Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH30119 | Soybean | cytosol | 45.38 | 33.54 |
| KRG88863 | Soybean | mitochondrion, nucleus | 38.66 | 32.86 |
| KRG89836 | Soybean | nucleus | 37.82 | 30.2 |
| KRG98152 | Soybean | nucleus | 45.38 | 28.42 |
| AT5G48670.1 | Thale cress | nucleus | 75.63 | 28.04 |
| VIT_14s0060g00300.t01 | Wine grape | nucleus | 52.1 | 26.27 |
| Solyc01g102260.2.1 | Tomato | nucleus | 53.78 | 25.7 |
| KRH30919 | Soybean | nucleus | 52.1 | 25.62 |
| KRG97962 | Soybean | nucleus | 51.26 | 25.52 |
| KRH30476 | Soybean | nucleus | 31.93 | 25.33 |
| Bra029469.1-P | Field mustard | nucleus | 64.71 | 25.33 |
| CDY60402 | Canola | nucleus | 64.71 | 25.33 |
| HORVU6Hr1G003730.1 | Barley | nucleus | 16.81 | 23.53 |
| KRG98150 | Soybean | mitochondrion, nucleus | 32.77 | 23.35 |
| TraesCS3D01G138400.1 | Wheat | cytosol | 36.97 | 23.16 |
| KRH30473 | Soybean | mitochondrion, nucleus | 42.86 | 23.08 |
| KRG98149 | Soybean | nucleus | 40.34 | 22.54 |
| AT5G26630.1 | Thale cress | nucleus | 41.18 | 22.48 |
| KRH30113 | Soybean | nucleus | 31.93 | 22.22 |
| KRH72060 | Soybean | nucleus | 31.93 | 22.22 |
| TraesCS3B01G155200.1 | Wheat | cytosol | 36.13 | 22.05 |
| GSMUA_Achr3P05500_001 | Banana | nucleus | 40.34 | 21.72 |
| KRH30472 | Soybean | nucleus | 38.66 | 21.7 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 41.18 | 21.3 |
| KRH66114 | Soybean | nucleus | 34.45 | 20.71 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 40.34 | 20.69 |
| TraesCS3A01G137500.1 | Wheat | cytosol | 34.45 | 20.6 |
| GSMUA_AchrUn_... | Banana | nucleus | 40.34 | 20.6 |
| KRG98148 | Soybean | nucleus | 39.5 | 20.52 |
| KRG98142 | Soybean | nucleus | 44.54 | 19.85 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 6.72 | 19.51 |
| TraesCS6A01G020500.1 | Wheat | mitochondrion, nucleus | 25.21 | 19.23 |
| AT3G05860.1 | Thale cress | nucleus | 41.18 | 18.85 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 36.13 | 18.53 |
| KRH66052 | Soybean | mitochondrion, nucleus | 34.45 | 18.22 |
| KRG98147 | Soybean | mitochondrion, nucleus | 38.66 | 17.9 |
| KRG88915 | Soybean | mitochondrion, nucleus | 31.09 | 17.87 |
| KXG28893 | Sorghum | nucleus | 25.21 | 17.86 |
| HORVU7Hr1G121600.1 | Barley | nucleus | 27.73 | 17.84 |
| AT1G65300.1 | Thale cress | nucleus | 41.18 | 17.63 |
| AT1G65330.1 | Thale cress | nucleus | 41.18 | 17.56 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 36.13 | 17.55 |
| KRG98143 | Soybean | nucleus | 30.25 | 17.06 |
| AT1G22590.2 | Thale cress | mitochondrion, nucleus | 22.69 | 16.56 |
| Os03t0582400-01 | Rice | nucleus | 34.45 | 16.47 |
| TraesCS7B01G484600.1 | Wheat | nucleus | 22.69 | 16.46 |
| KXG28892 | Sorghum | nucleus | 25.21 | 16.22 |
| OQU83806 | Sorghum | nucleus | 23.53 | 16.0 |
| KRG88914 | Soybean | cytosol | 29.41 | 15.98 |
| TraesCS7A01G561000.1 | Wheat | nucleus | 31.09 | 15.81 |
| TraesCS7D01G548500.1 | Wheat | plastid | 31.09 | 15.74 |
| TraesCS7B01G485400.1 | Wheat | nucleus | 30.25 | 15.38 |
| TraesCS6D01G024000.1 | Wheat | mitochondrion, nucleus | 23.53 | 15.22 |
| EES06917 | Sorghum | mitochondrion, nucleus | 32.77 | 15.06 |
| KRH72066 | Soybean | mitochondrion, nucleus | 26.05 | 15.05 |
| TraesCS6B01G028100.1 | Wheat | mitochondrion | 23.53 | 14.89 |
| KRH30471 | Soybean | nucleus | 37.82 | 14.85 |
| TraesCS7D01G550500.1 | Wheat | nucleus | 22.69 | 14.59 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 33.61 | 14.39 |
| TraesCS7A01G559500.1 | Wheat | nucleus | 22.69 | 14.14 |
| EES10067 | Sorghum | mitochondrion | 24.37 | 14.08 |
| AT5G27960.1 | Thale cress | nucleus | 37.82 | 14.06 |
| TraesCS7B01G484000.1 | Wheat | nucleus | 21.85 | 14.05 |
| KRG98146 | Soybean | nucleus | 38.66 | 14.02 |
| TraesCS3B01G159600.1 | Wheat | nucleus | 29.41 | 13.94 |
| Zm00001d016791_P001 | Maize | mitochondrion | 33.61 | 13.94 |
| KRG88862 | Soybean | nucleus | 36.13 | 13.74 |
| TraesCS6D01G341700.1 | Wheat | nucleus | 27.73 | 13.69 |
| TraesCS6B01G027900.1 | Wheat | nucleus | 26.05 | 13.66 |
| TraesCS3A01G312600.1 | Wheat | nucleus | 28.57 | 13.55 |
| TraesCS6D01G341800.1 | Wheat | mitochondrion, nucleus | 27.73 | 13.31 |
| TraesCS6D01G342000.1 | Wheat | nucleus | 26.89 | 13.28 |
| TraesCS6A01G358900.1 | Wheat | nucleus | 26.05 | 13.14 |
| HORVU6Hr1G085540.1 | Barley | mitochondrion | 25.21 | 13.1 |
| TraesCS2B01G171700.1 | Wheat | mitochondrion | 21.01 | 13.09 |
| AT5G35120.1 | Thale cress | cytosol | 11.76 | 13.08 |
| TraesCS6B01G391600.1 | Wheat | nucleus | 26.89 | 13.06 |
| TraesCS6B01G391700.1 | Wheat | nucleus | 26.89 | 13.06 |
| TraesCS6A01G020900.1 | Wheat | mitochondrion | 22.69 | 12.8 |
| TraesCS6B01G028300.1 | Wheat | mitochondrion | 22.69 | 12.8 |
| TraesCS6D01G023800.1 | Wheat | mitochondrion | 24.37 | 12.78 |
| KXG38099 | Sorghum | plastid | 33.61 | 12.7 |
| AT1G31630.1 | Thale cress | mitochondrion | 36.13 | 12.68 |
| AT5G26650.1 | Thale cress | nucleus | 38.66 | 12.57 |
| OQU83804 | Sorghum | mitochondrion | 24.37 | 12.34 |
| HORVU6Hr1G085570.1 | Barley | mitochondrion, nucleus | 26.89 | 12.31 |
| TraesCS2D01G128000.1 | Wheat | nucleus | 21.85 | 12.26 |
| TraesCS6A01G359100.1 | Wheat | mitochondrion | 26.89 | 12.26 |
| TraesCS6B01G391800.1 | Wheat | mitochondrion | 26.89 | 12.26 |
| TraesCS6D01G342100.1 | Wheat | mitochondrion | 26.89 | 12.26 |
| HORVU2Hr1G022060.1 | Barley | nucleus, plastid | 21.01 | 12.2 |
| EER91288 | Sorghum | mitochondrion, nucleus | 31.93 | 12.1 |
| KXG32310 | Sorghum | nucleus | 24.37 | 11.98 |
| AT2G28700.1 | Thale cress | nucleus | 32.77 | 11.85 |
| KXG28888 | Sorghum | nucleus | 25.21 | 11.76 |
| KXG28890 | Sorghum | mitochondrion | 25.21 | 11.76 |
| KXG28889 | Sorghum | nucleus | 24.37 | 11.6 |
| TraesCS6A01G022700.1 | Wheat | mitochondrion | 21.85 | 11.45 |
| TraesCS7D01G551000.1 | Wheat | nucleus | 22.69 | 11.44 |
| AT1G59930.1 | Thale cress | cytosol | 12.61 | 11.36 |
| Zm00001d048894_P001 | Maize | mitochondrion | 23.53 | 11.34 |
| TraesCS6A01G359700.1 | Wheat | nucleus | 21.01 | 11.01 |
| TraesCS6D01G024300.1 | Wheat | mitochondrion | 21.01 | 11.01 |
| TraesCS7A01G551000.1 | Wheat | nucleus | 28.57 | 10.86 |
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 21.85 | 10.79 |
| TraesCS7D01G550600.1 | Wheat | nucleus | 21.85 | 10.79 |
| TraesCS7D01G536700.1 | Wheat | nucleus | 27.73 | 10.54 |
| AT5G26580.1 | Thale cress | nucleus | 30.25 | 10.43 |
| TraesCS7B01G484500.1 | Wheat | nucleus | 21.01 | 10.37 |
| AT1G31640.1 | Thale cress | mitochondrion | 35.29 | 9.05 |
| TraesCS6D01G342700.1 | Wheat | nucleus | 22.69 | 8.74 |
| TraesCS2D01G150900.1 | Wheat | mitochondrion | 21.01 | 8.14 |
| TraesCS6B01G392600.1 | Wheat | nucleus | 21.01 | 8.06 |
| TraesCS7D01G393000.1 | Wheat | nucleus | 21.85 | 8.05 |
| TraesCS2A01G146400.1 | Wheat | mitochondrion | 23.53 | 7.87 |
| TraesCS7A01G398800.1 | Wheat | nucleus | 21.01 | 7.76 |
| TraesCS7B01G299400.1 | Wheat | nucleus | 21.01 | 7.74 |
| HORVU6Hr1G085670.1 | Barley | nucleus | 21.01 | 7.53 |
| TraesCS2B01G146100.1 | Wheat | nucleus | 21.01 | 6.89 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EntrezGene:832843 | ProteinID:AED93727.1 | ArrayExpress:AT5G27810 | EnsemblPlantsGene:AT5G27810 |
| RefSeq:AT5G27810 | TAIR:AT5G27810 | RefSeq:AT5G27810-TAIR-G | EnsemblPlants:AT5G27810.1 | TAIR:AT5G27810.1 | EMBL:BT030070 |
| GO:GO:0000982 | GO:GO:0000987 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | InterPro:MADS_SRF-like |
| RefSeq:NP_198133.1 | PFAM:PF00319 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF355 | UniProt:Q3E8Z9 | SUPFAM:SSF55455 |
| InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI0000162610 | : | : | : |
Description
At5g27810 [Source:UniProtKB/TrEMBL;Acc:Q3E8Z9]
Coordinates
chr5:+:9855671..9856458
Molecular Weight (calculated)
13849.6 Da
IEP (calculated)
5.707
GRAVY (calculated)
-0.753
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKVHELSTL CGITSCAIIY SPYDTSHEVW PSNSGVQRVV SEFRTLPEMD QHKKMVDQEG FLKQRIAKPT ENLRRQRKDN KELEMTEVMF RCLIGNMEML
101: KSESQSESTT MVYENDEPS
101: KSESQSESTT MVYENDEPS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.