Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G484000.1 | Wheat | nucleus | 93.9 | 83.24 |
| TraesCS7D01G550500.1 | Wheat | nucleus | 88.41 | 78.38 |
| TraesCS7A01G559500.1 | Wheat | nucleus | 88.41 | 75.92 |
| TraesCS7B01G484500.1 | Wheat | nucleus | 77.44 | 52.7 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 12.8 | 51.22 |
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 74.39 | 50.62 |
| TraesCS6B01G391600.1 | Wheat | nucleus | 62.8 | 42.04 |
| TraesCS6B01G391700.1 | Wheat | nucleus | 62.8 | 42.04 |
| TraesCS6B01G028100.1 | Wheat | mitochondrion | 47.56 | 41.49 |
| TraesCS6B01G391800.1 | Wheat | mitochondrion | 61.59 | 38.7 |
| TraesCS6B01G028300.1 | Wheat | mitochondrion | 48.17 | 37.44 |
| TraesCS2B01G171700.1 | Wheat | mitochondrion | 43.29 | 37.17 |
| TraesCS3B01G159600.1 | Wheat | nucleus | 54.88 | 35.86 |
| TraesCS6B01G027900.1 | Wheat | nucleus | 49.39 | 35.68 |
| KRG88863 | Soybean | mitochondrion, nucleus | 26.22 | 30.71 |
| Bra012335.1-P | Field mustard | mitochondrion | 29.88 | 30.25 |
| CDY25744 | Canola | mitochondrion | 29.88 | 30.25 |
| PGSC0003DMT400086956 | Potato | nucleus | 26.83 | 29.93 |
| TraesCS3B01G155200.1 | Wheat | cytosol | 35.37 | 29.74 |
| Bra024521.1-P | Field mustard | mitochondrion | 28.66 | 29.01 |
| CDY21372 | Canola | mitochondrion | 28.66 | 29.01 |
| AT1G22590.2 | Thale cress | mitochondrion, nucleus | 28.66 | 28.83 |
| CDY04801 | Canola | mitochondrion, nucleus | 28.05 | 28.4 |
| KRH33740 | Soybean | nucleus | 27.44 | 28.3 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 39.63 | 28.26 |
| TraesCS7B01G485400.1 | Wheat | nucleus | 39.63 | 27.78 |
| PGSC0003DMT400089787 | Potato | cytosol | 29.27 | 27.59 |
| KRG89836 | Soybean | nucleus | 25.0 | 27.52 |
| KRH30113 | Soybean | nucleus | 28.66 | 27.49 |
| GSMUA_AchrUn_... | Banana | nucleus | 39.02 | 27.47 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 38.41 | 27.16 |
| EES06917 | Sorghum | mitochondrion, nucleus | 42.68 | 27.03 |
| KRH72060 | Soybean | nucleus | 28.05 | 26.9 |
| CDY33537 | Canola | nucleus | 31.71 | 26.53 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 43.9 | 25.9 |
| TraesCS7B01G299400.1 | Wheat | nucleus | 50.61 | 25.7 |
| Bra005166.1-P | Field mustard | mitochondrion, nucleus | 19.51 | 25.6 |
| CDY64992 | Canola | mitochondrion, nucleus | 23.78 | 25.32 |
| VIT_14s0060g00300.t01 | Wine grape | nucleus | 35.37 | 24.58 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 34.76 | 24.57 |
| Zm00001d016791_P001 | Maize | mitochondrion | 42.68 | 24.39 |
| CDX80580 | Canola | nucleus | 29.88 | 24.26 |
| KRH30119 | Soybean | cytosol | 23.78 | 24.22 |
| Bra009913.1-P | Field mustard | nucleus | 29.88 | 24.14 |
| CDX88234 | Canola | nucleus | 26.83 | 24.04 |
| KRG98150 | Soybean | mitochondrion, nucleus | 24.39 | 23.95 |
| KXG38099 | Sorghum | plastid | 44.51 | 23.17 |
| KRG98149 | Soybean | nucleus | 29.88 | 23.0 |
| Solyc01g102260.2.1 | Tomato | nucleus | 34.76 | 22.89 |
| AT5G27810.1 | Thale cress | cytosol, nucleus, plastid | 16.46 | 22.69 |
| KRG98152 | Soybean | nucleus | 26.22 | 22.63 |
| KRG97962 | Soybean | nucleus | 32.93 | 22.59 |
| AT5G26630.1 | Thale cress | nucleus | 29.88 | 22.48 |
| KRH30919 | Soybean | nucleus | 32.93 | 22.31 |
| PGSC0003DMT400003073 | Potato | cytosol | 14.63 | 22.22 |
| CDY71896 | Canola | nucleus | 23.17 | 22.09 |
| KRH30476 | Soybean | nucleus | 20.12 | 22.0 |
| TraesCS6B01G392600.1 | Wheat | nucleus | 41.46 | 21.94 |
| KRG98143 | Soybean | nucleus | 28.05 | 21.8 |
| KRH66114 | Soybean | nucleus | 26.22 | 21.72 |
| KRH66052 | Soybean | mitochondrion, nucleus | 29.27 | 21.33 |
| KRH30472 | Soybean | nucleus | 27.44 | 21.23 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 31.1 | 20.82 |
| AT5G35120.1 | Thale cress | cytosol | 13.41 | 20.56 |
| PGSC0003DMT400087890 | Potato | cytosol | 14.02 | 20.54 |
| KRG98148 | Soybean | nucleus | 28.66 | 20.52 |
| EER91288 | Sorghum | mitochondrion, nucleus | 39.02 | 20.38 |
| TraesCS2B01G146100.1 | Wheat | nucleus | 44.51 | 20.11 |
| PGSC0003DMT400090586 | Potato | nucleus | 28.05 | 19.57 |
| CDY25000 | Canola | nucleus | 25.61 | 19.44 |
| KRH30473 | Soybean | mitochondrion, nucleus | 25.61 | 19.0 |
| Bra020555.1-P | Field mustard | nucleus | 25.0 | 18.98 |
| CDY05540 | Canola | nucleus | 25.0 | 18.98 |
| KRG88915 | Soybean | mitochondrion, nucleus | 23.78 | 18.84 |
| AT1G59930.1 | Thale cress | cytosol | 14.63 | 18.18 |
| Bra018490.1-P | Field mustard | nucleus | 31.71 | 17.93 |
| CDX97329 | Canola | nucleus | 31.71 | 17.93 |
| KRH72066 | Soybean | mitochondrion, nucleus | 21.95 | 17.48 |
| Bra029469.1-P | Field mustard | nucleus | 32.32 | 17.43 |
| CDY60402 | Canola | nucleus | 32.32 | 17.43 |
| PGSC0003DMT400088489 | Potato | nucleus | 22.56 | 17.37 |
| AT1G65300.1 | Thale cress | nucleus | 29.27 | 17.27 |
| PGSC0003DMT400073719 | Potato | nucleus | 27.44 | 17.24 |
| KRG98142 | Soybean | nucleus | 28.05 | 17.23 |
| PGSC0003DMT400089454 | Potato | nucleus | 25.61 | 17.14 |
| PGSC0003DMT400091650 | Potato | nucleus | 26.83 | 16.99 |
| KRG98147 | Soybean | mitochondrion, nucleus | 26.22 | 16.73 |
| AT3G05860.1 | Thale cress | nucleus | 26.22 | 16.54 |
| PGSC0003DMT400095417 | Potato | cytosol | 12.8 | 16.41 |
| PGSC0003DMT400095062 | Potato | nucleus | 28.05 | 16.31 |
| AT5G48670.1 | Thale cress | nucleus | 31.1 | 15.89 |
| PGSC0003DMT400061726 | Potato | nucleus | 31.1 | 15.6 |
| KRG88914 | Soybean | cytosol | 20.73 | 15.53 |
| AT1G65330.1 | Thale cress | nucleus | 25.61 | 15.05 |
| PGSC0003DMT400088654 | Potato | nucleus | 29.88 | 14.98 |
| CDY27735 | Canola | nucleus | 24.39 | 14.98 |
| KRH30471 | Soybean | nucleus | 27.44 | 14.85 |
| CDY38696 | Canola | nucleus | 25.0 | 14.75 |
| CDX80577 | Canola | mitochondrion, nucleus | 26.83 | 14.62 |
| Bra035448.1-P | Field mustard | nucleus | 23.17 | 14.39 |
| Bra035449.1-P | Field mustard | nucleus | 23.17 | 14.39 |
| KRG88862 | Soybean | nucleus | 27.44 | 14.38 |
| CDX88231 | Canola | nucleus | 23.78 | 14.13 |
| PGSC0003DMT400088008 | Potato | nucleus | 16.46 | 13.99 |
| CDY27734 | Canola | nucleus | 28.05 | 13.69 |
| PGSC0003DMT400090953 | Potato | nucleus | 28.05 | 13.69 |
| PGSC0003DMT400061724 | Potato | mitochondrion, nucleus | 31.71 | 13.58 |
| Bra039404.1-P | Field mustard | nucleus | 25.0 | 13.58 |
| Bra041022.1-P | Field mustard | nucleus | 27.44 | 13.47 |
| KRG98146 | Soybean | nucleus | 26.83 | 13.41 |
| CDY05207 | Canola | nucleus | 26.83 | 13.17 |
| CDY18830 | Canola | nucleus | 26.83 | 12.79 |
| PGSC0003DMT400095755 | Potato | nucleus | 26.83 | 12.79 |
| AT2G28700.1 | Thale cress | nucleus | 25.61 | 12.77 |
| PGSC0003DMT400095426 | Potato | mitochondrion | 26.83 | 12.61 |
| AT5G27960.1 | Thale cress | nucleus | 24.39 | 12.5 |
| Bra009911.1-P | Field mustard | mitochondrion, nucleus | 26.83 | 12.09 |
| PGSC0003DMT400077258 | Potato | nucleus | 28.05 | 11.79 |
| CDY70782 | Canola | nucleus | 23.17 | 11.76 |
| CDY71564 | Canola | nucleus | 23.78 | 11.5 |
| PGSC0003DMT400090516 | Potato | nucleus | 12.2 | 11.3 |
| AT5G26650.1 | Thale cress | nucleus | 25.0 | 11.2 |
| Bra020552.1-P | Field mustard | nucleus | 23.17 | 11.14 |
| PGSC0003DMT400086447 | Potato | cytosol | 12.8 | 10.94 |
| AT1G31630.1 | Thale cress | mitochondrion | 22.56 | 10.91 |
| PGSC0003DMT400085256 | Potato | nucleus | 25.0 | 10.85 |
| AT5G26580.1 | Thale cress | nucleus | 22.56 | 10.72 |
| Bra040248.1-P | Field mustard | nucleus | 26.83 | 10.65 |
| CDY05515 | Canola | nucleus | 24.39 | 10.61 |
| CDY05333 | Canola | nucleus | 23.78 | 10.34 |
| Bra020550.1-P | Field mustard | nucleus | 23.17 | 10.0 |
| Bra020525.1-P | Field mustard | nucleus | 23.78 | 9.87 |
| CDY67043 | Canola | nucleus | 22.56 | 9.46 |
| AT1G31640.1 | Thale cress | mitochondrion | 26.22 | 9.27 |
| PGSC0003DMT400085623 | Potato | nucleus | 10.98 | 9.0 |
| Solyc07g043080.1.1 | Tomato | cytosol | 6.71 | 8.87 |
| Bra020524.1-P | Field mustard | nucleus | 17.68 | 8.06 |
| CDY05514 | Canola | nucleus | 17.68 | 8.06 |
| PGSC0003DMT400086919 | Potato | nucleus | 10.98 | 7.32 |
| PGSC0003DMT400085114 | Potato | cytosol, endoplasmic reticulum, nucleus | 12.2 | 7.09 |
| PGSC0003DMT400094378 | Potato | nucleus | 4.88 | 5.13 |
| PGSC0003DMT400094113 | Potato | cytosol | 4.88 | 4.62 |
| CDY05205 | Canola | cytosol, mitochondrion, nucleus | 4.27 | 4.29 |
| PGSC0003DMT400089615 | Potato | cytosol | 1.83 | 1.26 |
| PGSC0003DMT400061722 | Potato | plastid | 0.0 | 0.0 |
| PGSC0003DMT400065010 | Potato | vacuole | 0.0 | 0.0 |
| PGSC0003DMT400085093 | Potato | extracellular, plastid, vacuole | 0.0 | 0.0 |
| PGSC0003DMT400091747 | Potato | plastid | 0.0 | 0.0 |
| PGSC0003DMT400097522 | Potato | cytosol, extracellular, mitochondrion, nucleus | 0.0 | 0.0 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | ncoils:Coil | GO:GO:0000982 | GO:GO:0000987 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 |
| InterPro:IPR002100 | InterPro:IPR036879 | InterPro:MADS_SRF-like | PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 |
| PANTHER:PTHR11945 | PANTHER:PTHR11945:SF153 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf |
| EnsemblPlantsGene:TraesCS7B01G484600 | EnsemblPlants:TraesCS7B01G484600.1 | TIGR:cd00266 | : | : | : |
Description
No Description!
Coordinates
chr7B:-:741619192..741619686
Molecular Weight (calculated)
18669.9 Da
IEP (calculated)
9.196
GRAVY (calculated)
-0.446
Length
164 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRNVTLKYI PHDSTRRDRF KKRLKGLMKK ADELAILCDG KTCVLVYEEG KAAPEVFPSH AEAVGILNQF KSLPELGLCK EAMNQESFIT KRIEKLQDQI
101: DKTRRECEDS ETRYLLHKIM HGDPSVLVGL NIEQLIKVGY KVDVLLKSIT ERMAKIHSHG PPAT
101: DKTRRECEDS ETRYLLHKIM HGDPSVLVGL NIEQLIKVGY KVDVLLKSIT ERMAKIHSHG PPAT
001: MGRRKVTHQL ISDNATRRVT FRKRKDGLLK KIYELTVLCG LPACAIIYSE YKDGPELWPN LNEVRSILNR LSELPVEKQT KYMMDQKDLM NKMIQDAEKK
101: LEKEKMHTRA MKLGLMAGSN DLITDTDCSE ELARAADVVD KKLKAIRERI KAVEAGAPII KRD
101: LEKEKMHTRA MKLGLMAGSN DLITDTDCSE ELARAADVVD KKLKAIRERI KAVEAGAPII KRD
Arabidopsis Description
AGL87AGAMOUS-like 87 [Source:UniProtKB/TrEMBL;Acc:Q7X9H1]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.