
PGSC0003DMT400073719	Potato	nucleus	26.7	22.61
AT1G65330.1	Thale cress	nucleus	28.51	22.58
Bra041022.1-P	Field mustard	nucleus	33.94	22.46
KRG88862	Soybean	nucleus	31.67	22.36
CDY27734	Canola	nucleus	33.94	22.32
AT1G65300.1	Thale cress	nucleus	28.05	22.3
KRG98146	Soybean	nucleus	32.13	21.65
KRG88914	Soybean	cytosol	21.27	21.46
CDX88231	Canola	nucleus	26.7	21.38
PGSC0003DMT400090586	Potato	nucleus	22.62	21.28
PGSC0003DMT400088489	Potato	nucleus	20.36	21.13
PGSC0003DMT400091650	Potato	nucleus	24.43	20.85
CDX80577	Canola	mitochondrion, nucleus	28.05	20.6
AT5G35120.1	Thale cress	cytosol	9.95	20.56
Bra039404.1-P	Field mustard	nucleus	28.05	20.53
CDY38696	Canola	nucleus	25.79	20.5
Bra035448.1-P	Field mustard	nucleus	23.98	20.08
AT5G27960.1	Thale cress	nucleus	28.96	20.0
Bra035449.1-P	Field mustard	nucleus	23.53	19.7
PGSC0003DMT400087890	Potato	cytosol	9.95	19.64
PGSC0003DMT400095062	Potato	nucleus	24.43	19.15
AT1G59930.1	Thale cress	cytosol	11.31	18.94
PGSC0003DMT400088654	Potato	nucleus	27.6	18.65
PGSC0003DMT400090953	Potato	nucleus	28.05	18.45
AT5G26650.1	Thale cress	nucleus	30.32	18.31
PGSC0003DMT400088008	Potato	nucleus	15.84	18.13
CDY18830	Canola	nucleus	28.05	18.02
PGSC0003DMT400095755	Potato	nucleus	28.05	18.02
CDY71564	Canola	nucleus	27.6	17.99
CDY70782	Canola	nucleus	26.24	17.96
AT5G26580.1	Thale cress	nucleus	27.6	17.68
Bra020552.1-P	Field mustard	nucleus	27.15	17.6
AT1G31630.1	Thale cress	mitochondrion	26.7	17.4
Bra009911.1-P	Field mustard	mitochondrion, nucleus	28.05	17.03
AT2G28700.1	Thale cress	nucleus	24.89	16.72
PGSC0003DMT400095426	Potato	mitochondrion	25.79	16.33
PGSC0003DMT400061726	Potato	nucleus	23.98	16.21
PGSC0003DMT400090516	Potato	nucleus	12.67	15.82
PGSC0003DMT400077258	Potato	nucleus	27.6	15.64
PGSC0003DMT400095417	Potato	cytosol	9.05	15.62
CDY05333	Canola	nucleus	26.24	15.38
Bra040248.1-P	Field mustard	nucleus	28.05	15.01
CDY05515	Canola	nucleus	25.34	14.85
Bra020550.1-P	Field mustard	nucleus	25.34	14.74
CDY67043	Canola	nucleus	25.34	14.32
PGSC0003DMT400085256	Potato	nucleus	24.43	14.29
Bra020525.1-P	Field mustard	nucleus	24.89	13.92
PGSC0003DMT400061724	Potato	mitochondrion, nucleus	23.98	13.84
PGSC0003DMT400085623	Potato	nucleus	11.76	13.0
AT1G31640.1	Thale cress	mitochondrion	26.24	12.5
PGSC0003DMT400086447	Potato	cytosol	9.95	11.46
Bra020524.1-P	Field mustard	nucleus	18.55	11.39
CDY05514	Canola	nucleus	18.55	11.39
PGSC0003DMT400086919	Potato	nucleus	12.67	11.38
Solyc07g043080.1.1	Tomato	cytosol	5.43	9.68
CDY05205	Canola	cytosol, mitochondrion, nucleus	6.79	9.2
PGSC0003DMT400085114	Potato	cytosol, endoplasmic reticulum, nucleus	10.41	8.16
PGSC0003DMT400094113	Potato	cytosol	4.52	5.78
PGSC0003DMT400094378	Potato	nucleus	4.07	5.77
PGSC0003DMT400089615	Potato	cytosol	2.26	2.1
PGSC0003DMT400085093	Potato	extracellular, plastid, vacuole	1.81	1.99
PGSC0003DMT400065010	Potato	vacuole	0.9	1.0
PGSC0003DMT400097522	Potato	cytosol, extracellular, mitochondrion, nucleus	0.45	0.85
PGSC0003DMT400061722	Potato	plastid	0.0	0.0
PGSC0003DMT400091747	Potato	plastid	0.0	0.0

Protein Annotations

MapMan:15.5.14	Gene3D:3.40.1810.10	ncoils:Coil	GO:GO:0000982	GO:GO:0000987	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045944	GO:GO:0046983
EnsemblPlantsGene:GSMUA_Achr3G05500_001	EnsemblPlants:GSMUA_Achr3P05500_001	EnsemblPlants:GSMUA_Achr3T05500_001	InterPro:IPR002100	InterPro:IPR036879	UniProt:M0SC18
InterPro:MADS_SRF-like	PFAM:PF00319	PRINTS:PR00404	PFscan:PS50066	PANTHER:PTHR11945	PANTHER:PTHR11945:SF153
SMART:SM00432	SUPFAM:SSF55455	InterPro:TF_MADSbox	InterPro:TF_MADSbox_sf	UniParc:UPI000294C46F	SEG:seg

Description

Putative Agamous-like MADS-box protein AGL80 [Source:GMGC_GENE;Acc:GSMUA_Achr3G05500_001]

Coordinates

chr3:+:3672323..3672988

Molecular Weight (calculated)

25603.2 Da

IEP (calculated)

9.606

GRAVY (calculated)

-0.738

Length

221 amino acids

Sequence
(BLAST)

001: MARKKVKLEW IVNDTARKAT FKKRKKGLMK KVSELSTLCD VKACMIIYGP DEPHADVWPS VPDAMRVLAR LKRLPETEQS KKMMNQEALM RQRIRKLQEQ
101: LQKQDKENRE LETALLMHQC LSGRSLHDVA IEDVTALAWM TEMNMKKVRE RIEDAALKSA EKVKEEKPVA NDKGKTPMSA AATEELPRQD WFAGAMDLSE
201: LMISRNDDHK NTWLNTYYPM D

Best Arabidopsis Sequence Match ( AT5G48670.1 )
(BLAST)

001: MTRKKVKLAY ISNDSSRKAT FKKRKKGLMK KVHELSTLCG ITACAIIYSP YDTNPEVWPS NSGVQRVVSE FRTLPEMDQH KKMVDQEGFL KQRIAKATET
101: LRRQRKDSRE LEMTEVMFQC LIGNMEMFHL NIVDLNDLGY MIEQYLKDVN RRIEILRNSG TEIGESSSVA VAASEGNIPM PNLVATTAPT TTIYEVGSSS
201: SFAAVANFVN PIDLQQFRHP AAQHVGLNEQ PQNLNLNLNQ NYNQNQEWFM EMMNHPEQMR YQTEQMGYQF MDDNHHNHIH HQPQEHQHQI HDESSNALDA
301: ANSSSIIPVT SSSITNKTWF H

Arabidopsis Description

AGL80Agamous-like MADS-box protein AGL80 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJK3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.