Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020552.1-P | Field mustard | nucleus | 95.87 | 95.31 |
| CDY70782 | Canola | nucleus | 82.3 | 86.38 |
| CDY71896 | Canola | nucleus | 39.82 | 78.49 |
| CDY67043 | Canola | nucleus | 86.14 | 74.68 |
| CDY05333 | Canola | nucleus | 64.6 | 58.09 |
| CDY05515 | Canola | nucleus | 64.6 | 58.09 |
| CDY05514 | Canola | nucleus | 58.41 | 55.0 |
| CDX80577 | Canola | mitochondrion, nucleus | 41.3 | 46.51 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 5.6 | 46.34 |
| CDX88231 | Canola | nucleus | 36.28 | 44.57 |
| AT5G27960.1 | Thale cress | nucleus | 32.15 | 34.06 |
| AT1G65330.1 | Thale cress | nucleus | 28.02 | 34.05 |
| AT1G65300.1 | Thale cress | nucleus | 27.43 | 33.45 |
| AT5G35120.1 | Thale cress | cytosol | 10.32 | 32.71 |
| CDY05540 | Canola | nucleus | 20.35 | 31.94 |
| CDY25000 | Canola | nucleus | 20.06 | 31.48 |
| AT5G26650.1 | Thale cress | nucleus | 33.63 | 31.15 |
| CDX88234 | Canola | nucleus | 16.81 | 31.15 |
| AT1G59930.1 | Thale cress | cytosol | 12.09 | 31.06 |
| HORVU6Hr1G003730.1 | Barley | nucleus | 7.67 | 30.59 |
| CDY64992 | Canola | mitochondrion, nucleus | 13.27 | 29.22 |
| CDY33537 | Canola | nucleus | 16.81 | 29.08 |
| AT5G26580.1 | Thale cress | nucleus | 29.5 | 28.99 |
| TraesCS3D01G138400.1 | Wheat | cytosol | 16.22 | 28.95 |
| TraesCS6A01G020500.1 | Wheat | mitochondrion, nucleus | 13.27 | 28.85 |
| CDX80580 | Canola | nucleus | 17.11 | 28.71 |
| TraesCS3B01G155200.1 | Wheat | cytosol | 16.22 | 28.21 |
| AT1G31630.1 | Thale cress | mitochondrion | 28.02 | 28.02 |
| KXG28893 | Sorghum | nucleus | 13.86 | 27.98 |
| GSMUA_Achr3P05500_001 | Banana | nucleus | 17.99 | 27.6 |
| KXG28892 | Sorghum | nucleus | 14.75 | 27.03 |
| TraesCS3A01G137500.1 | Wheat | cytosol | 15.63 | 26.63 |
| CDY21372 | Canola | mitochondrion | 12.68 | 26.54 |
| CDY25744 | Canola | mitochondrion | 12.68 | 26.54 |
| OQU83806 | Sorghum | nucleus | 13.57 | 26.29 |
| CDY04801 | Canola | mitochondrion, nucleus | 12.39 | 25.93 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 17.7 | 25.86 |
| HORVU7Hr1G121600.1 | Barley | nucleus | 13.86 | 25.41 |
| EES10067 | Sorghum | mitochondrion | 15.34 | 25.24 |
| TraesCS6D01G024000.1 | Wheat | mitochondrion, nucleus | 13.57 | 25.0 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 16.52 | 24.35 |
| EES06917 | Sorghum | mitochondrion, nucleus | 18.58 | 24.32 |
| CDY05207 | Canola | nucleus | 23.89 | 24.25 |
| KXG32310 | Sorghum | nucleus | 17.11 | 23.97 |
| TraesCS7B01G484600.1 | Wheat | nucleus | 11.5 | 23.78 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 16.22 | 23.71 |
| GSMUA_AchrUn_... | Banana | nucleus | 16.22 | 23.61 |
| HORVU6Hr1G085540.1 | Barley | mitochondrion | 15.93 | 23.58 |
| CDY60402 | Canola | nucleus | 20.94 | 23.36 |
| CDY27735 | Canola | nucleus | 18.29 | 23.22 |
| KXG28889 | Sorghum | nucleus | 17.11 | 23.2 |
| PGSC0003DMT400003073 | Potato | cytosol | 7.37 | 23.15 |
| CDX97329 | Canola | nucleus | 19.76 | 23.1 |
| HORVU2Hr1G022060.1 | Barley | nucleus, plastid | 13.86 | 22.93 |
| TraesCS6B01G027900.1 | Wheat | nucleus | 15.34 | 22.91 |
| TraesCS6B01G391600.1 | Wheat | nucleus | 16.52 | 22.86 |
| TraesCS6B01G391700.1 | Wheat | nucleus | 16.52 | 22.86 |
| TraesCS6A01G020900.1 | Wheat | mitochondrion | 14.16 | 22.75 |
| TraesCS7D01G550500.1 | Wheat | nucleus | 12.39 | 22.7 |
| TraesCS6D01G023800.1 | Wheat | mitochondrion | 15.04 | 22.47 |
| TraesCS6D01G342000.1 | Wheat | nucleus | 15.93 | 22.41 |
| TraesCS6B01G028100.1 | Wheat | mitochondrion | 12.39 | 22.34 |
| CDY27734 | Canola | nucleus | 22.12 | 22.32 |
| Zm00001d048894_P001 | Maize | mitochondrion | 16.22 | 22.27 |
| TraesCS7D01G548500.1 | Wheat | plastid | 15.34 | 22.13 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 15.93 | 22.04 |
| TraesCS2B01G171700.1 | Wheat | mitochondrion | 12.39 | 21.99 |
| TraesCS6B01G028300.1 | Wheat | mitochondrion | 13.57 | 21.8 |
| TraesCS7A01G561000.1 | Wheat | nucleus | 15.04 | 21.79 |
| TraesCS6A01G022700.1 | Wheat | mitochondrion | 14.45 | 21.59 |
| TraesCS6D01G024300.1 | Wheat | mitochondrion | 14.45 | 21.59 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 17.7 | 21.58 |
| TraesCS6D01G341700.1 | Wheat | nucleus | 15.34 | 21.58 |
| TraesCS3A01G312600.1 | Wheat | nucleus | 15.93 | 21.51 |
| TraesCS7B01G485400.1 | Wheat | nucleus | 14.75 | 21.37 |
| OQU83804 | Sorghum | mitochondrion | 14.75 | 21.28 |
| TraesCS6A01G358900.1 | Wheat | nucleus | 14.75 | 21.19 |
| TraesCS3B01G159600.1 | Wheat | nucleus | 15.63 | 21.12 |
| TraesCS7B01G484000.1 | Wheat | nucleus | 11.5 | 21.08 |
| TraesCS6D01G341800.1 | Wheat | mitochondrion, nucleus | 15.34 | 20.97 |
| TraesCS7A01G559500.1 | Wheat | nucleus | 11.8 | 20.94 |
| KXG28890 | Sorghum | mitochondrion | 15.63 | 20.78 |
| AT1G31640.1 | Thale cress | mitochondrion | 28.02 | 20.47 |
| KXG28888 | Sorghum | nucleus | 15.34 | 20.39 |
| CDY38696 | Canola | nucleus | 16.52 | 20.14 |
| Os03t0582400-01 | Rice | nucleus | 14.75 | 20.08 |
| TraesCS6A01G359100.1 | Wheat | mitochondrion | 15.34 | 19.92 |
| TraesCS6B01G391800.1 | Wheat | mitochondrion | 15.34 | 19.92 |
| TraesCS6D01G342100.1 | Wheat | mitochondrion | 15.34 | 19.92 |
| Zm00001d016791_P001 | Maize | mitochondrion | 16.52 | 19.51 |
| TraesCS6A01G359700.1 | Wheat | nucleus | 12.98 | 19.38 |
| KXG38099 | Sorghum | plastid | 17.99 | 19.37 |
| TraesCS2D01G128000.1 | Wheat | nucleus | 12.09 | 19.34 |
| CDY18830 | Canola | nucleus | 19.47 | 19.19 |
| TraesCS7D01G550600.1 | Wheat | nucleus | 13.57 | 19.09 |
| TraesCS7D01G551000.1 | Wheat | nucleus | 12.98 | 18.64 |
| HORVU6Hr1G085570.1 | Barley | mitochondrion, nucleus | 14.16 | 18.46 |
| TraesCS7B01G484500.1 | Wheat | nucleus | 12.68 | 17.84 |
| EER91288 | Sorghum | mitochondrion, nucleus | 16.52 | 17.83 |
| TraesCS7A01G551000.1 | Wheat | nucleus | 15.93 | 17.25 |
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 12.09 | 17.01 |
| TraesCS7D01G536700.1 | Wheat | nucleus | 15.34 | 16.61 |
| TraesCS6D01G342700.1 | Wheat | nucleus | 14.45 | 15.86 |
| CDY05205 | Canola | cytosol, mitochondrion, nucleus | 7.37 | 15.34 |
| TraesCS6B01G392600.1 | Wheat | nucleus | 13.57 | 14.84 |
| TraesCS2D01G150900.1 | Wheat | mitochondrion | 12.98 | 14.33 |
| TraesCS7A01G398800.1 | Wheat | nucleus | 12.68 | 13.35 |
| TraesCS7B01G299400.1 | Wheat | nucleus | 12.68 | 13.31 |
| TraesCS7D01G393000.1 | Wheat | nucleus | 12.68 | 13.31 |
| TraesCS2B01G146100.1 | Wheat | nucleus | 14.16 | 13.22 |
| HORVU6Hr1G085670.1 | Barley | nucleus | 12.39 | 12.65 |
| TraesCS2A01G146400.1 | Wheat | mitochondrion | 12.98 | 12.36 |
| PGSC0003DMT400089615 | Potato | cytosol | 4.13 | 5.88 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | GO:A0A078JXY6 | UniProt:A0A078JXY6 | EnsemblPlants:CDY71564 | ProteinID:CDY71564 |
| ProteinID:CDY71564.1 | ncoils:Coil | GO:GO:0000982 | GO:GO:0000987 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00017238001 |
| InterPro:IPR002100 | InterPro:IPR036879 | InterPro:MADS_SRF-like | PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 |
| PANTHER:PTHR11945 | PANTHER:PTHR11945:SF355 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf |
| UniParc:UPI0004EE2CA7 | SEG:seg | : | : | : | : |
Description
BnaAnng37950DBnaAnng37950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JXY6]
Coordinates
chrLK046383:-:1300..2418
Molecular Weight (calculated)
38108.7 Da
IEP (calculated)
4.854
GRAVY (calculated)
-0.708
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRGRIKIEP MTNSTARNQT FRKRKKGLLK KANELSTLCG VKVCVVINSC DNTETEFWPS REGAEAVHSA FMGVLPEERC KKMYDQERHL EERIQKGQAK
101: AMRLQAENRE IELREVMFDL FKGETLKPHH YDDPCFIGEL NHFIGDYVKN LSHRIEFLEA NGEPVPPNVA ATDASGPFVV GTEGLVSNPT EAYDHMRQFD
201: GMDMSVKEEA PGGFNDHDLN MNLEEPFQYQ TPANFDDQTQ PMFYGSSQDM YTGLNHDQGQ SSNQYPNSNQ SFVGLLMGQP QQMSDGQDPA TVASMDDKNN
301: GYHQLLITSQ MPLTTTAAAA ADLSGHRIDN GWLTRFGLD
101: AMRLQAENRE IELREVMFDL FKGETLKPHH YDDPCFIGEL NHFIGDYVKN LSHRIEFLEA NGEPVPPNVA ATDASGPFVV GTEGLVSNPT EAYDHMRQFD
201: GMDMSVKEEA PGGFNDHDLN MNLEEPFQYQ TPANFDDQTQ PMFYGSSQDM YTGLNHDQGQ SSNQYPNSNQ SFVGLLMGQP QQMSDGQDPA TVASMDDKNN
301: GYHQLLITSQ MPLTTTAAAA ADLSGHRIDN GWLTRFGLD
001: MRGKMKLSFI ENDSVRKTTF TKRKKGMLKK FNELVTLCGV DACAVIRSPY NSIQEPWPSR EGVEEVMSKF MEFSVLDRTK KMVDQETFLR QRIAKETERL
101: QKLRDENRNS QIRDLMFGCL KGEVDVSHLH GRDLLDLNVF LNKYLNGVIR RVEILKENGE SSSSVPPPIG VAPTVVDASV PIGFDGRMIQ DQNQNQQEPV
201: QFQYQALYDF YDQIPKKLHD FNMKMNIDPN QSMNLDLNDG EDEGIPCMDN NNYHPEIDCL ATVTTAPTDV CAPNIINDL
101: QKLRDENRNS QIRDLMFGCL KGEVDVSHLH GRDLLDLNVF LNKYLNGVIR RVEILKENGE SSSSVPPPIG VAPTVVDASV PIGFDGRMIQ DQNQNQQEPV
201: QFQYQALYDF YDQIPKKLHD FNMKMNIDPN QSMNLDLNDG EDEGIPCMDN NNYHPEIDCL ATVTTAPTDV CAPNIINDL
Arabidopsis Description
PHE1MADS-box transcription factor PHERES 1 [Source:UniProtKB/Swiss-Prot;Acc:O80805]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.