Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG88862 | Soybean | nucleus | 73.17 | 76.68 |
| KRH30471 | Soybean | nucleus | 70.73 | 76.57 |
| KRG98147 | Soybean | mitochondrion, nucleus | 53.96 | 68.87 |
| KRG98148 | Soybean | nucleus | 44.21 | 63.32 |
| KRG88863 | Soybean | mitochondrion, nucleus | 25.3 | 59.29 |
| KRH30472 | Soybean | nucleus | 36.28 | 56.13 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 6.4 | 51.22 |
| KRH30473 | Soybean | mitochondrion, nucleus | 34.45 | 51.13 |
| KRG98143 | Soybean | nucleus | 29.27 | 45.5 |
| KRG89836 | Soybean | nucleus | 19.51 | 42.95 |
| KRG98152 | Soybean | nucleus | 24.39 | 42.11 |
| KRH30119 | Soybean | cytosol | 20.43 | 41.61 |
| CDY33537 | Canola | nucleus | 23.78 | 39.8 |
| KRG97962 | Soybean | nucleus | 28.96 | 39.75 |
| KRG98142 | Soybean | nucleus | 32.32 | 39.7 |
| VIT_14s0060g00300.t01 | Wine grape | nucleus | 28.35 | 39.41 |
| KRH30919 | Soybean | nucleus | 28.96 | 39.26 |
| KRH30476 | Soybean | nucleus | 17.68 | 38.67 |
| AT5G27810.1 | Thale cress | cytosol, nucleus, plastid | 14.02 | 38.66 |
| KRH33740 | Soybean | nucleus | 18.6 | 38.36 |
| KRH72060 | Soybean | nucleus | 19.82 | 38.01 |
| KRH30113 | Soybean | nucleus | 19.21 | 36.84 |
| Solyc01g102260.2.1 | Tomato | nucleus | 27.74 | 36.55 |
| KRG98149 | Soybean | nucleus | 23.48 | 36.15 |
| KRH66114 | Soybean | nucleus | 21.04 | 34.85 |
| KRG98150 | Soybean | mitochondrion, nucleus | 17.38 | 34.13 |
| HORVU6Hr1G003730.1 | Barley | nucleus | 8.54 | 32.94 |
| GSMUA_Achr3P05500_001 | Banana | nucleus | 21.65 | 32.13 |
| TraesCS6A01G020500.1 | Wheat | mitochondrion, nucleus | 14.94 | 31.41 |
| KRH66052 | Soybean | mitochondrion, nucleus | 21.34 | 31.11 |
| KRG88915 | Soybean | mitochondrion, nucleus | 19.51 | 30.92 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 21.04 | 30.0 |
| GSMUA_AchrUn_... | Banana | nucleus | 21.04 | 29.61 |
| KRH72066 | Soybean | mitochondrion, nucleus | 18.6 | 29.61 |
| Bra018490.1-P | Field mustard | nucleus | 24.7 | 27.93 |
| CDX97329 | Canola | nucleus | 24.7 | 27.93 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 19.51 | 27.59 |
| OQU83806 | Sorghum | nucleus | 14.63 | 27.43 |
| KXG28892 | Sorghum | nucleus | 15.24 | 27.03 |
| Bra029469.1-P | Field mustard | nucleus | 25.0 | 26.97 |
| CDY60402 | Canola | nucleus | 25.0 | 26.97 |
| TraesCS7B01G484600.1 | Wheat | nucleus | 13.41 | 26.83 |
| KXG28893 | Sorghum | nucleus | 13.41 | 26.19 |
| TraesCS7A01G559500.1 | Wheat | nucleus | 15.24 | 26.18 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 18.29 | 25.86 |
| TraesCS7D01G550500.1 | Wheat | nucleus | 14.33 | 25.41 |
| TraesCS6D01G024000.1 | Wheat | mitochondrion, nucleus | 14.02 | 25.0 |
| AT5G48670.1 | Thale cress | nucleus | 24.09 | 24.61 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 18.29 | 24.49 |
| HORVU7Hr1G121600.1 | Barley | nucleus | 13.72 | 24.32 |
| TraesCS7B01G484000.1 | Wheat | nucleus | 13.72 | 24.32 |
| EES10067 | Sorghum | mitochondrion | 15.24 | 24.27 |
| KRG88914 | Soybean | cytosol | 16.16 | 24.2 |
| TraesCS3B01G159600.1 | Wheat | nucleus | 18.29 | 23.9 |
| TraesCS3D01G138400.1 | Wheat | cytosol | 13.72 | 23.68 |
| TraesCS3B01G155200.1 | Wheat | cytosol | 14.02 | 23.59 |
| TraesCS6B01G028100.1 | Wheat | mitochondrion | 13.41 | 23.4 |
| TraesCS3A01G137500.1 | Wheat | cytosol | 14.02 | 23.12 |
| TraesCS3A01G312600.1 | Wheat | nucleus | 17.68 | 23.11 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 19.51 | 23.02 |
| TraesCS6B01G027900.1 | Wheat | nucleus | 15.85 | 22.91 |
| Os03t0582400-01 | Rice | nucleus | 17.38 | 22.89 |
| Zm00001d016791_P001 | Maize | mitochondrion | 19.82 | 22.65 |
| TraesCS6D01G023800.1 | Wheat | mitochondrion | 15.55 | 22.47 |
| TraesCS6D01G342000.1 | Wheat | nucleus | 16.46 | 22.41 |
| EES06917 | Sorghum | mitochondrion, nucleus | 17.68 | 22.39 |
| HORVU6Hr1G085570.1 | Barley | mitochondrion, nucleus | 17.68 | 22.31 |
| TraesCS6A01G020900.1 | Wheat | mitochondrion | 14.33 | 22.27 |
| TraesCS6B01G028300.1 | Wheat | mitochondrion | 14.33 | 22.27 |
| TraesCS2B01G171700.1 | Wheat | mitochondrion | 12.8 | 21.99 |
| CDY05207 | Canola | nucleus | 22.26 | 21.86 |
| TraesCS6A01G359100.1 | Wheat | mitochondrion | 17.38 | 21.84 |
| TraesCS6B01G391600.1 | Wheat | nucleus | 16.16 | 21.63 |
| TraesCS6B01G391700.1 | Wheat | nucleus | 16.16 | 21.63 |
| KXG28889 | Sorghum | nucleus | 16.46 | 21.6 |
| TraesCS6D01G341700.1 | Wheat | nucleus | 15.85 | 21.58 |
| Bra041022.1-P | Field mustard | nucleus | 21.95 | 21.56 |
| TraesCS6B01G391800.1 | Wheat | mitochondrion | 17.07 | 21.46 |
| TraesCS6D01G342100.1 | Wheat | mitochondrion | 17.07 | 21.46 |
| CDY27734 | Canola | nucleus | 21.95 | 21.43 |
| HORVU6Hr1G085540.1 | Barley | mitochondrion | 14.94 | 21.4 |
| TraesCS6A01G358900.1 | Wheat | nucleus | 15.24 | 21.19 |
| TraesCS6D01G341800.1 | Wheat | mitochondrion, nucleus | 15.85 | 20.97 |
| TraesCS6A01G359700.1 | Wheat | nucleus | 14.33 | 20.7 |
| KXG32310 | Sorghum | nucleus | 15.24 | 20.66 |
| Zm00001d048894_P001 | Maize | mitochondrion | 15.55 | 20.65 |
| OQU83804 | Sorghum | mitochondrion | 14.63 | 20.43 |
| TraesCS7D01G551000.1 | Wheat | nucleus | 14.63 | 20.34 |
| KXG38099 | Sorghum | plastid | 19.51 | 20.32 |
| HORVU2Hr1G022060.1 | Barley | nucleus, plastid | 12.5 | 20.0 |
| TraesCS7D01G548500.1 | Wheat | plastid | 14.33 | 20.0 |
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 14.63 | 19.92 |
| TraesCS7B01G484500.1 | Wheat | nucleus | 14.63 | 19.92 |
| TraesCS7D01G550600.1 | Wheat | nucleus | 14.63 | 19.92 |
| EER91288 | Sorghum | mitochondrion, nucleus | 18.9 | 19.75 |
| TraesCS7A01G561000.1 | Wheat | nucleus | 14.02 | 19.66 |
| TraesCS7B01G485400.1 | Wheat | nucleus | 14.02 | 19.66 |
| KXG28890 | Sorghum | mitochondrion | 15.24 | 19.61 |
| TraesCS6D01G024300.1 | Wheat | mitochondrion | 13.41 | 19.38 |
| KXG28888 | Sorghum | nucleus | 14.94 | 19.22 |
| TraesCS6A01G022700.1 | Wheat | mitochondrion | 12.8 | 18.5 |
| TraesCS2D01G128000.1 | Wheat | nucleus | 11.28 | 17.45 |
| TraesCS7A01G551000.1 | Wheat | nucleus | 15.55 | 16.29 |
| TraesCS7D01G536700.1 | Wheat | nucleus | 15.24 | 15.97 |
| TraesCS6D01G342700.1 | Wheat | nucleus | 14.94 | 15.86 |
| TraesCS6B01G392600.1 | Wheat | nucleus | 14.33 | 15.16 |
| TraesCS7A01G398800.1 | Wheat | nucleus | 14.02 | 14.29 |
| TraesCS7B01G299400.1 | Wheat | nucleus | 14.02 | 14.24 |
| TraesCS7D01G393000.1 | Wheat | nucleus | 13.72 | 13.93 |
| HORVU6Hr1G085670.1 | Barley | nucleus | 12.8 | 12.65 |
| TraesCS2D01G150900.1 | Wheat | mitochondrion | 10.98 | 11.73 |
| TraesCS2B01G146100.1 | Wheat | nucleus | 11.89 | 10.74 |
| TraesCS2A01G146400.1 | Wheat | mitochondrion | 11.59 | 10.67 |
Protein Annotations
| EntrezGene:100794409 | MapMan:15.5.14 | Gene3D:3.40.1810.10 | EMBL:ACUP02010845 | ncoils:Coil | EnsemblPlantsGene:GLYMA_18G053200 |
| GO:GO:0000982 | GO:GO:0000987 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | UniProt:K7MQ37 |
| EnsemblPlants:KRG98146 | ProteinID:KRG98146 | ProteinID:KRG98146.1 | InterPro:MADS_SRF-like | PFAM:PF00319 | PRINTS:PR00404 |
| PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF153 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox |
| InterPro:TF_MADSbox_sf | UniParc:UPI000233E885 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr18:-:4601389..4602375
Molecular Weight (calculated)
37390.0 Da
IEP (calculated)
7.539
GRAVY (calculated)
-0.673
Length
328 amino acids
Sequence
(BLAST)
(BLAST)
001: MATGKLKLTF VANDSQRKTV CKKRKQSLLK KTEELSTLCG IEACAIVYGP NDHRPEIWPS ESGVKNVLGK FMNKPQWEQS KKMMNQESFI AQSIMKSKDK
101: LQKVVKENKE IEMSLFMAQC FQTGMFQPDI NMTAADMNVL SSEIEQNLKD IDKRMEMLKA NQVTPNQPDI ESLTFQPQIM QTSAFQPQIQ IPAFETQIQT
201: QTYQSQMETP TFQPQMQSPA LFQPQIQTAS YQPHMQTQSY HPHMQATSFP TQMQAPSYQP QMQTPAYQPD IQTLAFEPQM QTPAPEEMTL MNYGYGSGMN
301: ANHMHRQKFN GNGYETIMPA FGGAKLPL
101: LQKVVKENKE IEMSLFMAQC FQTGMFQPDI NMTAADMNVL SSEIEQNLKD IDKRMEMLKA NQVTPNQPDI ESLTFQPQIM QTSAFQPQIQ IPAFETQIQT
201: QTYQSQMETP TFQPQMQSPA LFQPQIQTAS YQPHMQTQSY HPHMQATSFP TQMQAPSYQP QMQTPAYQPD IQTLAFEPQM QTPAPEEMTL MNYGYGSGMN
301: ANHMHRQKFN GNGYETIMPA FGGAKLPL
001: MKKVKLSLIA NERSRKTSFI KRKDGIFKKL HELSTLCGVQ ACALIYSPFI PVPESWPSRE GAKKVASRFL EMPPTARTKK MMDQETYLME RITKAKEQLK
101: NLAAENRELQ VRRFMFDCVE GKMSQYHYDA KDLQDLQSCI NLYLDQLNGR IESIKENGES LLSSVSPFPT RIGVDEIGDE SFSDSPIHAT TGVVDTLNAT
201: NPHVLTGDMT PFLDADATAV TASSRFFDHI PYENMNMSQN LHEPFQHLVP TNVCDFFQNQ NMNQVQYQAP NNLFNQIQRE FYNINLNLNL NLNSNQYLNQ
301: QQSFMNPMVE QHMNHVGGRE SIPFVDGNCY NYHQLPSNQL PAVDHASTSY MPSTTGVYDP YINNNL
101: NLAAENRELQ VRRFMFDCVE GKMSQYHYDA KDLQDLQSCI NLYLDQLNGR IESIKENGES LLSSVSPFPT RIGVDEIGDE SFSDSPIHAT TGVVDTLNAT
201: NPHVLTGDMT PFLDADATAV TASSRFFDHI PYENMNMSQN LHEPFQHLVP TNVCDFFQNQ NMNQVQYQAP NNLFNQIQRE FYNINLNLNL NLNSNQYLNQ
301: QQSFMNPMVE QHMNHVGGRE SIPFVDGNCY NYHQLPSNQL PAVDHASTSY MPSTTGVYDP YINNNL
Arabidopsis Description
AGL36Agamous-like MADS-box protein AGL36 [Source:UniProtKB/Swiss-Prot;Acc:Q7XJK6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.