Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 4
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 71.75 | 81.3 |
| Zm00001d016791_P001 | Maize | mitochondrion | 69.84 | 76.66 |
| EER91288 | Sorghum | mitochondrion, nucleus | 73.02 | 73.25 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 9.21 | 70.73 |
| EES06917 | Sorghum | mitochondrion, nucleus | 47.94 | 58.3 |
| TraesCS6A01G020500.1 | Wheat | mitochondrion, nucleus | 25.08 | 50.64 |
| HORVU6Hr1G003730.1 | Barley | nucleus | 13.33 | 49.41 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 35.87 | 49.13 |
| TraesCS3A01G312600.1 | Wheat | nucleus | 39.05 | 49.0 |
| TraesCS6A01G359100.1 | Wheat | mitochondrion | 38.41 | 46.36 |
| TraesCS6D01G342100.1 | Wheat | mitochondrion | 38.41 | 46.36 |
| TraesCS3B01G159600.1 | Wheat | nucleus | 36.83 | 46.22 |
| HORVU7Hr1G121600.1 | Barley | nucleus | 26.98 | 45.95 |
| TraesCS6D01G342000.1 | Wheat | nucleus | 34.6 | 45.23 |
| HORVU6Hr1G085570.1 | Barley | mitochondrion, nucleus | 37.14 | 45.0 |
| KXG28892 | Sorghum | nucleus | 26.35 | 44.86 |
| TraesCS6B01G391800.1 | Wheat | mitochondrion | 37.14 | 44.83 |
| TraesCS7B01G484600.1 | Wheat | nucleus | 23.17 | 44.51 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 32.38 | 43.97 |
| TraesCS6B01G391600.1 | Wheat | nucleus | 33.97 | 43.67 |
| TraesCS6B01G391700.1 | Wheat | nucleus | 33.97 | 43.67 |
| HORVU6Hr1G085540.1 | Barley | mitochondrion | 31.75 | 43.67 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.06 | 43.35 |
| TraesCS6D01G341700.1 | Wheat | nucleus | 33.02 | 43.15 |
| OQU83806 | Sorghum | nucleus | 23.81 | 42.86 |
| TraesCS6D01G024000.1 | Wheat | mitochondrion, nucleus | 24.76 | 42.39 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 31.11 | 42.24 |
| EES10067 | Sorghum | mitochondrion | 27.62 | 42.23 |
| TraesCS6A01G358900.1 | Wheat | nucleus | 31.43 | 41.95 |
| TraesCS6B01G027900.1 | Wheat | nucleus | 30.16 | 41.85 |
| TraesCS6D01G023800.1 | Wheat | mitochondrion | 30.16 | 41.85 |
| TraesCS7D01G551000.1 | Wheat | nucleus | 31.11 | 41.53 |
| TraesCS6B01G028100.1 | Wheat | mitochondrion | 24.76 | 41.49 |
| TraesCS7D01G550500.1 | Wheat | nucleus | 24.13 | 41.08 |
| KRG88863 | Soybean | mitochondrion, nucleus | 18.1 | 40.71 |
| TraesCS7B01G484000.1 | Wheat | nucleus | 23.49 | 40.0 |
| KXG28893 | Sorghum | nucleus | 21.27 | 39.88 |
| TraesCS6B01G028300.1 | Wheat | mitochondrion | 26.67 | 39.81 |
| TraesCS7B01G484500.1 | Wheat | nucleus | 30.16 | 39.42 |
| TraesCS7D01G550600.1 | Wheat | nucleus | 30.16 | 39.42 |
| TraesCS2B01G171700.1 | Wheat | mitochondrion | 23.81 | 39.27 |
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 29.84 | 39.0 |
| KRG89836 | Soybean | nucleus | 18.41 | 38.93 |
| TraesCS7A01G559500.1 | Wheat | nucleus | 23.49 | 38.74 |
| KXG28890 | Sorghum | mitochondrion | 31.11 | 38.43 |
| TraesCS6A01G020900.1 | Wheat | mitochondrion | 25.71 | 38.39 |
| TraesCS6D01G341800.1 | Wheat | mitochondrion, nucleus | 30.16 | 38.31 |
| TraesCS2D01G128000.1 | Wheat | nucleus | 25.4 | 37.74 |
| VIT_14s0060g00300.t01 | Wine grape | nucleus | 28.25 | 37.71 |
| OQU83804 | Sorghum | mitochondrion | 27.94 | 37.45 |
| KXG28888 | Sorghum | nucleus | 30.16 | 37.25 |
| KXG28889 | Sorghum | nucleus | 29.21 | 36.8 |
| Solyc01g102260.2.1 | Tomato | nucleus | 28.89 | 36.55 |
| KRG97962 | Soybean | nucleus | 27.62 | 36.4 |
| KRH30919 | Soybean | nucleus | 27.62 | 35.95 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 27.94 | 35.92 |
| Bra024521.1-P | Field mustard | mitochondrion | 18.41 | 35.8 |
| CDY04801 | Canola | mitochondrion, nucleus | 18.41 | 35.8 |
| CDY21372 | Canola | mitochondrion | 18.41 | 35.8 |
| HORVU2Hr1G022060.1 | Barley | nucleus, plastid | 23.17 | 35.61 |
| KRH33740 | Soybean | nucleus | 17.78 | 35.22 |
| TraesCS6A01G022700.1 | Wheat | mitochondrion | 25.08 | 34.8 |
| TraesCS6D01G024300.1 | Wheat | mitochondrion | 25.08 | 34.8 |
| TraesCS7D01G536700.1 | Wheat | nucleus | 34.29 | 34.5 |
| KRH30476 | Soybean | nucleus | 16.19 | 34.0 |
| TraesCS7A01G551000.1 | Wheat | nucleus | 33.65 | 33.87 |
| CDY33537 | Canola | nucleus | 20.95 | 33.67 |
| AT5G27810.1 | Thale cress | cytosol, nucleus, plastid | 12.7 | 33.61 |
| KXG32310 | Sorghum | nucleus | 25.4 | 33.06 |
| KRG98150 | Soybean | mitochondrion, nucleus | 17.46 | 32.93 |
| Bra012335.1-P | Field mustard | mitochondrion | 16.83 | 32.72 |
| CDY25744 | Canola | mitochondrion | 16.83 | 32.72 |
| PGSC0003DMT400086956 | Potato | nucleus | 15.24 | 32.65 |
| AT1G22590.2 | Thale cress | mitochondrion, nucleus | 16.83 | 32.52 |
| KRH66114 | Soybean | nucleus | 20.32 | 32.32 |
| KRH30473 | Soybean | mitochondrion, nucleus | 22.54 | 32.13 |
| AT5G26630.1 | Thale cress | nucleus | 22.22 | 32.11 |
| KRG98152 | Soybean | nucleus | 19.37 | 32.11 |
| KRG98149 | Soybean | nucleus | 21.59 | 31.92 |
| PGSC0003DMT400089787 | Potato | cytosol | 17.46 | 31.61 |
| KRH30113 | Soybean | nucleus | 17.14 | 31.58 |
| TraesCS7B01G299400.1 | Wheat | nucleus | 32.06 | 31.27 |
| TraesCS7D01G393000.1 | Wheat | nucleus | 32.06 | 31.27 |
| Bra005166.1-P | Field mustard | mitochondrion, nucleus | 12.38 | 31.2 |
| KRH72060 | Soybean | nucleus | 16.83 | 30.99 |
| CDX80580 | Canola | nucleus | 19.68 | 30.69 |
| KRH30472 | Soybean | nucleus | 20.63 | 30.66 |
| KRG98148 | Soybean | nucleus | 21.9 | 30.13 |
| KRH30119 | Soybean | cytosol | 15.24 | 29.81 |
| TraesCS7A01G398800.1 | Wheat | nucleus | 30.48 | 29.81 |
| CDY71896 | Canola | nucleus | 16.19 | 29.65 |
| KRG98143 | Soybean | nucleus | 19.68 | 29.38 |
| CDY64992 | Canola | mitochondrion, nucleus | 14.29 | 29.22 |
| CDX88234 | Canola | nucleus | 16.83 | 28.96 |
| Bra020555.1-P | Field mustard | nucleus | 19.68 | 28.7 |
| CDY05540 | Canola | nucleus | 19.68 | 28.7 |
| CDY25000 | Canola | nucleus | 19.68 | 28.7 |
| TraesCS6A01G359700.1 | Wheat | nucleus | 20.63 | 28.63 |
| KRH66052 | Soybean | mitochondrion, nucleus | 20.0 | 28.0 |
| KRG98142 | Soybean | nucleus | 23.49 | 27.72 |
| Bra009913.1-P | Field mustard | nucleus | 17.78 | 27.59 |
| KRG88915 | Soybean | mitochondrion, nucleus | 18.1 | 27.54 |
| TraesCS6D01G342700.1 | Wheat | nucleus | 26.98 | 27.51 |
| KRG98147 | Soybean | mitochondrion, nucleus | 22.22 | 27.24 |
| TraesCS6B01G392600.1 | Wheat | nucleus | 26.35 | 26.77 |
| PGSC0003DMT400089454 | Potato | nucleus | 20.32 | 26.12 |
| Bra029469.1-P | Field mustard | nucleus | 25.08 | 25.99 |
| CDY60402 | Canola | nucleus | 25.08 | 25.99 |
| PGSC0003DMT400003073 | Potato | cytosol | 8.89 | 25.93 |
| KRH72066 | Soybean | mitochondrion, nucleus | 16.51 | 25.24 |
| Bra018490.1-P | Field mustard | nucleus | 22.86 | 24.83 |
| CDX97329 | Canola | nucleus | 22.86 | 24.83 |
| TraesCS2D01G150900.1 | Wheat | mitochondrion | 23.81 | 24.43 |
| AT3G05860.1 | Thale cress | nucleus | 20.0 | 24.23 |
| HORVU6Hr1G085670.1 | Barley | nucleus | 25.4 | 24.1 |
| AT5G48670.1 | Thale cress | nucleus | 24.13 | 23.68 |
| AT1G65330.1 | Thale cress | nucleus | 20.63 | 23.3 |
| TraesCS2B01G146100.1 | Wheat | nucleus | 26.67 | 23.14 |
| AT1G65300.1 | Thale cress | nucleus | 20.32 | 23.02 |
| PGSC0003DMT400088489 | Potato | nucleus | 15.56 | 23.0 |
| PGSC0003DMT400073719 | Potato | nucleus | 19.05 | 22.99 |
| CDY27735 | Canola | nucleus | 19.37 | 22.85 |
| AT5G35120.1 | Thale cress | cytosol | 7.62 | 22.43 |
| PGSC0003DMT400091650 | Potato | nucleus | 17.78 | 21.62 |
| Bra041022.1-P | Field mustard | nucleus | 22.86 | 21.56 |
| CDY05207 | Canola | nucleus | 22.86 | 21.56 |
| KRH30471 | Soybean | nucleus | 20.63 | 21.45 |
| CDY27734 | Canola | nucleus | 22.86 | 21.43 |
| PGSC0003DMT400090586 | Potato | nucleus | 15.87 | 21.28 |
| Bra039404.1-P | Field mustard | nucleus | 20.32 | 21.19 |
| PGSC0003DMT400088654 | Potato | nucleus | 21.59 | 20.8 |
| TraesCS2A01G146400.1 | Wheat | mitochondrion | 23.49 | 20.79 |
| PGSC0003DMT400090953 | Potato | nucleus | 21.9 | 20.54 |
| CDX88231 | Canola | nucleus | 17.78 | 20.29 |
| KRG88862 | Soybean | nucleus | 20.0 | 20.13 |
| KRG88914 | Soybean | cytosol | 13.97 | 20.09 |
| CDX80577 | Canola | mitochondrion, nucleus | 19.05 | 19.93 |
| PGSC0003DMT400090516 | Potato | nucleus | 11.11 | 19.77 |
| KRG98146 | Soybean | nucleus | 20.32 | 19.51 |
| PGSC0003DMT400095062 | Potato | nucleus | 17.46 | 19.5 |
| AT5G27960.1 | Thale cress | nucleus | 19.68 | 19.38 |
| PGSC0003DMT400095755 | Potato | nucleus | 20.95 | 19.19 |
| PGSC0003DMT400088008 | Potato | nucleus | 11.75 | 19.17 |
| CDY38696 | Canola | nucleus | 16.83 | 19.06 |
| AT1G59930.1 | Thale cress | cytosol | 7.94 | 18.94 |
| Bra035448.1-P | Field mustard | nucleus | 15.87 | 18.94 |
| Bra035449.1-P | Field mustard | nucleus | 15.87 | 18.94 |
| AT2G28700.1 | Thale cress | nucleus | 19.68 | 18.84 |
| CDY18830 | Canola | nucleus | 19.68 | 18.02 |
| CDY71564 | Canola | nucleus | 19.37 | 17.99 |
| AT5G26650.1 | Thale cress | nucleus | 20.63 | 17.76 |
| PGSC0003DMT400077258 | Potato | nucleus | 21.59 | 17.44 |
| AT1G31630.1 | Thale cress | mitochondrion | 18.73 | 17.4 |
| Bra009911.1-P | Field mustard | mitochondrion, nucleus | 20.0 | 17.31 |
| CDY70782 | Canola | nucleus | 17.46 | 17.03 |
| Bra020552.1-P | Field mustard | nucleus | 18.41 | 17.01 |
| PGSC0003DMT400087890 | Potato | cytosol | 6.03 | 16.96 |
| PGSC0003DMT400095426 | Potato | mitochondrion | 18.73 | 16.91 |
| PGSC0003DMT400061726 | Potato | nucleus | 17.46 | 16.82 |
| AT5G26580.1 | Thale cress | nucleus | 18.41 | 16.81 |
| PGSC0003DMT400061724 | Potato | mitochondrion, nucleus | 19.37 | 15.93 |
| PGSC0003DMT400085256 | Potato | nucleus | 18.41 | 15.34 |
| Bra040248.1-P | Field mustard | nucleus | 20.0 | 15.25 |
| Bra020550.1-P | Field mustard | nucleus | 18.1 | 15.0 |
| CDY05333 | Canola | nucleus | 17.78 | 14.85 |
| CDY67043 | Canola | nucleus | 18.1 | 14.58 |
| PGSC0003DMT400085623 | Potato | nucleus | 9.21 | 14.5 |
| CDY05515 | Canola | nucleus | 17.14 | 14.32 |
| PGSC0003DMT400095417 | Potato | cytosol | 5.71 | 14.06 |
| Bra020525.1-P | Field mustard | nucleus | 17.14 | 13.67 |
| PGSC0003DMT400086919 | Potato | nucleus | 10.16 | 13.01 |
| Bra020524.1-P | Field mustard | nucleus | 14.6 | 12.78 |
| CDY05514 | Canola | nucleus | 14.6 | 12.78 |
| AT1G31640.1 | Thale cress | mitochondrion | 18.73 | 12.72 |
| Solyc07g043080.1.1 | Tomato | cytosol | 4.13 | 10.48 |
| PGSC0003DMT400086447 | Potato | cytosol | 6.35 | 10.42 |
| PGSC0003DMT400085114 | Potato | cytosol, endoplasmic reticulum, nucleus | 8.89 | 9.93 |
| PGSC0003DMT400094113 | Potato | cytosol | 5.4 | 9.83 |
| PGSC0003DMT400094378 | Potato | nucleus | 4.76 | 9.62 |
| CDY05205 | Canola | cytosol, mitochondrion, nucleus | 4.76 | 9.2 |
| PGSC0003DMT400097522 | Potato | cytosol, extracellular, mitochondrion, nucleus | 2.86 | 7.69 |
| PGSC0003DMT400089615 | Potato | cytosol | 5.71 | 7.56 |
| PGSC0003DMT400091747 | Potato | plastid | 3.17 | 6.58 |
| PGSC0003DMT400085093 | Potato | extracellular, plastid, vacuole | 3.81 | 5.97 |
| PGSC0003DMT400061722 | Potato | plastid | 1.9 | 5.77 |
| PGSC0003DMT400065010 | Potato | vacuole | 3.49 | 5.5 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | UniProt:A0A1B6QJL9 | ncoils:Coil | GO:GO:0000982 | GO:GO:0000987 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 |
| GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | EnsemblPlants:KXG38099 | ProteinID:KXG38099 | ProteinID:KXG38099.1 |
| InterPro:MADS_SRF-like | PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF153 |
| SMART:SM00432 | EnsemblPlantsGene:SORBI_3001G180400 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI00081AB938 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:15302275..15303528
Molecular Weight (calculated)
33642.6 Da
IEP (calculated)
9.491
GRAVY (calculated)
-0.268
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTISVPPFP SKILHVVAAA AMARKKVTLQ WIANDATRRA TFKKRRKGLM KKASELATLC DVDACVVVYG EGETQPEVWP DVAKAAQVLA RFKAMPELDQ
101: CKKMMDMEGF LTQRIDKLKE QLHKAQRENR ERETTLLLHD AIVGRRPSLV GLSVEDIAGL GWMVENRLVG VKESLERHHH QVQAAGGKQP QGGHQGNAVV
201: PPPTLQLQMP PQVSLQPLMP YNIGGGPAGQ TDGVHHQAPP HPQASSWLME VARAGGDLGA LVYSGFSGGR GSFGGSAGAG TSTSAVAADM LPHLGNFGAG
301: FGWSDPAGPS SFPPM
101: CKKMMDMEGF LTQRIDKLKE QLHKAQRENR ERETTLLLHD AIVGRRPSLV GLSVEDIAGL GWMVENRLVG VKESLERHHH QVQAAGGKQP QGGHQGNAVV
201: PPPTLQLQMP PQVSLQPLMP YNIGGGPAGQ TDGVHHQAPP HPQASSWLME VARAGGDLGA LVYSGFSGGR GSFGGSAGAG TSTSAVAADM LPHLGNFGAG
301: FGWSDPAGPS SFPPM
001: MTRKKVKLAY ISNDSSRKAT FKKRKKGLMK KVHELSTLCG ITACAIIYSP YDTNPEVWPS NSGVQRVVSE FRTLPEMDQH KKMVDQEGFL KQRIAKATET
101: LRRQRKDSRE LEMTEVMFQC LIGNMEMFHL NIVDLNDLGY MIEQYLKDVN RRIEILRNSG TEIGESSSVA VAASEGNIPM PNLVATTAPT TTIYEVGSSS
201: SFAAVANFVN PIDLQQFRHP AAQHVGLNEQ PQNLNLNLNQ NYNQNQEWFM EMMNHPEQMR YQTEQMGYQF MDDNHHNHIH HQPQEHQHQI HDESSNALDA
301: ANSSSIIPVT SSSITNKTWF H
101: LRRQRKDSRE LEMTEVMFQC LIGNMEMFHL NIVDLNDLGY MIEQYLKDVN RRIEILRNSG TEIGESSSVA VAASEGNIPM PNLVATTAPT TTIYEVGSSS
201: SFAAVANFVN PIDLQQFRHP AAQHVGLNEQ PQNLNLNLNQ NYNQNQEWFM EMMNHPEQMR YQTEQMGYQF MDDNHHNHIH HQPQEHQHQI HDESSNALDA
301: ANSSSIIPVT SSSITNKTWF H
Arabidopsis Description
AGL80Agamous-like MADS-box protein AGL80 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJK3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.