Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020525.1-P | Field mustard | nucleus | 99.73 | 95.19 |
| CDY05333 | Canola | nucleus | 91.78 | 91.78 |
| CDY05514 | Canola | nucleus | 75.6 | 79.17 |
| CDY71896 | Canola | nucleus | 31.3 | 68.6 |
| CDY71564 | Canola | nucleus | 58.09 | 64.6 |
| CDY67043 | Canola | nucleus | 66.58 | 64.19 |
| CDY70782 | Canola | nucleus | 52.25 | 60.99 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 5.57 | 51.22 |
| CDX80577 | Canola | mitochondrion, nucleus | 35.01 | 43.85 |
| CDX88231 | Canola | nucleus | 31.83 | 43.48 |
| AT5G27960.1 | Thale cress | nucleus | 28.38 | 33.44 |
| AT5G26650.1 | Thale cress | nucleus | 31.83 | 32.79 |
| AT1G65330.1 | Thale cress | nucleus | 23.87 | 32.26 |
| CDY25000 | Canola | nucleus | 18.3 | 31.94 |
| CDY64992 | Canola | mitochondrion, nucleus | 13.0 | 31.82 |
| AT1G65300.1 | Thale cress | nucleus | 23.34 | 31.65 |
| CDY05540 | Canola | nucleus | 17.77 | 31.02 |
| AT5G26580.1 | Thale cress | nucleus | 28.38 | 31.01 |
| AT1G31630.1 | Thale cress | mitochondrion | 27.32 | 30.38 |
| CDY33537 | Canola | nucleus | 15.65 | 30.1 |
| CDX88234 | Canola | nucleus | 14.59 | 30.05 |
| CDX80580 | Canola | nucleus | 15.38 | 28.71 |
| HORVU6Hr1G003730.1 | Barley | nucleus | 6.37 | 28.24 |
| OQU83806 | Sorghum | nucleus | 13.0 | 28.0 |
| KXG28892 | Sorghum | nucleus | 13.53 | 27.57 |
| KXG28893 | Sorghum | nucleus | 12.2 | 27.38 |
| TraesCS3D01G138400.1 | Wheat | cytosol | 13.26 | 26.32 |
| CDY05207 | Canola | nucleus | 22.81 | 25.75 |
| EES10067 | Sorghum | mitochondrion | 14.06 | 25.73 |
| AT1G31640.1 | Thale cress | mitochondrion | 31.57 | 25.65 |
| TraesCS3B01G155200.1 | Wheat | cytosol | 13.26 | 25.64 |
| TraesCS6A01G020500.1 | Wheat | mitochondrion, nucleus | 10.61 | 25.64 |
| CDY27735 | Canola | nucleus | 18.04 | 25.47 |
| GSMUA_Achr3P05500_001 | Banana | nucleus | 14.85 | 25.34 |
| AT5G35120.1 | Thale cress | cytosol | 7.16 | 25.23 |
| GSMUA_AchrUn_... | Banana | nucleus | 15.38 | 24.89 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 15.12 | 24.78 |
| TraesCS7B01G484600.1 | Wheat | nucleus | 10.61 | 24.39 |
| TraesCS3A01G137500.1 | Wheat | cytosol | 12.73 | 24.12 |
| CDY27734 | Canola | nucleus | 21.22 | 23.81 |
| CDX97329 | Canola | nucleus | 18.3 | 23.79 |
| HORVU7Hr1G121600.1 | Barley | nucleus | 11.67 | 23.78 |
| CDY60402 | Canola | nucleus | 19.1 | 23.68 |
| Zm00001d048894_P001 | Maize | mitochondrion | 15.38 | 23.48 |
| CDY25744 | Canola | mitochondrion | 10.08 | 23.46 |
| TraesCS6D01G024000.1 | Wheat | mitochondrion, nucleus | 11.41 | 23.37 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 14.32 | 23.28 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 15.12 | 23.27 |
| KXG28889 | Sorghum | nucleus | 15.38 | 23.2 |
| TraesCS7D01G548500.1 | Wheat | plastid | 14.32 | 22.98 |
| TraesCS6D01G024300.1 | Wheat | mitochondrion | 13.79 | 22.91 |
| TraesCS6B01G028100.1 | Wheat | mitochondrion | 11.41 | 22.87 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 14.06 | 22.84 |
| TraesCS6A01G020900.1 | Wheat | mitochondrion | 12.73 | 22.75 |
| AT1G59930.1 | Thale cress | cytosol | 7.96 | 22.73 |
| KXG32310 | Sorghum | nucleus | 14.59 | 22.73 |
| TraesCS7A01G559500.1 | Wheat | nucleus | 11.41 | 22.51 |
| TraesCS6B01G027900.1 | Wheat | nucleus | 13.53 | 22.47 |
| TraesCS6B01G028300.1 | Wheat | mitochondrion | 12.47 | 22.27 |
| PGSC0003DMT400003073 | Potato | cytosol | 6.37 | 22.22 |
| TraesCS7A01G561000.1 | Wheat | nucleus | 13.79 | 22.22 |
| TraesCS7B01G485400.1 | Wheat | nucleus | 13.79 | 22.22 |
| TraesCS7D01G550500.1 | Wheat | nucleus | 10.88 | 22.16 |
| TraesCS6A01G022700.1 | Wheat | mitochondrion | 13.26 | 22.03 |
| TraesCS6D01G023800.1 | Wheat | mitochondrion | 13.26 | 22.03 |
| EES06917 | Sorghum | mitochondrion, nucleus | 14.85 | 21.62 |
| TraesCS3B01G159600.1 | Wheat | nucleus | 14.32 | 21.51 |
| HORVU2Hr1G022060.1 | Barley | nucleus, plastid | 11.67 | 21.46 |
| HORVU6Hr1G085540.1 | Barley | mitochondrion | 12.73 | 20.96 |
| Os03t0582400-01 | Rice | nucleus | 13.79 | 20.88 |
| OQU83804 | Sorghum | mitochondrion | 13.0 | 20.85 |
| TraesCS7B01G484000.1 | Wheat | nucleus | 10.08 | 20.54 |
| CDY38696 | Canola | nucleus | 15.12 | 20.5 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 15.12 | 20.5 |
| TraesCS6B01G391600.1 | Wheat | nucleus | 13.26 | 20.41 |
| TraesCS6B01G391700.1 | Wheat | nucleus | 13.26 | 20.41 |
| KXG28890 | Sorghum | mitochondrion | 13.79 | 20.39 |
| CDY04801 | Canola | mitochondrion, nucleus | 8.75 | 20.37 |
| TraesCS6D01G342000.1 | Wheat | nucleus | 13.0 | 20.33 |
| TraesCS3A01G312600.1 | Wheat | nucleus | 13.53 | 20.32 |
| KXG28888 | Sorghum | nucleus | 13.53 | 20.0 |
| CDY21372 | Canola | mitochondrion | 8.49 | 19.75 |
| TraesCS6A01G359100.1 | Wheat | mitochondrion | 13.53 | 19.54 |
| TraesCS6B01G391800.1 | Wheat | mitochondrion | 13.53 | 19.54 |
| Zm00001d016791_P001 | Maize | mitochondrion | 14.85 | 19.51 |
| TraesCS6D01G341700.1 | Wheat | nucleus | 12.47 | 19.5 |
| TraesCS2B01G171700.1 | Wheat | mitochondrion | 9.81 | 19.37 |
| TraesCS6D01G342100.1 | Wheat | mitochondrion | 13.26 | 19.16 |
| TraesCS6A01G358900.1 | Wheat | nucleus | 11.94 | 19.07 |
| CDY18830 | Canola | nucleus | 16.98 | 18.6 |
| TraesCS6D01G341800.1 | Wheat | mitochondrion, nucleus | 12.2 | 18.55 |
| HORVU6Hr1G085570.1 | Barley | mitochondrion, nucleus | 12.73 | 18.46 |
| TraesCS7D01G551000.1 | Wheat | nucleus | 11.41 | 18.22 |
| TraesCS6A01G359700.1 | Wheat | nucleus | 10.88 | 18.06 |
| TraesCS7D01G550600.1 | Wheat | nucleus | 11.41 | 17.84 |
| TraesCS7B01G484500.1 | Wheat | nucleus | 11.14 | 17.43 |
| KXG38099 | Sorghum | plastid | 14.32 | 17.14 |
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 10.88 | 17.01 |
| CDY05205 | Canola | cytosol, mitochondrion, nucleus | 7.16 | 16.56 |
| EER91288 | Sorghum | mitochondrion, nucleus | 13.53 | 16.24 |
| TraesCS2D01G128000.1 | Wheat | nucleus | 9.02 | 16.04 |
| TraesCS7A01G551000.1 | Wheat | nucleus | 12.47 | 15.02 |
| TraesCS7D01G536700.1 | Wheat | nucleus | 12.2 | 14.7 |
| TraesCS2D01G150900.1 | Wheat | mitochondrion | 11.94 | 14.66 |
| TraesCS6D01G342700.1 | Wheat | nucleus | 11.67 | 14.24 |
| TraesCS7A01G398800.1 | Wheat | nucleus | 11.67 | 13.66 |
| TraesCS7B01G299400.1 | Wheat | nucleus | 11.67 | 13.62 |
| TraesCS6B01G392600.1 | Wheat | nucleus | 11.14 | 13.55 |
| TraesCS7D01G393000.1 | Wheat | nucleus | 11.41 | 13.31 |
| TraesCS2B01G146100.1 | Wheat | nucleus | 12.73 | 13.22 |
| TraesCS2A01G146400.1 | Wheat | mitochondrion | 12.2 | 12.92 |
| HORVU6Hr1G085670.1 | Barley | nucleus | 10.08 | 11.45 |
| PGSC0003DMT400089615 | Potato | cytosol | 5.57 | 8.82 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | GO:A0A078ETY8 | EnsemblPlants:CDY05515 | ProteinID:CDY05515 | ProteinID:CDY05515.1 |
| GO:GO:0000982 | GO:GO:0000987 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00120455001 | InterPro:IPR002100 | InterPro:IPR036879 |
| InterPro:MADS_SRF-like | PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF355 |
| SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI0004EF35F8 | SEG:seg |
Description
BnaA02g31760D
Coordinates
chrLK031962:-:618633..619814
Molecular Weight (calculated)
42578.0 Da
IEP (calculated)
6.088
GRAVY (calculated)
-0.742
Length
377 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTRGRLKLN FIDNKSARNQ TFKKRTRGFM KKAKELSTLC GIKVSAVIKS CDNAEPEFWP SREGAEAVHS EFMKVVETQG FSKMHNHESY LLERIQKDGE
101: KARRLHAENR EIELREVMFD LLKGKTLMPH QYGDPSFMRE LNLFIGGYAN RVTYRTQFLE GSVEPVPPNF AGANAHGPVV DDVNPVVVGT EGSVINPTEA
201: YDHMPQYDGM DMSVNVETQP WFNGSSQGMN VNHQEPFQYQ TPPNSYDHIQ PMFNGSSQGM NMKYEEPFQY QPHGNLYDQM QPMFYGSSQD MYTGLSHDQG
301: QSSNTTQQFM SLLMGRPQQM SDVQDLASVA SMDDNNNRYQ QLPVTSQMPS TTTTTTAAAN LSGHSINNGW PTKFGLD
101: KARRLHAENR EIELREVMFD LLKGKTLMPH QYGDPSFMRE LNLFIGGYAN RVTYRTQFLE GSVEPVPPNF AGANAHGPVV DDVNPVVVGT EGSVINPTEA
201: YDHMPQYDGM DMSVNVETQP WFNGSSQGMN VNHQEPFQYQ TPPNSYDHIQ PMFNGSSQGM NMKYEEPFQY QPHGNLYDQM QPMFYGSSQD MYTGLSHDQG
301: QSSNTTQQFM SLLMGRPQQM SDVQDLASVA SMDDNNNRYQ QLPVTSQMPS TTTTTTAAAN LSGHSINNGW PTKFGLD
001: MKKVKLSLIA NERSRKTSFI KRKDGIFKKL HELSTLCGVQ ACALIYSPFI PVPESWPSRE GAKKVASRFL EMPPTARTKK MMDQETYLME RITKAKEQLK
101: NLAAENRELQ VRRFMFDCVE GKMSQYHYDA KDLQDLQSCI NLYLDQLNGR IESIKENGES LLSSVSPFPT RIGVDEIGDE SFSDSPIHAT TGVVDTLNAT
201: NPHVLTGDMT PFLDADATAV TASSRFFDHI PYENMNMSQN LHEPFQHLVP TNVCDFFQNQ NMNQVQYQAP NNLFNQIQRE FYNINLNLNL NLNSNQYLNQ
301: QQSFMNPMVE QHMNHVGGRE SIPFVDGNCY NYHQLPSNQL PAVDHASTSY MPSTTGVYDP YINNNL
101: NLAAENRELQ VRRFMFDCVE GKMSQYHYDA KDLQDLQSCI NLYLDQLNGR IESIKENGES LLSSVSPFPT RIGVDEIGDE SFSDSPIHAT TGVVDTLNAT
201: NPHVLTGDMT PFLDADATAV TASSRFFDHI PYENMNMSQN LHEPFQHLVP TNVCDFFQNQ NMNQVQYQAP NNLFNQIQRE FYNINLNLNL NLNSNQYLNQ
301: QQSFMNPMVE QHMNHVGGRE SIPFVDGNCY NYHQLPSNQL PAVDHASTSY MPSTTGVYDP YINNNL
Arabidopsis Description
AGL36Agamous-like MADS-box protein AGL36 [Source:UniProtKB/Swiss-Prot;Acc:Q7XJK6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.