Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009913.1-P | Field mustard | nucleus | 100.0 | 90.15 |
| CDX80580 | Canola | nucleus | 92.9 | 84.16 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 10.93 | 48.78 |
| CDY25000 | Canola | nucleus | 56.28 | 47.69 |
| CDY05540 | Canola | nucleus | 55.19 | 46.76 |
| AT5G26630.1 | Thale cress | nucleus | 55.19 | 46.33 |
| CDY33537 | Canola | nucleus | 37.7 | 35.2 |
| HORVU6Hr1G003730.1 | Barley | nucleus | 15.3 | 32.94 |
| CDY64992 | Canola | mitochondrion, nucleus | 27.32 | 32.47 |
| CDY71896 | Canola | nucleus | 29.51 | 31.4 |
| TraesCS6A01G020500.1 | Wheat | mitochondrion, nucleus | 24.59 | 28.85 |
| TraesCS7B01G484600.1 | Wheat | nucleus | 24.04 | 26.83 |
| CDX97329 | Canola | nucleus | 39.89 | 25.17 |
| EES10067 | Sorghum | mitochondrion | 27.87 | 24.76 |
| GSMUA_Achr3P05500_001 | Banana | nucleus | 29.51 | 24.43 |
| CDY60402 | Canola | nucleus | 40.44 | 24.34 |
| TraesCS3D01G138400.1 | Wheat | cytosol | 25.14 | 24.21 |
| PGSC0003DMT400003073 | Potato | cytosol | 14.21 | 24.07 |
| OQU83806 | Sorghum | nucleus | 22.95 | 24.0 |
| KXG28893 | Sorghum | nucleus | 21.86 | 23.81 |
| KXG28892 | Sorghum | nucleus | 24.04 | 23.78 |
| TraesCS3B01G155200.1 | Wheat | cytosol | 25.14 | 23.59 |
| TraesCS2B01G171700.1 | Wheat | mitochondrion | 24.59 | 23.56 |
| TraesCS7A01G559500.1 | Wheat | nucleus | 24.59 | 23.56 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 29.51 | 23.48 |
| CDY25744 | Canola | mitochondrion | 20.77 | 23.46 |
| TraesCS7D01G550500.1 | Wheat | nucleus | 23.5 | 23.24 |
| TraesCS3A01G137500.1 | Wheat | cytosol | 25.14 | 23.12 |
| CDY04801 | Canola | mitochondrion, nucleus | 20.22 | 22.84 |
| CDY21372 | Canola | mitochondrion | 20.22 | 22.84 |
| TraesCS7B01G484000.1 | Wheat | nucleus | 22.95 | 22.7 |
| TraesCS6B01G391600.1 | Wheat | nucleus | 30.05 | 22.45 |
| TraesCS6B01G391700.1 | Wheat | nucleus | 30.05 | 22.45 |
| TraesCS3B01G159600.1 | Wheat | nucleus | 30.6 | 22.31 |
| TraesCS7D01G548500.1 | Wheat | plastid | 28.42 | 22.13 |
| TraesCS3A01G312600.1 | Wheat | nucleus | 30.05 | 21.91 |
| CDX88231 | Canola | nucleus | 32.79 | 21.74 |
| TraesCS6D01G024000.1 | Wheat | mitochondrion, nucleus | 21.86 | 21.74 |
| CDY27735 | Canola | nucleus | 31.69 | 21.72 |
| Os03t0582400-01 | Rice | nucleus | 29.51 | 21.69 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 27.32 | 21.55 |
| TraesCS7B01G485400.1 | Wheat | nucleus | 27.32 | 21.37 |
| CDY05207 | Canola | nucleus | 38.8 | 21.26 |
| HORVU7Hr1G121600.1 | Barley | nucleus | 21.31 | 21.08 |
| TraesCS6A01G359100.1 | Wheat | mitochondrion | 30.05 | 21.07 |
| TraesCS6B01G391800.1 | Wheat | mitochondrion | 30.05 | 21.07 |
| GSMUA_AchrUn_... | Banana | nucleus | 26.78 | 21.03 |
| TraesCS7A01G561000.1 | Wheat | nucleus | 26.78 | 20.94 |
| CDX80577 | Canola | mitochondrion, nucleus | 34.43 | 20.93 |
| CDY27734 | Canola | nucleus | 38.25 | 20.83 |
| KXG28889 | Sorghum | nucleus | 28.42 | 20.8 |
| TraesCS6A01G358900.1 | Wheat | nucleus | 26.78 | 20.76 |
| TraesCS6B01G027900.1 | Wheat | nucleus | 25.68 | 20.7 |
| TraesCS6D01G023800.1 | Wheat | mitochondrion | 25.68 | 20.7 |
| TraesCS6D01G342100.1 | Wheat | mitochondrion | 29.51 | 20.69 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 27.32 | 20.41 |
| TraesCS6D01G341700.1 | Wheat | nucleus | 26.78 | 20.33 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 25.68 | 20.26 |
| TraesCS6B01G028100.1 | Wheat | mitochondrion | 20.77 | 20.21 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 30.6 | 20.14 |
| HORVU6Hr1G085540.1 | Barley | mitochondrion | 25.14 | 20.09 |
| OQU83804 | Sorghum | mitochondrion | 25.68 | 20.0 |
| TraesCS6D01G342000.1 | Wheat | nucleus | 26.23 | 19.92 |
| Zm00001d048894_P001 | Maize | mitochondrion | 26.78 | 19.84 |
| KXG32310 | Sorghum | nucleus | 26.23 | 19.83 |
| TraesCS6D01G024300.1 | Wheat | mitochondrion | 24.59 | 19.82 |
| HORVU6Hr1G085570.1 | Barley | mitochondrion, nucleus | 27.87 | 19.62 |
| TraesCS6B01G028300.1 | Wheat | mitochondrion | 22.4 | 19.43 |
| EES06917 | Sorghum | mitochondrion, nucleus | 27.32 | 19.3 |
| KXG28888 | Sorghum | nucleus | 26.78 | 19.22 |
| KXG28890 | Sorghum | mitochondrion | 26.78 | 19.22 |
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 25.14 | 19.09 |
| CDY38696 | Canola | nucleus | 28.96 | 19.06 |
| TraesCS6A01G020900.1 | Wheat | mitochondrion | 21.86 | 18.96 |
| TraesCS6A01G022700.1 | Wheat | mitochondrion | 23.5 | 18.94 |
| TraesCS7B01G484500.1 | Wheat | nucleus | 24.59 | 18.67 |
| TraesCS7D01G551000.1 | Wheat | nucleus | 24.04 | 18.64 |
| TraesCS6D01G341800.1 | Wheat | mitochondrion, nucleus | 25.14 | 18.55 |
| HORVU2Hr1G022060.1 | Barley | nucleus, plastid | 20.77 | 18.54 |
| Zm00001d016791_P001 | Maize | mitochondrion | 28.96 | 18.47 |
| TraesCS7D01G550600.1 | Wheat | nucleus | 24.04 | 18.26 |
| TraesCS2D01G128000.1 | Wheat | nucleus | 20.22 | 17.45 |
| TraesCS6A01G359700.1 | Wheat | nucleus | 21.31 | 17.18 |
| CDY18830 | Canola | nucleus | 32.24 | 17.15 |
| KXG38099 | Sorghum | plastid | 28.96 | 16.83 |
| CDY71564 | Canola | nucleus | 31.15 | 16.81 |
| CDY70782 | Canola | nucleus | 29.51 | 16.72 |
| EER91288 | Sorghum | mitochondrion, nucleus | 25.68 | 14.97 |
| CDY05333 | Canola | nucleus | 30.6 | 14.85 |
| CDY05515 | Canola | nucleus | 30.05 | 14.59 |
| CDY05205 | Canola | cytosol, mitochondrion, nucleus | 12.57 | 14.11 |
| CDY67043 | Canola | nucleus | 28.96 | 13.55 |
| TraesCS7A01G551000.1 | Wheat | nucleus | 22.95 | 13.42 |
| TraesCS7D01G536700.1 | Wheat | nucleus | 22.95 | 13.42 |
| TraesCS6D01G342700.1 | Wheat | nucleus | 22.4 | 13.27 |
| TraesCS6B01G392600.1 | Wheat | nucleus | 21.31 | 12.58 |
| TraesCS7B01G299400.1 | Wheat | nucleus | 21.31 | 12.07 |
| TraesCS2D01G150900.1 | Wheat | mitochondrion | 20.22 | 12.05 |
| CDY05514 | Canola | nucleus | 23.5 | 11.94 |
| TraesCS7A01G398800.1 | Wheat | nucleus | 20.77 | 11.8 |
| TraesCS7D01G393000.1 | Wheat | nucleus | 20.77 | 11.76 |
| HORVU6Hr1G085670.1 | Barley | nucleus | 20.22 | 11.14 |
| TraesCS2A01G146400.1 | Wheat | mitochondrion | 20.77 | 10.67 |
| TraesCS2B01G146100.1 | Wheat | nucleus | 19.13 | 9.64 |
| PGSC0003DMT400089615 | Potato | cytosol | 1.09 | 0.84 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | GO:A0A078DIA5 | EnsemblPlants:CDX88234 | ProteinID:CDX88234 | ProteinID:CDX88234.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00147713001 | InterPro:IPR002100 | InterPro:IPR036879 | PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 |
| PANTHER:PTHR11945 | PANTHER:PTHR11945:SF355 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf |
| UniParc:UPI0004EE08A5 | SEG:seg | : | : | : | : |
Description
BnaA06g28250D
Coordinates
chrLK031854:+:1561421..1562026
Molecular Weight (calculated)
20534.7 Da
IEP (calculated)
8.305
GRAVY (calculated)
-0.543
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MTRNRVKMAY IENETSRKTT FRKRKGGIMK KALELSTLCD VPIAVFVQSE YNSVPELSLV EKTKKMMNQE QFIQQRITKA TESCKKVAKE NKELAMKEVM
101: YDCLRGDNAP CNLDEDELRD LGGVIDQYIK GLNRRIQVLM KDHASSSTSV VPDAAAAAVA MPTAEMGSSS NVKDFDLNQT QSE
101: YDCLRGDNAP CNLDEDELRD LGGVIDQYIK GLNRRIQVLM KDHASSSTSV VPDAAAAAVA MPTAEMGSSS NVKDFDLNQT QSE
001: MTRQKVKMTF IENETARKST FKKRKKGLLK KAQELGILCG VPIFAVVNSP YELNPEVWPS REAANQVVSQ WKTMSVMDKT KKMVNQETFL QQRITKATES
101: WKKLRKENKE LEMKNIMFDC LSGKTLVSSI EKTELRDFGY VIEQQLKDVN RRIEILKRNN EPSSALVPVA APTTSSVMPV VEMGSSSVGF YDKVRDQIQI
201: TLNMKQTTND LDLNKKQW
101: WKKLRKENKE LEMKNIMFDC LSGKTLVSSI EKTELRDFGY VIEQQLKDVN RRIEILKRNN EPSSALVPVA APTTSSVMPV VEMGSSSVGF YDKVRDQIQI
201: TLNMKQTTND LDLNKKQW
Arabidopsis Description
MADS-box protein AGL35 [Source:UniProtKB/TrEMBL;Acc:Q7XJK7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.